RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 NDUFAF2Q8N183 169 aa13.74□□□□□ -0.21
VMP1-210ENST00000589823 IPMKQ8NFU5 416 aa13.74□□□□□ -0.21
VMP1-210ENST00000589823 TADA1Q96BN2 335 aa13.74□□□□□ -0.21
VMP1-210ENST00000589823 OXNAD1Q96HP4 312 aaPredicted RBP13.74□□□□□ -0.21
VMP1-210ENST00000589823 NSMCE3Q96MG7 304 aa13.74□□□□□ -0.21
VMP1-210ENST00000589823 CARD6Q9BX69 1037 aa13.74□□□□□ -0.21
VMP1-210ENST00000589823 FSD1LQ9BXM9 530 aa13.74□□□□□ -0.21
VMP1-210ENST00000589823 TDRD1Q9BXT4 1180 aaKnown RBP13.74□□□□□ -0.21
VMP1-210ENST00000589823 ADGRE3Q9BY15 652 aa13.74□□□□□ -0.21
VMP1-210ENST00000589823 HDAC8Q9BY41 377 aa13.74□□□□□ -0.21
VMP1-210ENST00000589823 ETNK1Q9HBU6 452 aa13.74□□□□□ -0.21
VMP1-210ENST00000589823 ITM2CQ9NQX7 267 aa13.74□□□□□ -0.21
VMP1-210ENST00000589823 ASIC3Q9UHC3 531 aa13.74□□□□□ -0.21
VMP1-210ENST00000589823 CHKBQ9Y259 395 aa13.74□□□□□ -0.21
VMP1-210ENST00000589823 ARIH1Q9Y4X5 557 aaPredicted RBP13.74□□□□□ -0.21
VMP1-210ENST00000589823 PCDHB9Q9Y5E1 797 aa13.74□□□□□ -0.21
VMP1-210ENST00000589823 TSPAN11A1L157 253 aa13.73□□□□□ -0.21
VMP1-210ENST00000589823 FAM187AA6NFU0 413 aa13.73□□□□□ -0.21
VMP1-210ENST00000589823 TTI1O43156 1089 aa13.73□□□□□ -0.21
VMP1-210ENST00000589823 PGLSO95336 258 aa13.73□□□□□ -0.21
VMP1-210ENST00000589823 DRD3P35462 400 aa13.73□□□□□ -0.21
VMP1-210ENST00000589823 P2RY2P41231 377 aa13.73□□□□□ -0.21
VMP1-210ENST00000589823 WNT3AP56704 352 aa13.73□□□□□ -0.21
VMP1-210ENST00000589823 CDK18Q07002 472 aa13.73□□□□□ -0.21
VMP1-210ENST00000589823 CNTN1Q12860 1018 aa13.73□□□□□ -0.21
VMP1-210ENST00000589823 SEMA5AQ13591 1074 aa13.73□□□□□ -0.21
VMP1-210ENST00000589823 PTK6Q13882 451 aa13.73□□□□□ -0.21
VMP1-210ENST00000589823 KDELC1Q6UW63 502 aa13.73□□□□□ -0.21
VMP1-210ENST00000589823 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.73□□□□□ -0.21
VMP1-210ENST00000589823 KDELC2Q7Z4H8 507 aa13.73□□□□□ -0.21
VMP1-210ENST00000589823 TTC7BQ86TV6 843 aa13.73□□□□□ -0.21
VMP1-210ENST00000589823 MAML2Q8IZL2 1156 aaPredicted RBP13.73□□□□□ -0.21
VMP1-210ENST00000589823 AADATQ8N5Z0 425 aa13.73□□□□□ -0.21
VMP1-210ENST00000589823 LPCAT1Q8NF37 534 aa13.73□□□□□ -0.21
VMP1-210ENST00000589823 VOPP1Q96AW1 172 aa13.73□□□□□ -0.21
VMP1-210ENST00000589823 ECHDC3Q96DC8 303 aa13.73□□□□□ -0.21
VMP1-210ENST00000589823 FEM1CQ96JP0 617 aa13.73□□□□□ -0.21
VMP1-210ENST00000589823 SPACA7Q96KW9 195 aa13.73□□□□□ -0.21
VMP1-210ENST00000589823 MLPHQ9BV36 600 aaPredicted RBP13.73□□□□□ -0.21
VMP1-210ENST00000589823 LRRC40Q9H9A6 602 aa13.73□□□□□ -0.21
VMP1-210ENST00000589823 USP36Q9P275 1121 aaKnown RBP13.73□□□□□ -0.21
VMP1-210ENST00000589823 FZD4Q9ULV1 537 aa13.73□□□□□ -0.21
VMP1-210ENST00000589823 PHTF1Q9UMS5 762 aa13.73□□□□□ -0.21
VMP1-210ENST00000589823 NEU2Q9Y3R4 380 aa13.73□□□□□ -0.21
VMP1-210ENST00000589823 ZDBF2Q9HCK1 2354 aa13.72□□□□□ -0.21
VMP1-210ENST00000589823 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.72□□□□□ -0.21
VMP1-210ENST00000589823 ERI2A8K979 691 aaKnown RBP13.72□□□□□ -0.21
VMP1-210ENST00000589823 UPK3BL1B0FP48 263 aa13.72□□□□□ -0.21
VMP1-210ENST00000589823 UPK3BL2E5RIL1 263 aa13.72□□□□□ -0.21
VMP1-210ENST00000589823 PLK4O00444 970 aa13.72□□□□□ -0.21
VMP1-210ENST00000589823 SLC7A4O43246 635 aa13.72□□□□□ -0.21
VMP1-210ENST00000589823 GALR2O43603 387 aaPredicted RBP13.72□□□□□ -0.21
VMP1-210ENST00000589823 FZD6O60353 706 aa13.72□□□□□ -0.21
VMP1-210ENST00000589823 NDST3O95803 873 aa13.72□□□□□ -0.21
VMP1-210ENST00000589823 ADRB3P13945 408 aa13.72□□□□□ -0.21
VMP1-210ENST00000589823 TIMP2P16035 220 aa13.72□□□□□ -0.21
VMP1-210ENST00000589823 OXTRP30559 389 aa13.72□□□□□ -0.21
VMP1-210ENST00000589823 ADCY8P40145 1251 aa13.72□□□□□ -0.21
VMP1-210ENST00000589823 FNTBP49356 437 aa13.72□□□□□ -0.21
VMP1-210ENST00000589823 TPMTP51580 245 aa13.72□□□□□ -0.21
VMP1-210ENST00000589823 SUOXP51687 545 aa13.72□□□□□ -0.21
VMP1-210ENST00000589823 RPL26P61254 145 aaKnown RBP13.72□□□□□ -0.21
VMP1-210ENST00000589823 DMWDQ09019 674 aa13.72□□□□□ -0.21
VMP1-210ENST00000589823 IHHQ14623 411 aa13.72□□□□□ -0.21
VMP1-210ENST00000589823 ANGPT1Q15389 498 aa13.72□□□□□ -0.21
VMP1-210ENST00000589823 UGP2Q16851 508 aa13.72□□□□□ -0.21
VMP1-210ENST00000589823 USP39Q53GS9 565 aaKnown RBP13.72□□□□□ -0.21
VMP1-210ENST00000589823 C8orf74Q6P047 294 aa13.72□□□□□ -0.21
VMP1-210ENST00000589823 ERAP2Q6P179 960 aa13.72□□□□□ -0.21
VMP1-210ENST00000589823 FAM124AQ86V42 546 aa13.72□□□□□ -0.21
VMP1-210ENST00000589823 WDR5BQ86VZ2 330 aa13.72□□□□□ -0.21
VMP1-210ENST00000589823 LONP2Q86WA8 852 aa13.72□□□□□ -0.21
VMP1-210ENST00000589823 MMGT1Q8N4V1 131 aa13.72□□□□□ -0.21
VMP1-210ENST00000589823 RAB7BQ96AH8 199 aa13.72□□□□□ -0.21
VMP1-210ENST00000589823 RMDN1Q96DB5 314 aa13.72□□□□□ -0.21
VMP1-210ENST00000589823 MRGPRX2Q96LB1 330 aa13.72□□□□□ -0.21
VMP1-210ENST00000589823 GORASP1Q9BQQ3 440 aa13.72□□□□□ -0.21
VMP1-210ENST00000589823 LRFN3Q9BTN0 628 aa13.72□□□□□ -0.21
VMP1-210ENST00000589823 FICDQ9BVA6 458 aa13.72□□□□□ -0.21
VMP1-210ENST00000589823 FAM126AQ9BYI3 521 aaPredicted RBP13.72□□□□□ -0.21
VMP1-210ENST00000589823 BTBD1Q9H0C5 482 aa13.72□□□□□ -0.21
VMP1-210ENST00000589823 NEUROG2Q9H2A3 272 aa13.72□□□□□ -0.21
VMP1-210ENST00000589823 L2HGDHQ9H9P8 463 aa13.72□□□□□ -0.21
VMP1-210ENST00000589823 SERGEFQ9UGK8 458 aa13.72□□□□□ -0.21
VMP1-210ENST00000589823 CYP8B1Q9UNU6 501 aa13.72□□□□□ -0.21
VMP1-210ENST00000589823 RPL26L1Q9UNX3 145 aaKnown RBP13.72□□□□□ -0.21
VMP1-210ENST00000589823 NEMP1O14524 444 aa13.71□□□□□ -0.21
VMP1-210ENST00000589823 RAD51CO43502 376 aa13.71□□□□□ -0.21
VMP1-210ENST00000589823 AP2A1O95782 977 aa13.71□□□□□ -0.21
VMP1-210ENST00000589823 EPOP01588 193 aa13.71□□□□□ -0.21
VMP1-210ENST00000589823 IGLV3-19P01714 112 aa13.71□□□□□ -0.21
VMP1-210ENST00000589823 APRTP07741 180 aa13.71□□□□□ -0.21
VMP1-210ENST00000589823 PDHA1P08559 390 aa13.71□□□□□ -0.21
VMP1-210ENST00000589823 TDGF1P13385 188 aa13.71□□□□□ -0.21
VMP1-210ENST00000589823 HLA-DPA1P20036 260 aa13.71□□□□□ -0.21
VMP1-210ENST00000589823 GRIA4P48058 902 aa13.71□□□□□ -0.21
VMP1-210ENST00000589823 TERF1P54274 439 aa13.71□□□□□ -0.21
VMP1-210ENST00000589823 ELP6Q0PNE2 266 aa13.71□□□□□ -0.21
VMP1-210ENST00000589823 GALNT3Q14435 633 aa13.71□□□□□ -0.21
VMP1-210ENST00000589823 KCTD19Q17RG1 926 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms