RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 TWF2Q6IBS0 349 aaKnown RBP8.12□□□□□ -1.11
ATG4D-210ENST00000588972 GPR149Q86SP6 731 aa8.12□□□□□ -1.11
ATG4D-210ENST00000588972 HEATR4Q86WZ0 1026 aa8.12□□□□□ -1.11
ATG4D-210ENST00000588972 ZNF761Q86XN6 746 aaPredicted RBP8.12□□□□□ -1.11
ATG4D-210ENST00000588972 ZNF280BQ86YH2 543 aa8.12□□□□□ -1.11
ATG4D-210ENST00000588972 KIAA2013Q8IYS2 634 aa8.12□□□□□ -1.11
ATG4D-210ENST00000588972 VPS52Q8N1B4 723 aa8.12□□□□□ -1.11
ATG4D-210ENST00000588972 STAMQ92783 540 aa8.12□□□□□ -1.11
ATG4D-210ENST00000588972 KIFAP3Q92845 792 aa8.12□□□□□ -1.11
ATG4D-210ENST00000588972 RBM15Q96T37 977 aaKnown RBP eCLIP8.12□□□□□ -1.11
ATG4D-210ENST00000588972 RTKNQ9BST9 563 aa8.12□□□□□ -1.11
ATG4D-210ENST00000588972 C12orf65Q9H3J6 166 aaKnown RBP8.12□□□□□ -1.11
ATG4D-210ENST00000588972 FAM83DQ9H4H8 585 aa8.12□□□□□ -1.11
ATG4D-210ENST00000588972 AGPAT5Q9NUQ2 364 aa8.12□□□□□ -1.11
ATG4D-210ENST00000588972 DNMT3BQ9UBC3 853 aaKnown RBP8.12□□□□□ -1.11
ATG4D-210ENST00000588972 ATP6V1DQ9Y5K8 247 aa8.12□□□□□ -1.11
ATG4D-210ENST00000588972 MAP1BP46821 2468 aaKnown RBP8.11□□□□□ -1.11
ATG4D-210ENST00000588972 CHD6Q8TD26 2715 aa8.11□□□□□ -1.11
ATG4D-210ENST00000588972 MYMKA6NI61 221 aa8.11□□□□□ -1.11
ATG4D-210ENST00000588972 A6NLC8 198 aa8.11□□□□□ -1.11
ATG4D-210ENST00000588972 SLC16A4O15374 487 aa8.11□□□□□ -1.11
ATG4D-210ENST00000588972 DNPH1O43598 174 aa8.11□□□□□ -1.11
ATG4D-210ENST00000588972 COQ9O75208 318 aa8.11□□□□□ -1.11
ATG4D-210ENST00000588972 CXCL14O95715 111 aa8.11□□□□□ -1.11
ATG4D-210ENST00000588972 PRKCBP05771 671 aa8.11□□□□□ -1.11
ATG4D-210ENST00000588972 JUPP14923 745 aa8.11□□□□□ -1.11
ATG4D-210ENST00000588972 CAPN3P20807 821 aa8.11□□□□□ -1.11
ATG4D-210ENST00000588972 GLDCP23378 1020 aa8.11□□□□□ -1.11
ATG4D-210ENST00000588972 HOXA11P31270 313 aaPredicted RBP8.11□□□□□ -1.11
ATG4D-210ENST00000588972 ELF1P32519 619 aa8.11□□□□□ -1.11
ATG4D-210ENST00000588972 NAMPTP43490 491 aa8.11□□□□□ -1.11
ATG4D-210ENST00000588972 TUBP50607 506 aa8.11□□□□□ -1.11
ATG4D-210ENST00000588972 RAC3P60763 192 aa8.11□□□□□ -1.11
ATG4D-210ENST00000588972 PTPN14Q15678 1187 aa8.11□□□□□ -1.11
ATG4D-210ENST00000588972 ZIK1Q3SY52 487 aaPredicted RBP8.11□□□□□ -1.11
ATG4D-210ENST00000588972 UBXN11Q5T124 520 aa8.11□□□□□ -1.11
ATG4D-210ENST00000588972 RESP18Q5W5W9 173 aa8.11□□□□□ -1.11
ATG4D-210ENST00000588972 C15orf39Q6ZRI6 1047 aa8.11□□□□□ -1.11
ATG4D-210ENST00000588972 CCDC73Q6ZRK6 1079 aa8.11□□□□□ -1.11
ATG4D-210ENST00000588972 MED25Q71SY5 747 aa8.11□□□□□ -1.11
ATG4D-210ENST00000588972 TBC1D1Q86TI0 1168 aaPredicted RBP8.11□□□□□ -1.11
ATG4D-210ENST00000588972 TMEM173Q86WV6 379 aaPredicted RBP8.11□□□□□ -1.11
ATG4D-210ENST00000588972 ZBTB8OSQ8IWT0 167 aa8.11□□□□□ -1.11
ATG4D-210ENST00000588972 CFAP52Q8N1V2 620 aa8.11□□□□□ -1.11
ATG4D-210ENST00000588972 SLC22A17Q8WUG5 538 aa8.11□□□□□ -1.11
ATG4D-210ENST00000588972 DHX58Q96C10 678 aa8.11□□□□□ -1.11
ATG4D-210ENST00000588972 IGSF21Q96ID5 467 aa8.11□□□□□ -1.11
ATG4D-210ENST00000588972 IFT74Q96LB3 600 aa8.11□□□□□ -1.11
ATG4D-210ENST00000588972 NFKBIZQ9BYH8 718 aa8.11□□□□□ -1.11
ATG4D-210ENST00000588972 STK39Q9UEW8 545 aa8.11□□□□□ -1.11
ATG4D-210ENST00000588972 CDY1Q9Y6F8 540 aa8.11□□□□□ -1.11
ATG4D-210ENST00000588972 R4GN57 208 aa8.11□□□□□ -1.11
ATG4D-210ENST00000588972 FANCMQ8IYD8 2048 aa8.11□□□□□ -1.11
ATG4D-210ENST00000588972 ITIH6Q6UXX5 1313 aa8.1□□□□□ -1.11
ATG4D-210ENST00000588972 CNTNAP2Q9UHC6 1331 aa8.1□□□□□ -1.11
ATG4D-210ENST00000588972 USP24Q9UPU5 2620 aa8.1□□□□□ -1.11
ATG4D-210ENST00000588972 CACNA1GO43497 2377 aa8.1□□□□□ -1.11
ATG4D-210ENST00000588972 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.1□□□□□ -1.11
ATG4D-210ENST00000588972 A0A1B0GVL5 298 aa8.1□□□□□ -1.11
ATG4D-210ENST00000588972 MROH6A6NGR9 719 aa8.1□□□□□ -1.11
ATG4D-210ENST00000588972 DRGXA6NNA5 263 aa8.1□□□□□ -1.11
ATG4D-210ENST00000588972 POLR2DO15514 142 aaKnown RBP8.1□□□□□ -1.11
ATG4D-210ENST00000588972 PIAS2O75928 621 aa8.1□□□□□ -1.11
ATG4D-210ENST00000588972 PFKFB1P16118 471 aa8.1□□□□□ -1.11
ATG4D-210ENST00000588972 ARF4P18085 180 aaPredicted RBP8.1□□□□□ -1.11
ATG4D-210ENST00000588972 CHRM3P20309 590 aa8.1□□□□□ -1.11
ATG4D-210ENST00000588972 CASP1P29466 404 aa8.1□□□□□ -1.11
ATG4D-210ENST00000588972 SLC5A2P31639 672 aa8.1□□□□□ -1.11
ATG4D-210ENST00000588972 ALDH18A1P54886 795 aaKnown RBP8.1□□□□□ -1.11
ATG4D-210ENST00000588972 DMP1Q13316 513 aaPredicted RBP8.1□□□□□ -1.11
ATG4D-210ENST00000588972 MGAT5BQ3V5L5 792 aa8.1□□□□□ -1.11
ATG4D-210ENST00000588972 L1TD1Q5T7N2 865 aaKnown RBP8.1□□□□□ -1.11
ATG4D-210ENST00000588972 NT5DC1Q5TFE4 455 aa8.1□□□□□ -1.11
ATG4D-210ENST00000588972 MANEALQ5VSG8 457 aa8.1□□□□□ -1.11
ATG4D-210ENST00000588972 CACHD1Q5VU97 1274 aa8.1□□□□□ -1.11
ATG4D-210ENST00000588972 DRICH1Q6PGQ1 229 aaPredicted RBP8.1□□□□□ -1.11
ATG4D-210ENST00000588972 GLB1LQ6UWU2 654 aa8.1□□□□□ -1.11
ATG4D-210ENST00000588972 PCYOX1LQ8NBM8 494 aa8.1□□□□□ -1.11
ATG4D-210ENST00000588972 NEIL1Q96FI4 390 aaPredicted RBP8.1□□□□□ -1.11
ATG4D-210ENST00000588972 SMOQ99835 787 aa8.1□□□□□ -1.11
ATG4D-210ENST00000588972 DPYSL5Q9BPU6 564 aa8.1□□□□□ -1.11
ATG4D-210ENST00000588972 CPPED1Q9BRF8 314 aaPredicted RBP8.1□□□□□ -1.11
ATG4D-210ENST00000588972 TIPINQ9BVW5 301 aa8.1□□□□□ -1.11
ATG4D-210ENST00000588972 SLC46A2Q9BY10 475 aa8.1□□□□□ -1.11
ATG4D-210ENST00000588972 C2orf40Q9H1Z8 148 aa8.1□□□□□ -1.11
ATG4D-210ENST00000588972 FZD8Q9H461 694 aa8.1□□□□□ -1.11
ATG4D-210ENST00000588972 GOLPH3LQ9H4A5 285 aa8.1□□□□□ -1.11
ATG4D-210ENST00000588972 EPS8L2Q9H6S3 715 aa8.1□□□□□ -1.11
ATG4D-210ENST00000588972 SEPSECSQ9HD40 501 aaKnown RBP8.1□□□□□ -1.11
ATG4D-210ENST00000588972 DLL3Q9NYJ7 618 aa8.1□□□□□ -1.11
ATG4D-210ENST00000588972 KCND2Q9NZV8 630 aa8.1□□□□□ -1.11
ATG4D-210ENST00000588972 WNT16Q9UBV4 365 aa8.1□□□□□ -1.11
ATG4D-210ENST00000588972 ODF2LQ9ULJ1 636 aa8.1□□□□□ -1.11
ATG4D-210ENST00000588972 OAZ3Q9UMX2 235 aa8.1□□□□□ -1.11
ATG4D-210ENST00000588972 SHOC2Q9UQ13 582 aa8.1□□□□□ -1.11
ATG4D-210ENST00000588972 CDYLQ9Y232 598 aa8.1□□□□□ -1.11
ATG4D-210ENST00000588972 HPSEQ9Y251 543 aa8.1□□□□□ -1.11
ATG4D-210ENST00000588972 HES2Q9Y543 173 aa8.1□□□□□ -1.11
ATG4D-210ENST00000588972 TDRD15B5MCY1 1934 aaKnown RBP8.09□□□□□ -1.11
ATG4D-210ENST00000588972 PHLPP2Q6ZVD8 1323 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms