RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 PRAMEP78395 509 aa19.31■□□□□ 0.68
PRKCSH-209ENST00000589838 DLG1Q12959 904 aa19.31■□□□□ 0.68
PRKCSH-209ENST00000589838 MSLNQ13421 630 aaPredicted RBP19.31■□□□□ 0.68
PRKCSH-209ENST00000589838 ZNF460Q14592 562 aa19.31■□□□□ 0.68
PRKCSH-209ENST00000589838 SIRPB2Q5JXA9 342 aa19.31■□□□□ 0.68
PRKCSH-209ENST00000589838 BBS5Q8N3I7 341 aa19.31■□□□□ 0.68
PRKCSH-209ENST00000589838 AFAP1L2Q8N4X5 818 aa19.31■□□□□ 0.68
PRKCSH-209ENST00000589838 ARRDC2Q8TBH0 407 aa19.31■□□□□ 0.68
PRKCSH-209ENST00000589838 AGR3Q8TD06 166 aa19.31■□□□□ 0.68
PRKCSH-209ENST00000589838 DTX3LQ8TDB6 740 aa19.31■□□□□ 0.68
PRKCSH-209ENST00000589838 SEPT8Q92599 483 aa19.31■□□□□ 0.68
PRKCSH-209ENST00000589838 IFT43Q96FT9 208 aa19.31■□□□□ 0.68
PRKCSH-209ENST00000589838 ZNF333Q96JL9 665 aa19.31■□□□□ 0.68
PRKCSH-209ENST00000589838 MRPL9Q9BYD2 267 aaKnown RBP19.31■□□□□ 0.68
PRKCSH-209ENST00000589838 HMX1Q9NP08 348 aaPredicted RBP19.31■□□□□ 0.68
PRKCSH-209ENST00000589838 MAN1C1Q9NR34 630 aa19.31■□□□□ 0.68
PRKCSH-209ENST00000589838 UXTQ9UBK9 157 aaPredicted RBP19.31■□□□□ 0.68
PRKCSH-209ENST00000589838 GOLGA8QA0A0J9YX86 632 aa19.3■□□□□ 0.68
PRKCSH-209ENST00000589838 GOLGA8OA6NCC3 632 aa19.3■□□□□ 0.68
PRKCSH-209ENST00000589838 F5H5T6 163 aa19.3■□□□□ 0.68
PRKCSH-209ENST00000589838 GOLGA8NF8WBI6 632 aa19.3■□□□□ 0.68
PRKCSH-209ENST00000589838 MAP3K7O43318 606 aa19.3■□□□□ 0.68
PRKCSH-209ENST00000589838 GRID2O43424 1007 aa19.3■□□□□ 0.68
PRKCSH-209ENST00000589838 TBC1D4O60343 1298 aa19.3■□□□□ 0.68
PRKCSH-209ENST00000589838 PRAMEF11O60813 436 aa19.3■□□□□ 0.68
PRKCSH-209ENST00000589838 SOAT2O75908 522 aa19.3■□□□□ 0.68
PRKCSH-209ENST00000589838 EPOP01588 193 aa19.3■□□□□ 0.68
PRKCSH-209ENST00000589838 HOXB8P17481 243 aaPredicted RBP19.3■□□□□ 0.68
PRKCSH-209ENST00000589838 HLA-DPA1P20036 260 aa19.3■□□□□ 0.68
PRKCSH-209ENST00000589838 TACR2P21452 398 aa19.3■□□□□ 0.68
PRKCSH-209ENST00000589838 SLC26A3P40879 764 aa19.3■□□□□ 0.68
PRKCSH-209ENST00000589838 SLC11A1P49279 550 aa19.3■□□□□ 0.68
PRKCSH-209ENST00000589838 CUL3Q13618 768 aa19.3■□□□□ 0.68
PRKCSH-209ENST00000589838 ZNF235Q14590 738 aa19.3■□□□□ 0.68
PRKCSH-209ENST00000589838 SLC14A2Q15849 920 aa19.3■□□□□ 0.68
PRKCSH-209ENST00000589838 RNF19BQ6ZMZ0 732 aa19.3■□□□□ 0.68
PRKCSH-209ENST00000589838 KIRREL3Q8IZU9 778 aa19.3■□□□□ 0.68
PRKCSH-209ENST00000589838 PHTF2Q8N3S3 785 aa19.3■□□□□ 0.68
PRKCSH-209ENST00000589838 CPSF7Q8N684 471 aaKnown RBP19.3■□□□□ 0.68
PRKCSH-209ENST00000589838 CCNYL1Q8N7R7 359 aa19.3■□□□□ 0.68
PRKCSH-209ENST00000589838 FEM1CQ96JP0 617 aa19.3■□□□□ 0.68
PRKCSH-209ENST00000589838 FAR2Q96K12 515 aa19.3■□□□□ 0.68
PRKCSH-209ENST00000589838 OR52B2Q96RD2 323 aa19.3■□□□□ 0.68
PRKCSH-209ENST00000589838 MRGBPQ9NV56 204 aa19.3■□□□□ 0.68
PRKCSH-209ENST00000589838 NMRK1Q9NWW6 199 aa19.3■□□□□ 0.68
PRKCSH-209ENST00000589838 MARCH5Q9NX47 278 aa19.3■□□□□ 0.68
PRKCSH-209ENST00000589838 ZDHHC2Q9UIJ5 367 aa19.3■□□□□ 0.68
PRKCSH-209ENST00000589838 RGSL1A5PLK6 1076 aa19.29■□□□□ 0.68
PRKCSH-209ENST00000589838 ZBTB14O43829 449 aa19.29■□□□□ 0.68
PRKCSH-209ENST00000589838 TLR5O60602 858 aa19.29■□□□□ 0.68
PRKCSH-209ENST00000589838 GNRH1P01148 92 aa19.29■□□□□ 0.68
PRKCSH-209ENST00000589838 FGF1P05230 155 aa19.29■□□□□ 0.68
PRKCSH-209ENST00000589838 BTKQ06187 659 aa19.29■□□□□ 0.68
PRKCSH-209ENST00000589838 LHX8Q68G74 356 aa19.29■□□□□ 0.68
PRKCSH-209ENST00000589838 PGM2L1Q6PCE3 622 aa19.29■□□□□ 0.68
PRKCSH-209ENST00000589838 CILP2Q8IUL8 1156 aa19.29■□□□□ 0.68
PRKCSH-209ENST00000589838 LSMEM2Q8N112 164 aa19.29■□□□□ 0.68
PRKCSH-209ENST00000589838 DBF4BQ8NFT6 615 aa19.29■□□□□ 0.68
PRKCSH-209ENST00000589838 OR13J1Q8NGT2 312 aa19.29■□□□□ 0.68
PRKCSH-209ENST00000589838 OR6P1Q8NGX9 317 aa19.29■□□□□ 0.68
PRKCSH-209ENST00000589838 CD99L2Q8TCZ2 262 aa19.29■□□□□ 0.68
PRKCSH-209ENST00000589838 JADE3Q92613 823 aa19.29■□□□□ 0.68
PRKCSH-209ENST00000589838 CXorf56Q9H5V9 222 aa19.29■□□□□ 0.68
PRKCSH-209ENST00000589838 EML4Q9HC35 981 aaKnown RBP19.29■□□□□ 0.68
PRKCSH-209ENST00000589838 IGSF5Q9NSI5 407 aa19.29■□□□□ 0.68
PRKCSH-209ENST00000589838 SSX2IPQ9Y2D8 614 aa19.29■□□□□ 0.68
PRKCSH-209ENST00000589838 LOC100653049A0A140TA62 436 aa19.28■□□□□ 0.68
PRKCSH-209ENST00000589838 KRT34O76011 436 aa19.28■□□□□ 0.68
PRKCSH-209ENST00000589838 ANPEPP15144 967 aa19.28■□□□□ 0.68
PRKCSH-209ENST00000589838 ETFBP38117 255 aa19.28■□□□□ 0.68
PRKCSH-209ENST00000589838 PFKPQ01813 784 aa19.28■□□□□ 0.68
PRKCSH-209ENST00000589838 CSHL1Q14406 222 aa19.28■□□□□ 0.68
PRKCSH-209ENST00000589838 ACAP2Q15057 778 aa19.28■□□□□ 0.68
PRKCSH-209ENST00000589838 LSM12Q3MHD2 195 aaKnown RBP19.28■□□□□ 0.68
PRKCSH-209ENST00000589838 C5orf22Q49AR2 442 aa19.28■□□□□ 0.68
PRKCSH-209ENST00000589838 TECRLQ5HYJ1 363 aa19.28■□□□□ 0.68
PRKCSH-209ENST00000589838 RBM20Q5T481 1227 aaKnown RBP19.28■□□□□ 0.68
PRKCSH-209ENST00000589838 HECTD2Q5U5R9 776 aa19.28■□□□□ 0.68
PRKCSH-209ENST00000589838 SLC22A9Q8IVM8 553 aa19.28■□□□□ 0.68
PRKCSH-209ENST00000589838 PGBD5Q8N414 524 aa19.28■□□□□ 0.68
PRKCSH-209ENST00000589838 RP9Q8TA86 221 aaKnown RBP19.28■□□□□ 0.68
PRKCSH-209ENST00000589838 B3GALT6Q96L58 329 aa19.28■□□□□ 0.68
PRKCSH-209ENST00000589838 SEMA3CQ99985 751 aa19.28■□□□□ 0.68
PRKCSH-209ENST00000589838 POMKQ9H5K3 350 aa19.28■□□□□ 0.68
PRKCSH-209ENST00000589838 CORO1CQ9ULV4 474 aaPredicted RBP19.28■□□□□ 0.68
PRKCSH-209ENST00000589838 PHF24Q9UPV7 400 aa19.28■□□□□ 0.68
PRKCSH-209ENST00000589838 VWA7Q9Y334 891 aa19.28■□□□□ 0.68
PRKCSH-209ENST00000589838 SLC38A8A6NNN8 435 aa19.28■□□□□ 0.68
PRKCSH-209ENST00000589838 NBNO60934 754 aa19.28■□□□□ 0.68
PRKCSH-209ENST00000589838 ATXN1LP0C7T5 689 aaKnown RBP19.28■□□□□ 0.68
PRKCSH-209ENST00000589838 ITGAXP20702 1163 aa19.28■□□□□ 0.68
PRKCSH-209ENST00000589838 PIK3R1P27986 724 aa19.28■□□□□ 0.68
PRKCSH-209ENST00000589838 PGGT1BP53609 377 aa19.28■□□□□ 0.68
PRKCSH-209ENST00000589838 DUSP4Q13115 394 aa19.28■□□□□ 0.68
PRKCSH-209ENST00000589838 C16orf89Q6UX73 402 aa19.28■□□□□ 0.68
PRKCSH-209ENST00000589838 TRIM67Q6ZTA4 783 aa19.28■□□□□ 0.68
PRKCSH-209ENST00000589838 FRMD7Q6ZUT3 714 aa19.28■□□□□ 0.68
PRKCSH-209ENST00000589838 PTAR1Q7Z6K3 402 aaPredicted RBP19.28■□□□□ 0.68
PRKCSH-209ENST00000589838 ADGRG6Q86SQ4 1221 aa19.28■□□□□ 0.68
PRKCSH-209ENST00000589838 NPAS4Q8IUM7 802 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms