RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 NOTCH4Q99466 2003 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.83□□□□□ -1.48
SDF2-206ENST00000587788 FAM237BA0A1B0GVD1 139 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 WDR27A2RRH5 827 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 YJEFN3A6XGL0 299 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 CXorf49A8MYA2 514 aaPredicted RBP5.83□□□□□ -1.48
SDF2-206ENST00000587788 HHLA1C9JL84 531 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 H3BQ06 376 aaPredicted RBP5.83□□□□□ -1.48
SDF2-206ENST00000587788 GOLGA8RI6L899 631 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 CLDN5O00501 218 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 PER2O15055 1255 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 HCRTO43612 131 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 CREB3O43889 395 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 ANXA9O76027 345 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 USP1O94782 785 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 ABLIM3O94929 683 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 CXCL14O95715 111 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 AP2A1O95782 977 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 MPOP05164 745 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 FYNP06241 537 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 APOA4P06727 396 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 SLC2A3P11169 496 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 EPXP11678 715 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 MYL4P12829 197 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 NCAM1P13591 858 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 VAV1P15498 845 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 ERCC2P18074 760 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 CALB2P22676 271 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 PTPN4P29074 926 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 ELF1P32519 619 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 SPRP35270 261 aaPredicted RBP5.83□□□□□ -1.48
SDF2-206ENST00000587788 GP5P40197 560 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 NRIP1P48552 1158 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 SERPINB8P50452 374 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 KPNA1P52294 538 aaPredicted RBP5.83□□□□□ -1.48
SDF2-206ENST00000587788 GTF2A1P52655 376 aaPredicted RBP5.83□□□□□ -1.48
SDF2-206ENST00000587788 HK2P52789 917 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 PRKAA2P54646 552 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 RACK1P63244 317 aaKnown RBP5.83□□□□□ -1.48
SDF2-206ENST00000587788 NIPAL4Q0D2K0 466 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 WASHC5Q12768 1159 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 STX3Q13277 289 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 RAB33AQ14088 237 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 CRYMQ14894 314 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 CCDC153Q494R4 210 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 PREPLQ4J6C6 727 aaPredicted RBP5.83□□□□□ -1.48
SDF2-206ENST00000587788 PABPC1LQ4VXU2 614 aaKnown RBP5.83□□□□□ -1.48
SDF2-206ENST00000587788 SLC39A12Q504Y0 691 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 WLSQ5T9L3 541 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 FAXCQ5TGI0 409 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 OTUD1Q5VV17 481 aaPredicted RBP5.83□□□□□ -1.48
SDF2-206ENST00000587788 SYPL2Q5VXT5 272 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 NAPEPLDQ6IQ20 393 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 PACS1Q6VY07 963 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 C1orf229Q6ZS94 237 aaPredicted RBP5.83□□□□□ -1.48
SDF2-206ENST00000587788 DENND5BQ6ZUT9 1274 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 TAS1R1Q7RTX1 841 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 VN1R5Q7Z5H4 357 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 CLNKQ7Z7G1 428 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 RBM23Q86U06 439 aaKnown RBP5.83□□□□□ -1.48
SDF2-206ENST00000587788 CRLF3Q8IUI8 442 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 CCDC117Q8IWD4 279 aaPredicted RBP5.83□□□□□ -1.48
SDF2-206ENST00000587788 KLHDC8BQ8IXV7 354 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 RNF168Q8IYW5 571 aaPredicted RBP5.83□□□□□ -1.48
SDF2-206ENST00000587788 ZNF567Q8N184 647 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 GABPB2Q8TAK5 448 aaPredicted RBP5.83□□□□□ -1.48
SDF2-206ENST00000587788 HASPINQ8TF76 798 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 IRF7Q92985 503 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 FATE1Q969F0 183 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 MYLPFQ96A32 169 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 ACDQ96AP0 544 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 OXNAD1Q96HP4 312 aaPredicted RBP5.83□□□□□ -1.48
SDF2-206ENST00000587788 NSL1Q96IY1 281 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 FAM111AQ96PZ2 611 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 CDK5RAP1Q96SZ6 601 aaKnown RBP5.83□□□□□ -1.48
SDF2-206ENST00000587788 KCNK16Q96T55 309 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 LGMNQ99538 433 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 TCF25Q9BQ70 676 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 RSRP1Q9BUV0 290 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 IL22Q9GZX6 179 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 WWP1Q9H0M0 922 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 ZBP1Q9H171 429 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 MUC3BQ9H195 1237 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 GBA3Q9H227 469 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 MMADHCQ9H3L0 296 aaPredicted RBP5.83□□□□□ -1.48
SDF2-206ENST00000587788 IGFLR1Q9H665 355 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 CATSPERBQ9H7T0 1116 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 UBE2ZQ9H832 354 aaPredicted RBP5.83□□□□□ -1.48
SDF2-206ENST00000587788 PLAC1Q9HBJ0 212 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 WDR6Q9NNW5 1121 aaKnown RBP5.83□□□□□ -1.48
SDF2-206ENST00000587788 CASS4Q9NQ75 786 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 OR12D3Q9UGF7 316 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 AFF4Q9UHB7 1163 aaKnown RBP5.83□□□□□ -1.48
SDF2-206ENST00000587788 BAIAP2L1Q9UHR4 511 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 GGT7Q9UJ14 662 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 SCML2Q9UQR0 700 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 AAR2Q9Y312 384 aaKnown RBP5.83□□□□□ -1.48
SDF2-206ENST00000587788 ASB3Q9Y575 518 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 IRAK3Q9Y616 596 aa5.83□□□□□ -1.48
SDF2-206ENST00000587788 DENND4CQ5VZ89 1909 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms