RNA–Protein interactions for RNA: ENST00000588703.5

HDAC5-209, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 445 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-209ENST00000588703 CAMK1DQ8IU85 385 aa18.21■□□□□ 0.51
HDAC5-209ENST00000588703 LZTR1Q8N653 840 aa18.21■□□□□ 0.51
HDAC5-209ENST00000588703 ZNF564Q8TBZ8 553 aaPredicted RBP18.21■□□□□ 0.51
HDAC5-209ENST00000588703 HCAR2Q8TDS4 363 aa18.21■□□□□ 0.51
HDAC5-209ENST00000588703 CXorf40AQ8TE69 158 aa18.21■□□□□ 0.51
HDAC5-209ENST00000588703 NSMCE3Q96MG7 304 aa18.21■□□□□ 0.51
HDAC5-209ENST00000588703 WRAP53Q9BUR4 548 aaKnown RBP18.21■□□□□ 0.51
HDAC5-209ENST00000588703 CINPQ9BW66 212 aaPredicted RBP18.21■□□□□ 0.51
HDAC5-209ENST00000588703 PACSIN1Q9BY11 444 aa18.21■□□□□ 0.51
HDAC5-209ENST00000588703 PCDH12Q9NPG4 1184 aa18.21■□□□□ 0.51
HDAC5-209ENST00000588703 PCDHGA1Q9Y5H4 931 aa18.21■□□□□ 0.51
HDAC5-209ENST00000588703 ZFHX4Q86UP3 3567 aa18.21■□□□□ 0.51
HDAC5-209ENST00000588703 ITPR1Q14643 2758 aa18.2■□□□□ 0.5
HDAC5-209ENST00000588703 ZFYVE26Q68DK2 2539 aa18.2■□□□□ 0.5
HDAC5-209ENST00000588703 SPTY2D1-AS1A0A0U1RR47 76 aa18.2■□□□□ 0.5
HDAC5-209ENST00000588703 MYO1FO00160 1098 aa18.2■□□□□ 0.5
HDAC5-209ENST00000588703 CBFA2T2O43439 604 aa18.2■□□□□ 0.5
HDAC5-209ENST00000588703 PEX11BO96011 259 aa18.2■□□□□ 0.5
HDAC5-209ENST00000588703 SUOXP51687 545 aa18.2■□□□□ 0.5
HDAC5-209ENST00000588703 TRIM14Q14142 442 aa18.2■□□□□ 0.5
HDAC5-209ENST00000588703 RFTN1Q14699 578 aaPredicted RBP18.2■□□□□ 0.5
HDAC5-209ENST00000588703 GRM3Q14832 879 aa18.2■□□□□ 0.5
HDAC5-209ENST00000588703 UGP2Q16851 508 aa18.2■□□□□ 0.5
HDAC5-209ENST00000588703 TMCO3Q6UWJ1 677 aa18.2■□□□□ 0.5
HDAC5-209ENST00000588703 VSTM4Q8IW00 320 aa18.2■□□□□ 0.5
HDAC5-209ENST00000588703 OR8K1Q8NGG5 319 aa18.2■□□□□ 0.5
HDAC5-209ENST00000588703 ZNF641Q96N77 438 aaPredicted RBP18.2■□□□□ 0.5
HDAC5-209ENST00000588703 TUBGCP5Q96RT8 1024 aa18.2■□□□□ 0.5
HDAC5-209ENST00000588703 DNAJC28Q9NX36 388 aa18.2■□□□□ 0.5
HDAC5-209ENST00000588703 KLF15Q9UIH9 416 aa18.2■□□□□ 0.5
HDAC5-209ENST00000588703 FAM149AA5PLN7 773 aa18.19■□□□□ 0.5
HDAC5-209ENST00000588703 SIGLEC6O43699 453 aa18.19■□□□□ 0.5
HDAC5-209ENST00000588703 RFPL3O75679 317 aa18.19■□□□□ 0.5
HDAC5-209ENST00000588703 TM7SF2O76062 418 aa18.19■□□□□ 0.5
HDAC5-209ENST00000588703 CD48P09326 243 aa18.19■□□□□ 0.5
HDAC5-209ENST00000588703 XPAP23025 273 aaPredicted RBP18.19■□□□□ 0.5
HDAC5-209ENST00000588703 IL4RP24394 825 aa18.19■□□□□ 0.5
HDAC5-209ENST00000588703 MMP12P39900 470 aa18.19■□□□□ 0.5
HDAC5-209ENST00000588703 ARSEP51690 589 aa18.19■□□□□ 0.5
HDAC5-209ENST00000588703 CLDN6P56747 220 aa18.19■□□□□ 0.5
HDAC5-209ENST00000588703 NSUN2Q08J23 767 aaKnown RBP eCLIP18.19■□□□□ 0.5
HDAC5-209ENST00000588703 SLC10A7Q0GE19 358 aa18.19■□□□□ 0.5
HDAC5-209ENST00000588703 ELP6Q0PNE2 266 aa18.19■□□□□ 0.5
HDAC5-209ENST00000588703 PDE1CQ14123 709 aaPredicted RBP18.19■□□□□ 0.5
HDAC5-209ENST00000588703 SLC18A3Q16572 532 aa18.19■□□□□ 0.5
HDAC5-209ENST00000588703 TMCO4Q5TGY1 634 aa18.19■□□□□ 0.5
HDAC5-209ENST00000588703 BRAT1Q6PJG6 821 aa18.19■□□□□ 0.5
HDAC5-209ENST00000588703 PARGQ86W56 976 aa18.19■□□□□ 0.5
HDAC5-209ENST00000588703 GALNT15Q8N3T1 639 aa18.19■□□□□ 0.5
HDAC5-209ENST00000588703 TP53I13Q8NBR0 393 aaPredicted RBP18.19■□□□□ 0.5
HDAC5-209ENST00000588703 RNF214Q8ND24 703 aa18.19■□□□□ 0.5
HDAC5-209ENST00000588703 OR4C6Q8NH72 309 aa18.19■□□□□ 0.5
HDAC5-209ENST00000588703 FAM71BQ8TC56 605 aa18.19■□□□□ 0.5
HDAC5-209ENST00000588703 ECHDC3Q96DC8 303 aa18.19■□□□□ 0.5
HDAC5-209ENST00000588703 ZNF599Q96NL3 588 aa18.19■□□□□ 0.5
HDAC5-209ENST00000588703 PSKH2Q96QS6 385 aa18.19■□□□□ 0.5
HDAC5-209ENST00000588703 ATP13A3Q9H7F0 1226 aa18.19■□□□□ 0.5
HDAC5-209ENST00000588703 MBNL1Q9NR56 388 aaKnown RBP18.19■□□□□ 0.5
HDAC5-209ENST00000588703 SEPT3Q9UH03 358 aa18.19■□□□□ 0.5
HDAC5-209ENST00000588703 COQ6Q9Y2Z9 468 aa18.19■□□□□ 0.5
HDAC5-209ENST00000588703 ASXL3Q9C0F0 2248 aa18.19■□□□□ 0.5
HDAC5-209ENST00000588703 LAMA5O15230 3695 aa18.19■□□□□ 0.5
HDAC5-209ENST00000588703 RIOK3O14730 519 aaKnown RBP18.18■□□□□ 0.5
HDAC5-209ENST00000588703 FFAR2O15552 330 aa18.18■□□□□ 0.5
HDAC5-209ENST00000588703 CSF2P04141 144 aa18.18■□□□□ 0.5
HDAC5-209ENST00000588703 PRKCGP05129 697 aa18.18■□□□□ 0.5
HDAC5-209ENST00000588703 NME1P15531 152 aaKnown RBP18.18■□□□□ 0.5
HDAC5-209ENST00000588703 CKMT2P17540 419 aa18.18■□□□□ 0.5
HDAC5-209ENST00000588703 SERPINA4P29622 427 aa18.18■□□□□ 0.5
HDAC5-209ENST00000588703 CDH6P55285 790 aa18.18■□□□□ 0.5
HDAC5-209ENST00000588703 SEMG2Q02383 582 aa18.18■□□□□ 0.5
HDAC5-209ENST00000588703 EIF2B5Q13144 721 aaKnown RBP18.18■□□□□ 0.5
HDAC5-209ENST00000588703 MMRN1Q13201 1228 aa18.18■□□□□ 0.5
HDAC5-209ENST00000588703 ZNF211Q13398 564 aaPredicted RBP18.18■□□□□ 0.5
HDAC5-209ENST00000588703 CAMK2BQ13554 666 aa18.18■□□□□ 0.5
HDAC5-209ENST00000588703 LBRQ14739 615 aaKnown RBP18.18■□□□□ 0.5
HDAC5-209ENST00000588703 PGBD5Q8N414 524 aa18.18■□□□□ 0.5
HDAC5-209ENST00000588703 CTTNBP2NLQ9P2B4 639 aa18.18■□□□□ 0.5
HDAC5-209ENST00000588703 RCOR3Q9P2K3 495 aaPredicted RBP18.18■□□□□ 0.5
HDAC5-209ENST00000588703 UVRAGQ9P2Y5 699 aa18.18■□□□□ 0.5
HDAC5-209ENST00000588703 PNMA8BQ9ULN7 279 aaPredicted RBP18.18■□□□□ 0.5
HDAC5-209ENST00000588703 ATP8A1Q9Y2Q0 1164 aa18.18■□□□□ 0.5
HDAC5-209ENST00000588703 CELSR3Q9NYQ7 3312 aa18.18■□□□□ 0.5
HDAC5-209ENST00000588703 FAM208BQ5VWN6 2430 aa18.17■□□□□ 0.5
HDAC5-209ENST00000588703 SSU72P8A0A1W2PR75 194 aa18.17■□□□□ 0.5
HDAC5-209ENST00000588703 TTC24A2A3L6 582 aaPredicted RBP18.17■□□□□ 0.5
HDAC5-209ENST00000588703 TAF4O00268 1085 aa18.17■□□□□ 0.5
HDAC5-209ENST00000588703 TRAFD1O14545 582 aaPredicted RBP18.17■□□□□ 0.5
HDAC5-209ENST00000588703 MAFKO60675 156 aa18.17■□□□□ 0.5
HDAC5-209ENST00000588703 MFAP3LO75121 409 aa18.17■□□□□ 0.5
HDAC5-209ENST00000588703 PROSCO94903 275 aa18.17■□□□□ 0.5
HDAC5-209ENST00000588703 C1SP09871 688 aa18.17■□□□□ 0.5
HDAC5-209ENST00000588703 C6P13671 934 aa18.17■□□□□ 0.5
HDAC5-209ENST00000588703 ACP1P24666 158 aa18.17■□□□□ 0.5
HDAC5-209ENST00000588703 SSR1P43307 286 aaKnown RBP18.17■□□□□ 0.5
HDAC5-209ENST00000588703 TAS2R40P59535 323 aa18.17■□□□□ 0.5
HDAC5-209ENST00000588703 HNRNPKP61978 463 aaKnown RBP eCLIP18.17■□□□□ 0.51e-6■■■□□ 19.1
HDAC5-209ENST00000588703 KRT81Q14533 505 aa18.17■□□□□ 0.5
HDAC5-209ENST00000588703 IRF4Q15306 451 aa18.17■□□□□ 0.5
HDAC5-209ENST00000588703 ATP13A4Q4VNC1 1196 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms