RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 MYLK2Q9H1R3 596 aa10.47□□□□□ -0.73
VPS25-203ENST00000589520 KCNK13Q9HB14 408 aa10.47□□□□□ -0.73
VPS25-203ENST00000589520 IL21Q9HBE4 155 aa10.47□□□□□ -0.73
VPS25-203ENST00000589520 SCUBE2Q9NQ36 999 aa10.47□□□□□ -0.73
VPS25-203ENST00000589520 ARHGEF3Q9NR81 526 aa10.47□□□□□ -0.73
VPS25-203ENST00000589520 GKN1Q9NS71 199 aa10.47□□□□□ -0.73
VPS25-203ENST00000589520 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.47□□□□□ -0.73
VPS25-203ENST00000589520 HACD3Q9P035 362 aa10.47□□□□□ -0.73
VPS25-203ENST00000589520 LNPEPQ9UIQ6 1025 aa10.47□□□□□ -0.73
VPS25-203ENST00000589520 RPL26L1Q9UNX3 145 aaKnown RBP10.47□□□□□ -0.73
VPS25-203ENST00000589520 GREB1Q4ZG55 1949 aa10.46□□□□□ -0.73
VPS25-203ENST00000589520 TRAV19A0A0A6YYK7 116 aa10.46□□□□□ -0.73
VPS25-203ENST00000589520 A0A0D9SEW6 157 aa10.46□□□□□ -0.73
VPS25-203ENST00000589520 C2orf78A6NCI8 922 aa10.46□□□□□ -0.73
VPS25-203ENST00000589520 C2orf81A6NN90 581 aa10.46□□□□□ -0.73
VPS25-203ENST00000589520 H0Y626 953 aa10.46□□□□□ -0.73
VPS25-203ENST00000589520 GFRA2O00451 464 aa10.46□□□□□ -0.73
VPS25-203ENST00000589520 TGM5O43548 720 aa10.46□□□□□ -0.73
VPS25-203ENST00000589520 LDB2O43679 373 aa10.46□□□□□ -0.73
VPS25-203ENST00000589520 RPP40O75818 363 aaKnown RBP10.46□□□□□ -0.73
VPS25-203ENST00000589520 HAUS5O94927 633 aa10.46□□□□□ -0.73
VPS25-203ENST00000589520 LUC7L3O95232 432 aaKnown RBP10.46□□□□□ -0.73
VPS25-203ENST00000589520 FGF3P11487 239 aaPredicted RBP10.46□□□□□ -0.73
VPS25-203ENST00000589520 ARNTP27540 789 aa10.46□□□□□ -0.73
VPS25-203ENST00000589520 GABRB3P28472 473 aa10.46□□□□□ -0.73
VPS25-203ENST00000589520 CSNK1DP48730 415 aa10.46□□□□□ -0.73
VPS25-203ENST00000589520 NCALDP61601 193 aa10.46□□□□□ -0.73
VPS25-203ENST00000589520 RPS24P62847 133 aaKnown RBP10.46□□□□□ -0.73
VPS25-203ENST00000589520 UBE3AQ05086 875 aa10.46□□□□□ -0.73
VPS25-203ENST00000589520 RIPK1Q13546 671 aa10.46□□□□□ -0.73
VPS25-203ENST00000589520 PCLAFQ15004 111 aa10.46□□□□□ -0.73
VPS25-203ENST00000589520 CYTH1Q15438 398 aa10.46□□□□□ -0.73
VPS25-203ENST00000589520 TAF1AQ15573 450 aaPredicted RBP10.46□□□□□ -0.73
VPS25-203ENST00000589520 FAM83EQ2M2I3 478 aa10.46□□□□□ -0.73
VPS25-203ENST00000589520 PPM1JQ5JR12 505 aa10.46□□□□□ -0.73
VPS25-203ENST00000589520 AGAP9Q5VTM2 703 aa10.46□□□□□ -0.73
VPS25-203ENST00000589520 RNF219Q5W0B1 726 aaPredicted RBP10.46□□□□□ -0.73
VPS25-203ENST00000589520 ZNF470Q6ECI4 717 aa10.46□□□□□ -0.73
VPS25-203ENST00000589520 FAM45BPQ6NSW5 357 aa10.46□□□□□ -0.73
VPS25-203ENST00000589520 C16orf46Q6P387 395 aa10.46□□□□□ -0.73
VPS25-203ENST00000589520 KLC3Q6P597 504 aa10.46□□□□□ -0.73
VPS25-203ENST00000589520 PSRC1Q6PGN9 363 aaPredicted RBP10.46□□□□□ -0.73
VPS25-203ENST00000589520 ZYG11AQ6WRX3 759 aa10.46□□□□□ -0.73
VPS25-203ENST00000589520 ASRGL1Q7L266 308 aa10.46□□□□□ -0.73
VPS25-203ENST00000589520 TMEM150AQ86TG1 271 aa10.46□□□□□ -0.73
VPS25-203ENST00000589520 TBC1D1Q86TI0 1168 aaPredicted RBP10.46□□□□□ -0.73
VPS25-203ENST00000589520 MTDHQ86UE4 582 aaKnown RBP10.46□□□□□ -0.73
VPS25-203ENST00000589520 CIR1Q86X95 450 aaPredicted RBP10.46□□□□□ -0.73
VPS25-203ENST00000589520 CILP2Q8IUL8 1156 aa10.46□□□□□ -0.73
VPS25-203ENST00000589520 C10orf107Q8IVU9 208 aa10.46□□□□□ -0.73
VPS25-203ENST00000589520 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.46□□□□□ -0.73
VPS25-203ENST00000589520 DCAF4L2Q8NA75 395 aa10.46□□□□□ -0.73
VPS25-203ENST00000589520 OR7D4Q8NG98 312 aa10.46□□□□□ -0.73
VPS25-203ENST00000589520 FAM45AQ8TCE6 357 aa10.46□□□□□ -0.73
VPS25-203ENST00000589520 PDCD6IPQ8WUM4 868 aaKnown RBP10.46□□□□□ -0.73
VPS25-203ENST00000589520 NSL1Q96IY1 281 aa10.46□□□□□ -0.73
VPS25-203ENST00000589520 ZFRQ96KR1 1074 aaKnown RBP10.46□□□□□ -0.73
VPS25-203ENST00000589520 PRICKLE1Q96MT3 831 aaPredicted RBP10.46□□□□□ -0.73
VPS25-203ENST00000589520 TRIB3Q96RU7 358 aa10.46□□□□□ -0.73
VPS25-203ENST00000589520 RAD9AQ99638 391 aa10.46□□□□□ -0.73
VPS25-203ENST00000589520 MRPL57Q9BQC6 102 aaKnown RBP10.46□□□□□ -0.73
VPS25-203ENST00000589520 ZBED2Q9BTP6 218 aa10.46□□□□□ -0.73
VPS25-203ENST00000589520 C2orf49Q9BVC5 232 aaPredicted RBP10.46□□□□□ -0.73
VPS25-203ENST00000589520 C1QTNF1Q9BXJ1 281 aa10.46□□□□□ -0.73
VPS25-203ENST00000589520 TMEM120AQ9BXJ8 343 aa10.46□□□□□ -0.73
VPS25-203ENST00000589520 LRMDAQ9H2I8 198 aa10.46□□□□□ -0.73
VPS25-203ENST00000589520 ATXN3LQ9H3M9 355 aa10.46□□□□□ -0.73
VPS25-203ENST00000589520 TASP1Q9H6P5 420 aa10.46□□□□□ -0.73
VPS25-203ENST00000589520 POPDC3Q9HBV1 291 aa10.46□□□□□ -0.73
VPS25-203ENST00000589520 SLC40A1Q9NP59 571 aa10.46□□□□□ -0.73
VPS25-203ENST00000589520 INTS10Q9NVR2 710 aaKnown RBP10.46□□□□□ -0.73
VPS25-203ENST00000589520 OXSMQ9NWU1 459 aa10.46□□□□□ -0.73
VPS25-203ENST00000589520 IL1RAPL1Q9NZN1 696 aa10.46□□□□□ -0.73
VPS25-203ENST00000589520 SLC17A6Q9P2U8 582 aa10.46□□□□□ -0.73
VPS25-203ENST00000589520 HEY2Q9UBP5 337 aa10.46□□□□□ -0.73
VPS25-203ENST00000589520 DPP7Q9UHL4 492 aa10.46□□□□□ -0.73
VPS25-203ENST00000589520 DCTN4Q9UJW0 460 aa10.46□□□□□ -0.73
VPS25-203ENST00000589520 RUVBL2Q9Y230 463 aaKnown RBP10.46□□□□□ -0.73
VPS25-203ENST00000589520 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.46□□□□□ -0.73
VPS25-203ENST00000589520 VWA7Q9Y334 891 aa10.46□□□□□ -0.73
VPS25-203ENST00000589520 SH3BP1Q9Y3L3 701 aa10.46□□□□□ -0.73
VPS25-203ENST00000589520 LTBP2Q14767 1821 aa10.46□□□□□ -0.74
VPS25-203ENST00000589520 SCN5AQ14524 2016 aa10.46□□□□□ -0.74
VPS25-203ENST00000589520 ZNF638Q14966 1978 aaKnown RBP10.45□□□□□ -0.74
VPS25-203ENST00000589520 DOCK4Q8N1I0 1966 aa10.45□□□□□ -0.74
VPS25-203ENST00000589520 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.45□□□□□ -0.74
VPS25-203ENST00000589520 G3V2L1 256 aa10.45□□□□□ -0.74
VPS25-203ENST00000589520 TBL1XO60907 577 aa10.45□□□□□ -0.74
VPS25-203ENST00000589520 PENKP01210 267 aaPredicted RBP10.45□□□□□ -0.74
VPS25-203ENST00000589520 PRKCGP05129 697 aa10.45□□□□□ -0.74
VPS25-203ENST00000589520 SERPINA6P08185 405 aa10.45□□□□□ -0.74
VPS25-203ENST00000589520 CNPP09543 421 aaKnown RBP10.45□□□□□ -0.74
VPS25-203ENST00000589520 NQO1P15559 274 aaKnown RBP10.45□□□□□ -0.74
VPS25-203ENST00000589520 ALOX15P16050 662 aaPredicted RBP10.45□□□□□ -0.74
VPS25-203ENST00000589520 KCNA4P22459 653 aa10.45□□□□□ -0.74
VPS25-203ENST00000589520 CALB2P22676 271 aa10.45□□□□□ -0.74
VPS25-203ENST00000589520 ITGB8P26012 769 aa10.45□□□□□ -0.74
VPS25-203ENST00000589520 GABRR2P28476 465 aa10.45□□□□□ -0.74
VPS25-203ENST00000589520 PTPN4P29074 926 aa10.45□□□□□ -0.74
VPS25-203ENST00000589520 SLC1A2P43004 574 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms