RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 UPK3BL1B0FP48 263 aa21.49■■□□□ 1.03
ATG4D-212ENST00000590096 UPK3BL2E5RIL1 263 aa21.49■■□□□ 1.03
ATG4D-212ENST00000590096 KCNK3O14649 394 aa21.49■■□□□ 1.03
ATG4D-212ENST00000590096 KHNYNO15037 678 aaKnown RBP21.49■■□□□ 1.03
ATG4D-212ENST00000590096 TSPAN6O43657 245 aa21.49■■□□□ 1.03
ATG4D-212ENST00000590096 FOXD2O60548 495 aaPredicted RBP21.49■■□□□ 1.03
ATG4D-212ENST00000590096 MSNP26038 577 aaKnown RBP21.49■■□□□ 1.03
ATG4D-212ENST00000590096 MAT2AP31153 395 aaKnown RBP21.49■■□□□ 1.03
ATG4D-212ENST00000590096 NUDT1P36639 197 aa21.49■■□□□ 1.03
ATG4D-212ENST00000590096 EIF3EP60228 445 aaKnown RBP21.49■■□□□ 1.03
ATG4D-212ENST00000590096 POLR2LP62875 67 aaKnown RBP21.49■■□□□ 1.03
ATG4D-212ENST00000590096 DSC2Q02487 901 aa21.49■■□□□ 1.03
ATG4D-212ENST00000590096 ELP6Q0PNE2 266 aa21.49■■□□□ 1.03
ATG4D-212ENST00000590096 UGP2Q16851 508 aa21.49■■□□□ 1.03
ATG4D-212ENST00000590096 SETMARQ53H47 684 aaPredicted RBP21.49■■□□□ 1.03
ATG4D-212ENST00000590096 SLC45A4Q5BKX6 768 aa21.49■■□□□ 1.03
ATG4D-212ENST00000590096 LRRC73Q5JTD7 316 aa21.49■■□□□ 1.03
ATG4D-212ENST00000590096 KIAA1161Q6NSJ0 714 aa21.49■■□□□ 1.03
ATG4D-212ENST00000590096 ERAP2Q6P179 960 aa21.49■■□□□ 1.03
ATG4D-212ENST00000590096 HORMAD1Q86X24 394 aa21.49■■□□□ 1.03
ATG4D-212ENST00000590096 ZCCHC9Q8N567 271 aaKnown RBP21.49■■□□□ 1.03
ATG4D-212ENST00000590096 C12orf50Q8NA57 414 aaPredicted RBP21.49■■□□□ 1.03
ATG4D-212ENST00000590096 ECHDC3Q96DC8 303 aa21.49■■□□□ 1.03
ATG4D-212ENST00000590096 AGAP3Q96P47 875 aa21.49■■□□□ 1.03
ATG4D-212ENST00000590096 CARD9Q9H257 536 aa21.49■■□□□ 1.03
ATG4D-212ENST00000590096 SMOC1Q9H4F8 434 aa21.49■■□□□ 1.03
ATG4D-212ENST00000590096 PARD6AQ9NPB6 346 aa21.49■■□□□ 1.03
ATG4D-212ENST00000590096 PCDHGC4Q9Y5F7 938 aa21.49■■□□□ 1.03
ATG4D-212ENST00000590096 A0A1B0GTW7 788 aa21.48■■□□□ 1.03
ATG4D-212ENST00000590096 A0A1W2PQU0 124 aa21.48■■□□□ 1.03
ATG4D-212ENST00000590096 PRR5-ARHGAP8B1AHC4 643 aa21.48■■□□□ 1.03
ATG4D-212ENST00000590096 TRAFD1O14545 582 aaPredicted RBP21.48■■□□□ 1.03
ATG4D-212ENST00000590096 BCAT2O15382 392 aaPredicted RBP21.48■■□□□ 1.03
ATG4D-212ENST00000590096 KIF5CO60282 957 aa21.48■■□□□ 1.03
ATG4D-212ENST00000590096 CFIP05156 583 aa21.48■■□□□ 1.03
ATG4D-212ENST00000590096 SERPINF2P08697 491 aa21.48■■□□□ 1.03
ATG4D-212ENST00000590096 CA4P22748 312 aa21.48■■□□□ 1.03
ATG4D-212ENST00000590096 PTPN3P26045 913 aa21.48■■□□□ 1.03
ATG4D-212ENST00000590096 TEX44Q53QW1 395 aa21.48■■□□□ 1.03
ATG4D-212ENST00000590096 TRIM61Q5EBN2 209 aa21.48■■□□□ 1.03
ATG4D-212ENST00000590096 ZSCAN30Q86W11 494 aa21.48■■□□□ 1.03
ATG4D-212ENST00000590096 CDKL3Q8IVW4 592 aaPredicted RBP21.48■■□□□ 1.03
ATG4D-212ENST00000590096 HTR3CQ8WXA8 447 aa21.48■■□□□ 1.03
ATG4D-212ENST00000590096 NSMCE3Q96MG7 304 aa21.48■■□□□ 1.03
ATG4D-212ENST00000590096 NUSAP1Q9BXS6 441 aaKnown RBP21.48■■□□□ 1.03
ATG4D-212ENST00000590096 ITM2BQ9Y287 266 aa21.48■■□□□ 1.03
ATG4D-212ENST00000590096 PATE3B3GLJ2 98 aa21.47■■□□□ 1.03
ATG4D-212ENST00000590096 C10orf142B7Z368 130 aa21.47■■□□□ 1.03
ATG4D-212ENST00000590096 AREL1O15033 823 aa21.47■■□□□ 1.03
ATG4D-212ENST00000590096 HTRA2O43464 458 aaPredicted RBP21.47■■□□□ 1.03
ATG4D-212ENST00000590096 LATO43561 262 aa21.47■■□□□ 1.03
ATG4D-212ENST00000590096 CPP00450 1065 aa21.47■■□□□ 1.03
ATG4D-212ENST00000590096 RBP3P10745 1247 aa21.47■■□□□ 1.03
ATG4D-212ENST00000590096 NFKBIAP25963 317 aa21.47■■□□□ 1.03
ATG4D-212ENST00000590096 RPS21P63220 83 aaKnown RBP21.47■■□□□ 1.03
ATG4D-212ENST00000590096 TRAF2Q12933 501 aa21.47■■□□□ 1.03
ATG4D-212ENST00000590096 KLF1Q13351 362 aaPredicted RBP21.47■■□□□ 1.03
ATG4D-212ENST00000590096 ZNF569Q5MCW4 686 aa21.47■■□□□ 1.03
ATG4D-212ENST00000590096 ARMC12Q5T9G4 340 aa21.47■■□□□ 1.03
ATG4D-212ENST00000590096 DARS2Q6PI48 645 aaKnown RBP21.47■■□□□ 1.03
ATG4D-212ENST00000590096 PRR23CQ6ZRP0 262 aa21.47■■□□□ 1.03
ATG4D-212ENST00000590096 CNTD1Q8N815 330 aa21.47■■□□□ 1.03
ATG4D-212ENST00000590096 ARRDC2Q8TBH0 407 aa21.47■■□□□ 1.03
ATG4D-212ENST00000590096 CXorf40AQ8TE69 158 aa21.47■■□□□ 1.03
ATG4D-212ENST00000590096 VAT1Q99536 393 aa21.47■■□□□ 1.03
ATG4D-212ENST00000590096 FAM118BQ9BPY3 351 aa21.47■■□□□ 1.03
ATG4D-212ENST00000590096 TLR10Q9BXR5 811 aa21.47■■□□□ 1.03
ATG4D-212ENST00000590096 PCDH12Q9NPG4 1184 aa21.47■■□□□ 1.03
ATG4D-212ENST00000590096 GGT7Q9UJ14 662 aa21.47■■□□□ 1.03
ATG4D-212ENST00000590096 PYCARDQ9ULZ3 195 aa21.47■■□□□ 1.03
ATG4D-212ENST00000590096 DMTF1Q9Y222 760 aa21.47■■□□□ 1.03
ATG4D-212ENST00000590096 JRKLQ9Y4A0 524 aa21.47■■□□□ 1.03
ATG4D-212ENST00000590096 RAI2Q9Y5P3 530 aa21.47■■□□□ 1.03
ATG4D-212ENST00000590096 PI4KAP42356 2102 aa21.46■■□□□ 1.03
ATG4D-212ENST00000590096 ZNF189O75820 626 aaPredicted RBP21.46■■□□□ 1.03
ATG4D-212ENST00000590096 CD86P42081 329 aa21.46■■□□□ 1.03
ATG4D-212ENST00000590096 NIPAL4Q0D2K0 466 aa21.46■■□□□ 1.03
ATG4D-212ENST00000590096 SF3A2Q15428 464 aaKnown RBP21.46■■□□□ 1.03
ATG4D-212ENST00000590096 TCEAL6Q6IPX3 200 aa21.46■■□□□ 1.03
ATG4D-212ENST00000590096 SLC23A3Q6PIS1 610 aa21.46■■□□□ 1.03
ATG4D-212ENST00000590096 ZSWIM9Q86XI8 627 aa21.46■■□□□ 1.03
ATG4D-212ENST00000590096 SLC13A5Q86YT5 568 aaPredicted RBP21.46■■□□□ 1.03
ATG4D-212ENST00000590096 KIAA2013Q8IYS2 634 aa21.46■■□□□ 1.03
ATG4D-212ENST00000590096 TCEAL3Q969E4 200 aa21.46■■□□□ 1.03
ATG4D-212ENST00000590096 SERAC1Q96JX3 654 aa21.46■■□□□ 1.03
ATG4D-212ENST00000590096 TEKT5Q96M29 485 aa21.46■■□□□ 1.03
ATG4D-212ENST00000590096 KLHL8Q9P2G9 620 aaPredicted RBP21.46■■□□□ 1.03
ATG4D-212ENST00000590096 PHTF1Q9UMS5 762 aa21.46■■□□□ 1.03
ATG4D-212ENST00000590096 SLC6A14Q9UN76 642 aa21.46■■□□□ 1.03
ATG4D-212ENST00000590096 ZFR2Q9UPR6 939 aaKnown RBP21.46■■□□□ 1.03
ATG4D-212ENST00000590096 PCDHB9Q9Y5E1 797 aa21.46■■□□□ 1.03
ATG4D-212ENST00000590096 TRPM6Q9BX84 2022 aa21.46■■□□□ 1.03
ATG4D-212ENST00000590096 RIOK3O14730 519 aaKnown RBP21.45■■□□□ 1.02
ATG4D-212ENST00000590096 SPINT1O43278 529 aa21.45■■□□□ 1.02
ATG4D-212ENST00000590096 PGLSO95336 258 aa21.45■■□□□ 1.02
ATG4D-212ENST00000590096 TGM1P22735 817 aa21.45■■□□□ 1.02
ATG4D-212ENST00000590096 RBL1P28749 1068 aa21.45■■□□□ 1.02
ATG4D-212ENST00000590096 AFF3P51826 1226 aaKnown RBP21.45■■□□□ 1.02
ATG4D-212ENST00000590096 RACK1P63244 317 aaKnown RBP21.45■■□□□ 1.02
ATG4D-212ENST00000590096 FAM193AP78312 1265 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms