RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 VOPP1Q96AW1 172 aa6.18□□□□□ -1.42
VPS25-204ENST00000589577 SLC39A13Q96H72 371 aa6.18□□□□□ -1.42
VPS25-204ENST00000589577 CEP63Q96MT8 703 aa6.18□□□□□ -1.42
VPS25-204ENST00000589577 HAPLN3Q96S86 360 aa6.18□□□□□ -1.42
VPS25-204ENST00000589577 MFRPQ9BY79 579 aa6.18□□□□□ -1.42
VPS25-204ENST00000589577 EDEM3Q9BZQ6 932 aa6.18□□□□□ -1.42
VPS25-204ENST00000589577 METTL14Q9HCE5 456 aaKnown RBP6.18□□□□□ -1.42
VPS25-204ENST00000589577 MLXIPLQ9NP71 852 aa6.18□□□□□ -1.42
VPS25-204ENST00000589577 MBNL1Q9NR56 388 aaKnown RBP6.18□□□□□ -1.42
VPS25-204ENST00000589577 ABCC13Q9NSE7 274 aa6.18□□□□□ -1.42
VPS25-204ENST00000589577 SLC39A1Q9NY26 324 aa6.18□□□□□ -1.42
VPS25-204ENST00000589577 RRN3Q9NYV6 651 aa6.18□□□□□ -1.42
VPS25-204ENST00000589577 TMEM9Q9P0T7 183 aa6.18□□□□□ -1.42
VPS25-204ENST00000589577 RCOR3Q9P2K3 495 aaPredicted RBP6.18□□□□□ -1.42
VPS25-204ENST00000589577 LRIT1Q9P2V4 623 aa6.18□□□□□ -1.42
VPS25-204ENST00000589577 DOLKQ9UPQ8 538 aa6.18□□□□□ -1.42
VPS25-204ENST00000589577 HS3ST2Q9Y278 367 aa6.18□□□□□ -1.42
VPS25-204ENST00000589577 WASF2Q9Y6W5 498 aa6.18□□□□□ -1.42
VPS25-204ENST00000589577 GOLGA6L6A8MZA4 724 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 B4E171 279 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 M0QYT0 321 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 IKBKBO14920 756 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 XPO1O14980 1071 aaKnown RBP6.17□□□□□ -1.42
VPS25-204ENST00000589577 SLC16A3O15427 465 aaKnown RBP6.17□□□□□ -1.42
VPS25-204ENST00000589577 AP1G1O43747 822 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 NUDT21O43809 227 aaKnown RBP6.17□□□□□ -1.42
VPS25-204ENST00000589577 ZNF821O75541 412 aaPredicted RBP6.17□□□□□ -1.42
VPS25-204ENST00000589577 LEFTY1O75610 366 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 MAP3K6O95382 1288 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 DLGAP3O95886 979 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 MOCS2O96007 188 aaPredicted RBP6.17□□□□□ -1.42
VPS25-204ENST00000589577 HLA-DRAP01903 254 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 NR3C1P04150 777 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 ALPIP09923 528 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 THRAP10827 490 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 TACR2P21452 398 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 CD1CP29017 333 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 PSMC2P35998 433 aaKnown RBP6.17□□□□□ -1.42
VPS25-204ENST00000589577 TSPAN7P41732 249 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 MTIF2P46199 727 aaKnown RBP6.17□□□□□ -1.42
VPS25-204ENST00000589577 COPB1P53618 953 aaKnown RBP6.17□□□□□ -1.42
VPS25-204ENST00000589577 LIMK2P53671 638 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 RAD23BP54727 409 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 OR1D5P58170 312 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 YPEL5P62699 121 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 MC1RQ01726 317 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 CENPCQ03188 943 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 ERV3-1Q14264 604 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 NR1D2Q14995 579 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 AMZ1Q400G9 498 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 C14orf28Q4W4Y0 310 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 ARSIQ5FYB1 569 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 DCAF12Q5T6F0 453 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 TCERG1LQ5VWI1 586 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 PAPD7Q5XG87 772 aaKnown RBP6.17□□□□□ -1.42
VPS25-204ENST00000589577 ARHGAP17Q68EM7 881 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 JMJD6Q6NYC1 403 aaPredicted RBP6.17□□□□□ -1.42
VPS25-204ENST00000589577 INTS8Q75QN2 995 aaKnown RBP6.17□□□□□ -1.42
VPS25-204ENST00000589577 PARS2Q7L3T8 475 aaKnown RBP6.17□□□□□ -1.42
VPS25-204ENST00000589577 ZNF438Q7Z4V0 828 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 VPS36Q86VN1 386 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 HID1Q8IV36 788 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 APLFQ8IW19 511 aaPredicted RBP6.17□□□□□ -1.42
VPS25-204ENST00000589577 SCML4Q8N228 414 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 AOPEPQ8N6M6 819 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 ANKRD52Q8NB46 1076 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 SLC4A11Q8NBS3 891 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 CCDC150Q8NCX0 1101 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 AGBL5Q8NDL9 886 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 ENOX1Q8TC92 643 aaKnown RBP6.17□□□□□ -1.42
VPS25-204ENST00000589577 CLEC4CQ8WTT0 213 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 SCG3Q8WXD2 468 aaKnown RBP6.17□□□□□ -1.42
VPS25-204ENST00000589577 ASB12Q8WXK4 309 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 KCTD13Q8WZ19 329 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 FUBP1Q96AE4 644 aaKnown RBP6.17□□□□□ -1.42
VPS25-204ENST00000589577 PDXPQ96GD0 296 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 FEM1CQ96JP0 617 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 RBM15Q96T37 977 aaKnown RBP eCLIP6.17□□□□□ -1.42
VPS25-204ENST00000589577 PSMB7Q99436 277 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 PRMT1Q99873 361 aaKnown RBP6.17□□□□□ -1.42
VPS25-204ENST00000589577 CTRCQ99895 268 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 BPIFA3Q9BQP9 254 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 FEM1AQ9BSK4 669 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 EFHD1Q9BUP0 239 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 SLC29A3Q9BZD2 475 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 ASPSCR1Q9BZE9 553 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 INTS2Q9H0H0 1204 aaKnown RBP6.17□□□□□ -1.42
VPS25-204ENST00000589577 THAP9Q9H5L6 903 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 CYP3A43Q9HB55 503 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 DYRK4Q9NR20 520 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 AKAP7Q9P0M2 348 aaPredicted RBP6.17□□□□□ -1.42
VPS25-204ENST00000589577 ARMCX3Q9UH62 379 aaPredicted RBP6.17□□□□□ -1.42
VPS25-204ENST00000589577 SLC25A13Q9UJS0 675 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 TRAF3IP3Q9Y228 551 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 TMEM184BQ9Y519 407 aaPredicted RBP6.17□□□□□ -1.42
VPS25-204ENST00000589577 STAB1Q9NY15 2570 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 DOCK4Q8N1I0 1966 aa6.17□□□□□ -1.42
VPS25-204ENST00000589577 ZGRF1Q86YA3 2104 aa6.16□□□□□ -1.42
VPS25-204ENST00000589577 HEATR9A2RTY3 570 aa6.16□□□□□ -1.42
VPS25-204ENST00000589577 GOLGA6L3A6NEY3 463 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms