RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 TGM2P21980 687 aa10.2□□□□□ -0.78
TPM4-207ENST00000588032 CTNNA1P35221 906 aaKnown RBP10.2□□□□□ -0.78
TPM4-207ENST00000588032 CETN2P41208 172 aa10.2□□□□□ -0.78
TPM4-207ENST00000588032 ABL2P42684 1182 aa10.2□□□□□ -0.78
TPM4-207ENST00000588032 CDKN2BP42772 138 aa10.2□□□□□ -0.78
TPM4-207ENST00000588032 CTSKP43235 329 aa10.2□□□□□ -0.78
TPM4-207ENST00000588032 RGRP47804 291 aa10.2□□□□□ -0.78
TPM4-207ENST00000588032 FOXK2Q01167 660 aa10.2□□□□□ -0.78
TPM4-207ENST00000588032 BNC1Q01954 994 aa10.2□□□□□ -0.78
TPM4-207ENST00000588032 GBE1Q04446 702 aa10.2□□□□□ -0.78
TPM4-207ENST00000588032 PPIDQ08752 370 aaKnown RBP10.2□□□□□ -0.78
TPM4-207ENST00000588032 SLC10A2Q12908 348 aaPredicted RBP10.2□□□□□ -0.78
TPM4-207ENST00000588032 TMEM52BQ4KMG9 183 aa10.2□□□□□ -0.78
TPM4-207ENST00000588032 TFDP3Q5H9I0 405 aa10.2□□□□□ -0.78
TPM4-207ENST00000588032 MFSD7Q6UXD7 560 aa10.2□□□□□ -0.78
TPM4-207ENST00000588032 SPOCD1Q6ZMY3 1216 aa10.2□□□□□ -0.78
TPM4-207ENST00000588032 RFX6Q8HWS3 928 aa10.2□□□□□ -0.78
TPM4-207ENST00000588032 DCP2Q8IU60 420 aaKnown RBP10.2□□□□□ -0.78
TPM4-207ENST00000588032 CCDC13Q8IYE1 715 aa10.2□□□□□ -0.78
TPM4-207ENST00000588032 OXR1Q8N573 874 aa10.2□□□□□ -0.78
TPM4-207ENST00000588032 RNF10Q8N5U6 811 aaKnown RBP10.2□□□□□ -0.78
TPM4-207ENST00000588032 PAF1Q8N7H5 531 aa10.2□□□□□ -0.78
TPM4-207ENST00000588032 TMEM145Q8NBT3 493 aa10.2□□□□□ -0.78
TPM4-207ENST00000588032 ACRBPQ8NEB7 543 aa10.2□□□□□ -0.78
TPM4-207ENST00000588032 KLHDC7BQ96G42 594 aa10.2□□□□□ -0.78
TPM4-207ENST00000588032 C1QTNF7Q9BXJ2 289 aa10.2□□□□□ -0.78
TPM4-207ENST00000588032 TSGA10Q9BZW7 698 aa10.2□□□□□ -0.78
TPM4-207ENST00000588032 POLR1EQ9GZS1 481 aaKnown RBP10.2□□□□□ -0.78
TPM4-207ENST00000588032 GDF3Q9NR23 364 aa10.2□□□□□ -0.78
TPM4-207ENST00000588032 SALL4Q9UJQ4 1053 aa10.2□□□□□ -0.78
TPM4-207ENST00000588032 EFR3BQ9Y2G0 817 aa10.2□□□□□ -0.78
TPM4-207ENST00000588032 PCDHA3Q9Y5H8 950 aa10.2□□□□□ -0.78
TPM4-207ENST00000588032 HEY1Q9Y5J3 304 aa10.2□□□□□ -0.78
TPM4-207ENST00000588032 SNX11Q9Y5W9 270 aa10.2□□□□□ -0.78
TPM4-207ENST00000588032 SLCO1B1Q9Y6L6 691 aa10.2□□□□□ -0.78
TPM4-207ENST00000588032 DUSP10Q9Y6W6 482 aa10.2□□□□□ -0.78
TPM4-207ENST00000588032 GVINP1Q7Z2Y8 2422 aa10.19□□□□□ -0.78
TPM4-207ENST00000588032 IGLON5A6NGN9 336 aa10.19□□□□□ -0.78
TPM4-207ENST00000588032 TRAFD1O14545 582 aaPredicted RBP10.19□□□□□ -0.78
TPM4-207ENST00000588032 TOR1BO14657 336 aa10.19□□□□□ -0.78
TPM4-207ENST00000588032 RIOK3O14730 519 aaKnown RBP10.19□□□□□ -0.78
TPM4-207ENST00000588032 HTRA2O43464 458 aaPredicted RBP10.19□□□□□ -0.78
TPM4-207ENST00000588032 KRT86O43790 486 aa10.19□□□□□ -0.78
TPM4-207ENST00000588032 TM7SF2O76062 418 aa10.19□□□□□ -0.78
TPM4-207ENST00000588032 WNT1P04628 370 aa10.19□□□□□ -0.78
TPM4-207ENST00000588032 KRT10P13645 584 aa10.19□□□□□ -0.78
TPM4-207ENST00000588032 CEACAM1P13688 526 aa10.19□□□□□ -0.78
TPM4-207ENST00000588032 CTNNA2P26232 953 aa10.19□□□□□ -0.78
TPM4-207ENST00000588032 ARRB1P49407 418 aaPredicted RBP10.19□□□□□ -0.78
TPM4-207ENST00000588032 ITKQ08881 620 aa10.19□□□□□ -0.78
TPM4-207ENST00000588032 PPP2R5EQ16537 467 aa10.19□□□□□ -0.78
TPM4-207ENST00000588032 ZNF423Q2M1K9 1284 aa10.19□□□□□ -0.78
TPM4-207ENST00000588032 SEL1L3Q68CR1 1132 aa10.19□□□□□ -0.78
TPM4-207ENST00000588032 ALG1LQ6GMV1 187 aa10.19□□□□□ -0.78
TPM4-207ENST00000588032 DBX2Q6ZNG2 339 aa10.19□□□□□ -0.78
TPM4-207ENST00000588032 NDUFAF2Q8N183 169 aa10.19□□□□□ -0.78
TPM4-207ENST00000588032 PGBD5Q8N414 524 aa10.19□□□□□ -0.78
TPM4-207ENST00000588032 DENND6BQ8NEG7 585 aa10.19□□□□□ -0.78
TPM4-207ENST00000588032 CXorf40AQ8TE69 158 aa10.19□□□□□ -0.78
TPM4-207ENST00000588032 GOLPH3Q9H4A6 298 aa10.19□□□□□ -0.78
TPM4-207ENST00000588032 GRPEL1Q9HAV7 217 aa10.19□□□□□ -0.78
TPM4-207ENST00000588032 NOD2Q9HC29 1040 aa10.19□□□□□ -0.78
TPM4-207ENST00000588032 NT5MQ9NPB1 228 aa10.19□□□□□ -0.78
TPM4-207ENST00000588032 TM7SF3Q9NS93 570 aa10.19□□□□□ -0.78
TPM4-207ENST00000588032 RBM22Q9NW64 420 aaKnown RBP eCLIP10.19□□□□□ -0.78
TPM4-207ENST00000588032 PHTF1Q9UMS5 762 aa10.19□□□□□ -0.78
TPM4-207ENST00000588032 ATP8A1Q9Y2Q0 1164 aa10.19□□□□□ -0.78
TPM4-207ENST00000588032 NUMA1Q14980 2115 aa10.19□□□□□ -0.78
TPM4-207ENST00000588032 PCDH15Q96QU1 1955 aa10.18□□□□□ -0.78
TPM4-207ENST00000588032 GRID2IPA4D2P6 1211 aa10.18□□□□□ -0.78
TPM4-207ENST00000588032 GOLGA6L3A6NEY3 463 aa10.18□□□□□ -0.78
TPM4-207ENST00000588032 A6NNZ2 444 aa10.18□□□□□ -0.78
TPM4-207ENST00000588032 MIF4GDA9UHW6 222 aaKnown RBP10.18□□□□□ -0.78
TPM4-207ENST00000588032 FPGTO14772 594 aa10.18□□□□□ -0.78
TPM4-207ENST00000588032 WNT9AO14904 365 aa10.18□□□□□ -0.78
TPM4-207ENST00000588032 FLRT2O43155 660 aa10.18□□□□□ -0.78
TPM4-207ENST00000588032 SPINT1O43278 529 aa10.18□□□□□ -0.78
TPM4-207ENST00000588032 MTSS1O43312 755 aa10.18□□□□□ -0.78
TPM4-207ENST00000588032 PCDHGA12O60330 932 aa10.18□□□□□ -0.78
TPM4-207ENST00000588032 CST8O60676 142 aa10.18□□□□□ -0.78
TPM4-207ENST00000588032 CD59P13987 128 aa10.18□□□□□ -0.78
TPM4-207ENST00000588032 PRLRP16471 622 aa10.18□□□□□ -0.78
TPM4-207ENST00000588032 CA4P22748 312 aa10.18□□□□□ -0.78
TPM4-207ENST00000588032 RXRGP48443 463 aa10.18□□□□□ -0.78
TPM4-207ENST00000588032 CCT8P50990 548 aa10.18□□□□□ -0.78
TPM4-207ENST00000588032 RWDD2BP57060 319 aa10.18□□□□□ -0.78
TPM4-207ENST00000588032 NXPH1P58417 271 aa10.18□□□□□ -0.78
TPM4-207ENST00000588032 MAXP61244 160 aa10.18□□□□□ -0.78
TPM4-207ENST00000588032 IFI35P80217 286 aaPredicted RBP10.18□□□□□ -0.78
TPM4-207ENST00000588032 FGL2Q14314 439 aa10.18□□□□□ -0.78
TPM4-207ENST00000588032 AGERQ15109 404 aa10.18□□□□□ -0.78
TPM4-207ENST00000588032 ARMC12Q5T9G4 340 aa10.18□□□□□ -0.78
TPM4-207ENST00000588032 PEX26Q7Z412 305 aa10.18□□□□□ -0.78
TPM4-207ENST00000588032 ABI3BPQ7Z7G0 1075 aa10.18□□□□□ -0.78
TPM4-207ENST00000588032 PIP4P1Q86T03 277 aa10.18□□□□□ -0.78
TPM4-207ENST00000588032 CCDC50Q8IVM0 306 aa10.18□□□□□ -0.78
TPM4-207ENST00000588032 LRRC8AQ8IWT6 810 aa10.18□□□□□ -0.78
TPM4-207ENST00000588032 UBL4BQ8N7F7 174 aa10.18□□□□□ -0.78
TPM4-207ENST00000588032 LRRC57Q8N9N7 239 aa10.18□□□□□ -0.78
TPM4-207ENST00000588032 P3H4Q92791 437 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms