RNA–Protein interactions for RNA: ENST00000589216.1

PTPN2-208, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 3

Gene PTPN2, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-208ENST00000589216 NPNTQ6UXI9 565 aa9.96□□□□□ -0.82
PTPN2-208ENST00000589216 NYAP1Q6ZVC0 841 aa9.96□□□□□ -0.82
PTPN2-208ENST00000589216 KANSL1Q7Z3B3 1105 aa9.96□□□□□ -0.82
PTPN2-208ENST00000589216 PTAR1Q7Z6K3 402 aaPredicted RBP9.96□□□□□ -0.82
PTPN2-208ENST00000589216 ABI3BPQ7Z7G0 1075 aa9.96□□□□□ -0.82
PTPN2-208ENST00000589216 MFSD2AQ8NA29 543 aa9.96□□□□□ -0.82
PTPN2-208ENST00000589216 SPC24Q8NBT2 197 aa9.96□□□□□ -0.82
PTPN2-208ENST00000589216 SETD7Q8WTS6 366 aaKnown RBP9.96□□□□□ -0.82
PTPN2-208ENST00000589216 RAB7BQ96AH8 199 aa9.96□□□□□ -0.82
PTPN2-208ENST00000589216 ECHDC3Q96DC8 303 aa9.96□□□□□ -0.82
PTPN2-208ENST00000589216 ZNF599Q96NL3 588 aa9.96□□□□□ -0.82
PTPN2-208ENST00000589216 SMIM14Q96QK8 99 aa9.96□□□□□ -0.82
PTPN2-208ENST00000589216 TUBGCP5Q96RT8 1024 aa9.96□□□□□ -0.82
PTPN2-208ENST00000589216 MGME1Q9BQP7 344 aa9.96□□□□□ -0.82
PTPN2-208ENST00000589216 C1QTNF2Q9BXJ5 285 aa9.96□□□□□ -0.82
PTPN2-208ENST00000589216 SLC17A9Q9BYT1 436 aa9.96□□□□□ -0.82
PTPN2-208ENST00000589216 LACRTQ9GZZ8 138 aa9.96□□□□□ -0.82
PTPN2-208ENST00000589216 SUV39H2Q9H5I1 410 aa9.96□□□□□ -0.82
PTPN2-208ENST00000589216 NOD2Q9HC29 1040 aa9.96□□□□□ -0.82
PTPN2-208ENST00000589216 NT5MQ9NPB1 228 aa9.96□□□□□ -0.82
PTPN2-208ENST00000589216 GDF3Q9NR23 364 aa9.96□□□□□ -0.82
PTPN2-208ENST00000589216 DTLQ9NZJ0 730 aa9.96□□□□□ -0.82
PTPN2-208ENST00000589216 SEPT3Q9UH03 358 aa9.96□□□□□ -0.82
PTPN2-208ENST00000589216 TPX2Q9ULW0 747 aaKnown RBP9.96□□□□□ -0.82
PTPN2-208ENST00000589216 WASF3Q9UPY6 502 aa9.96□□□□□ -0.82
PTPN2-208ENST00000589216 PCDHA13Q9Y5I0 950 aa9.96□□□□□ -0.82
PTPN2-208ENST00000589216 SCN8AQ9UQD0 1980 aa9.95□□□□□ -0.82
PTPN2-208ENST00000589216 GOLGA4Q13439 2230 aaKnown RBP9.95□□□□□ -0.82
PTPN2-208ENST00000589216 KMT2BQ9UMN6 2715 aaPredicted RBP9.95□□□□□ -0.82
PTPN2-208ENST00000589216 A0A0U1RQS6 177 aa9.95□□□□□ -0.82
PTPN2-208ENST00000589216 NEMP1O14524 444 aa9.95□□□□□ -0.82
PTPN2-208ENST00000589216 TRAFD1O14545 582 aaPredicted RBP9.95□□□□□ -0.82
PTPN2-208ENST00000589216 FLRT2O43155 660 aa9.95□□□□□ -0.82
PTPN2-208ENST00000589216 SPOPO43791 374 aa9.95□□□□□ -0.82
PTPN2-208ENST00000589216 HLA-DQB2P05538 268 aa9.95□□□□□ -0.82
PTPN2-208ENST00000589216 C6P13671 934 aa9.95□□□□□ -0.82
PTPN2-208ENST00000589216 GM2AP17900 193 aa9.95□□□□□ -0.82
PTPN2-208ENST00000589216 SERPINA4P29622 427 aa9.95□□□□□ -0.82
PTPN2-208ENST00000589216 CDC25BP30305 580 aa9.95□□□□□ -0.82
PTPN2-208ENST00000589216 AKT2P31751 481 aa9.95□□□□□ -0.82
PTPN2-208ENST00000589216 NUDT1P36639 197 aa9.95□□□□□ -0.82
PTPN2-208ENST00000589216 ARHGAP25P42331 645 aa9.95□□□□□ -0.82
PTPN2-208ENST00000589216 MMP13P45452 471 aa9.95□□□□□ -0.82
PTPN2-208ENST00000589216 NOP2P46087 812 aaKnown RBP9.95□□□□□ -0.82
PTPN2-208ENST00000589216 AP1S1P61966 158 aa9.95□□□□□ -0.82
PTPN2-208ENST00000589216 DYNLT1P63172 113 aa9.95□□□□□ -0.82
PTPN2-208ENST00000589216 FOXK2Q01167 660 aa9.95□□□□□ -0.82
PTPN2-208ENST00000589216 ADCY2Q08462 1091 aa9.95□□□□□ -0.82
PTPN2-208ENST00000589216 CCDC15Q0P6D6 951 aa9.95□□□□□ -0.82
PTPN2-208ENST00000589216 FOXC1Q12948 553 aa9.95□□□□□ -0.82
PTPN2-208ENST00000589216 BNIP3Q12983 259 aa9.95□□□□□ -0.82
PTPN2-208ENST00000589216 STAT4Q14765 748 aa9.95□□□□□ -0.82
PTPN2-208ENST00000589216 UGP2Q16851 508 aa9.95□□□□□ -0.82
PTPN2-208ENST00000589216 ZFYVE27Q5T4F4 411 aa9.95□□□□□ -0.82
PTPN2-208ENST00000589216 SLC9A4Q6AI14 798 aa9.95□□□□□ -0.82
PTPN2-208ENST00000589216 MFSD7Q6UXD7 560 aa9.95□□□□□ -0.82
PTPN2-208ENST00000589216 KYAT3Q6YP21 454 aaKnown RBP9.95□□□□□ -0.82
PTPN2-208ENST00000589216 DBX2Q6ZNG2 339 aa9.95□□□□□ -0.82
PTPN2-208ENST00000589216 B4GALNT4Q76KP1 1039 aa9.95□□□□□ -0.82
PTPN2-208ENST00000589216 TTC7BQ86TV6 843 aa9.95□□□□□ -0.82
PTPN2-208ENST00000589216 IQCHQ86VS3 1027 aa9.95□□□□□ -0.82
PTPN2-208ENST00000589216 CCDC170Q8IYT3 715 aa9.95□□□□□ -0.82
PTPN2-208ENST00000589216 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.95□□□□□ -0.82
PTPN2-208ENST00000589216 TP53I13Q8NBR0 393 aaPredicted RBP9.95□□□□□ -0.82
PTPN2-208ENST00000589216 SAP25Q8TEE9 199 aa9.95□□□□□ -0.82
PTPN2-208ENST00000589216 MAML1Q92585 1016 aa9.95□□□□□ -0.82
PTPN2-208ENST00000589216 KRT35Q92764 455 aa9.95□□□□□ -0.82
PTPN2-208ENST00000589216 RNF25Q96BH1 459 aaPredicted RBP9.95□□□□□ -0.82
PTPN2-208ENST00000589216 BMFQ96LC9 184 aa9.95□□□□□ -0.82
PTPN2-208ENST00000589216 ZNF641Q96N77 438 aaPredicted RBP9.95□□□□□ -0.82
PTPN2-208ENST00000589216 RNF157Q96PX1 679 aa9.95□□□□□ -0.82
PTPN2-208ENST00000589216 LGMNQ99538 433 aa9.95□□□□□ -0.82
PTPN2-208ENST00000589216 HERPUD2Q9BSE4 406 aa9.95□□□□□ -0.82
PTPN2-208ENST00000589216 DESI2Q9BSY9 194 aa9.95□□□□□ -0.82
PTPN2-208ENST00000589216 CEP41Q9BYV8 373 aa9.95□□□□□ -0.82
PTPN2-208ENST00000589216 ATP13A3Q9H7F0 1226 aa9.95□□□□□ -0.82
PTPN2-208ENST00000589216 MBNL1Q9NR56 388 aaKnown RBP9.95□□□□□ -0.82
PTPN2-208ENST00000589216 TOR4AQ9NXH8 423 aa9.95□□□□□ -0.82
PTPN2-208ENST00000589216 TRIM10Q9UDY6 481 aa9.95□□□□□ -0.82
PTPN2-208ENST00000589216 LCMT1Q9UIC8 334 aa9.95□□□□□ -0.82
PTPN2-208ENST00000589216 PNMA8BQ9ULN7 279 aaPredicted RBP9.95□□□□□ -0.82
PTPN2-208ENST00000589216 ATP8A1Q9Y2Q0 1164 aa9.95□□□□□ -0.82
PTPN2-208ENST00000589216 PCDHGC4Q9Y5F7 938 aa9.95□□□□□ -0.82
PTPN2-208ENST00000589216 PCDHGB2Q9Y5G2 931 aa9.95□□□□□ -0.82
PTPN2-208ENST00000589216 DUSP10Q9Y6W6 482 aa9.95□□□□□ -0.82
PTPN2-208ENST00000589216 PLXNB3Q9ULL4 1909 aa9.94□□□□□ -0.82
PTPN2-208ENST00000589216 COL27A1Q8IZC6 1860 aaPredicted RBP9.94□□□□□ -0.82
PTPN2-208ENST00000589216 A6NNZ2 444 aa9.94□□□□□ -0.82
PTPN2-208ENST00000589216 KCNK1O00180 336 aa9.94□□□□□ -0.82
PTPN2-208ENST00000589216 RIOK3O14730 519 aaKnown RBP9.94□□□□□ -0.82
PTPN2-208ENST00000589216 PCDHGA12O60330 932 aa9.94□□□□□ -0.82
PTPN2-208ENST00000589216 ATXN1LP0C7T5 689 aaKnown RBP9.94□□□□□ -0.82
PTPN2-208ENST00000589216 KRT10P13645 584 aa9.94□□□□□ -0.82
PTPN2-208ENST00000589216 PECAM1P16284 738 aaPredicted RBP9.94□□□□□ -0.82
PTPN2-208ENST00000589216 LHCGRP22888 699 aa9.94□□□□□ -0.82
PTPN2-208ENST00000589216 CYLC1P35663 651 aaPredicted RBP9.94□□□□□ -0.82
PTPN2-208ENST00000589216 CDKN2BP42772 138 aa9.94□□□□□ -0.82
PTPN2-208ENST00000589216 DSC2Q02487 901 aa9.94□□□□□ -0.82
PTPN2-208ENST00000589216 BCL2L1Q07817 233 aa9.94□□□□□ -0.82
PTPN2-208ENST00000589216 ZBTB17Q13105 803 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms