RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 TIMM44O43615 452 aa20■□□□□ 0.79
TRIM47-204ENST00000587339 LDB2O43679 373 aa20■□□□□ 0.79
TRIM47-204ENST00000587339 RALGPS1Q5JS13 557 aa20■□□□□ 0.79
TRIM47-204ENST00000587339 NCEH1Q6PIU2 408 aa20■□□□□ 0.79
TRIM47-204ENST00000587339 METTL3Q86U44 580 aaKnown RBP20■□□□□ 0.79
TRIM47-204ENST00000587339 ADGRG2Q8IZP9 1017 aa20■□□□□ 0.79
TRIM47-204ENST00000587339 VN1R2Q8NFZ6 395 aa20■□□□□ 0.79
TRIM47-204ENST00000587339 OR13J1Q8NGT2 312 aa20■□□□□ 0.79
TRIM47-204ENST00000587339 ADGRE3Q9BY15 652 aa20■□□□□ 0.79
TRIM47-204ENST00000587339 MKS1Q9NXB0 559 aa20■□□□□ 0.79
TRIM47-204ENST00000587339 WNT6Q9Y6F9 365 aa20■□□□□ 0.79
TRIM47-204ENST00000587339 PDE4DIPQ5VU43 2346 aa19.99■□□□□ 0.79
TRIM47-204ENST00000587339 EPOPA6NHQ4 379 aa19.99■□□□□ 0.79
TRIM47-204ENST00000587339 PRKCGP05129 697 aa19.99■□□□□ 0.79
TRIM47-204ENST00000587339 F7P08709 466 aaPredicted RBP19.99■□□□□ 0.79
TRIM47-204ENST00000587339 TYRP14679 529 aa19.99■□□□□ 0.79
TRIM47-204ENST00000587339 KCNC3Q14003 757 aa19.99■□□□□ 0.79
TRIM47-204ENST00000587339 UGP2Q16851 508 aa19.99■□□□□ 0.79
TRIM47-204ENST00000587339 PITRM1Q5JRX3 1037 aa19.99■□□□□ 0.79
TRIM47-204ENST00000587339 CDHR3Q6ZTQ4 885 aa19.99■□□□□ 0.79
TRIM47-204ENST00000587339 LRRC34Q8IZ02 419 aa19.99■□□□□ 0.79
TRIM47-204ENST00000587339 CELF5Q8N6W0 485 aaKnown RBP19.99■□□□□ 0.79
TRIM47-204ENST00000587339 ZNF557Q8N988 423 aaPredicted RBP19.99■□□□□ 0.79
TRIM47-204ENST00000587339 GABPB2Q8TAK5 448 aaPredicted RBP19.99■□□□□ 0.79
TRIM47-204ENST00000587339 LMLNQ96KR4 655 aa19.99■□□□□ 0.79
TRIM47-204ENST00000587339 FAM111AQ96PZ2 611 aa19.99■□□□□ 0.79
TRIM47-204ENST00000587339 CDCA3Q99618 268 aaPredicted RBP19.99■□□□□ 0.79
TRIM47-204ENST00000587339 FAM167BQ9BTA0 163 aa19.99■□□□□ 0.79
TRIM47-204ENST00000587339 TM6SF2Q9BZW4 377 aa19.99■□□□□ 0.79
TRIM47-204ENST00000587339 GRID1Q9ULK0 1009 aa19.99■□□□□ 0.79
TRIM47-204ENST00000587339 SLC9A3R1O14745 358 aaPredicted RBP19.98■□□□□ 0.79
TRIM47-204ENST00000587339 SMAD6O43541 496 aaKnown RBP19.98■□□□□ 0.79
TRIM47-204ENST00000587339 PAPLNO95428 1278 aa19.98■□□□□ 0.79
TRIM47-204ENST00000587339 PRLP01236 227 aa19.98■□□□□ 0.79
TRIM47-204ENST00000587339 PDHA1P08559 390 aa19.98■□□□□ 0.79
TRIM47-204ENST00000587339 PIRTP0C851 137 aa19.98■□□□□ 0.79
TRIM47-204ENST00000587339 DRD4P21917 467 aa19.98■□□□□ 0.79
TRIM47-204ENST00000587339 TYK2P29597 1187 aa19.98■□□□□ 0.79
TRIM47-204ENST00000587339 SLC20A2Q08357 652 aa19.98■□□□□ 0.79
TRIM47-204ENST00000587339 LY6G5CQ5SRR4 150 aa19.98■□□□□ 0.79
TRIM47-204ENST00000587339 ATXN7L2Q5T6C5 722 aaPredicted RBP19.98■□□□□ 0.79
TRIM47-204ENST00000587339 NEPROQ6NW34 567 aa19.98■□□□□ 0.79
TRIM47-204ENST00000587339 DENND6AQ8IWF6 608 aa19.98■□□□□ 0.79
TRIM47-204ENST00000587339 DCLK2Q8N568 766 aa19.98■□□□□ 0.79
TRIM47-204ENST00000587339 PDCD6IPQ8WUM4 868 aaKnown RBP19.98■□□□□ 0.79
TRIM47-204ENST00000587339 PEX13Q92968 403 aa19.98■□□□□ 0.79
TRIM47-204ENST00000587339 VPS39Q96JC1 886 aa19.98■□□□□ 0.79
TRIM47-204ENST00000587339 MCMBPQ9BTE3 642 aa19.98■□□□□ 0.79
TRIM47-204ENST00000587339 SIN3BO75182 1162 aa19.98■□□□□ 0.79
TRIM47-204ENST00000587339 CRHR1P34998 444 aa19.98■□□□□ 0.79
TRIM47-204ENST00000587339 CTBP1Q13363 440 aa19.98■□□□□ 0.79
TRIM47-204ENST00000587339 PDK4Q16654 411 aa19.98■□□□□ 0.79
TRIM47-204ENST00000587339 ZNF470Q6ECI4 717 aa19.98■□□□□ 0.79
TRIM47-204ENST00000587339 SRLQ86TD4 932 aa19.98■□□□□ 0.79
TRIM47-204ENST00000587339 LPCAT1Q8NF37 534 aa19.98■□□□□ 0.79
TRIM47-204ENST00000587339 CALML6Q8TD86 181 aa19.98■□□□□ 0.79
TRIM47-204ENST00000587339 PPP2R3CQ969Q6 453 aa19.98■□□□□ 0.79
TRIM47-204ENST00000587339 IGFLR1Q9H665 355 aa19.98■□□□□ 0.79
TRIM47-204ENST00000587339 GGT7Q9UJ14 662 aa19.98■□□□□ 0.79
TRIM47-204ENST00000587339 PLLPQ9Y342 182 aa19.98■□□□□ 0.79
TRIM47-204ENST00000587339 ARL5AQ9Y689 179 aa19.98■□□□□ 0.79
TRIM47-204ENST00000587339 BPTFQ12830 3046 aa19.97■□□□□ 0.79
TRIM47-204ENST00000587339 CXorf51AA0A1B0GTR3 108 aa19.97■□□□□ 0.79
TRIM47-204ENST00000587339 AHSGP02765 367 aa19.97■□□□□ 0.79
TRIM47-204ENST00000587339 FOXN2P32314 431 aa19.97■□□□□ 0.79
TRIM47-204ENST00000587339 ETV4P43268 484 aa19.97■□□□□ 0.79
TRIM47-204ENST00000587339 ABCG1P45844 678 aa19.97■□□□□ 0.79
TRIM47-204ENST00000587339 SERPINB8P50452 374 aa19.97■□□□□ 0.79
TRIM47-204ENST00000587339 AP1S1P61966 158 aa19.97■□□□□ 0.79
TRIM47-204ENST00000587339 PRAMEP78395 509 aa19.97■□□□□ 0.79
TRIM47-204ENST00000587339 TRAF2Q12933 501 aa19.97■□□□□ 0.79
TRIM47-204ENST00000587339 QPCTQ16769 361 aa19.97■□□□□ 0.79
TRIM47-204ENST00000587339 FUT11Q495W5 492 aa19.97■□□□□ 0.79
TRIM47-204ENST00000587339 ZC3HC1Q86WB0 502 aaKnown RBP19.97■□□□□ 0.79
TRIM47-204ENST00000587339 RPL10LQ96L21 214 aaKnown RBP19.97■□□□□ 0.79
TRIM47-204ENST00000587339 NSRP1Q9H0G5 558 aaKnown RBP19.97■□□□□ 0.79
TRIM47-204ENST00000587339 VPS11Q9H270 941 aa19.97■□□□□ 0.79
TRIM47-204ENST00000587339 RHOJQ9H4E5 214 aa19.97■□□□□ 0.79
TRIM47-204ENST00000587339 SNX15Q9NRS6 342 aa19.97■□□□□ 0.79
TRIM47-204ENST00000587339 DZANK1Q9NVP4 752 aa19.97■□□□□ 0.79
TRIM47-204ENST00000587339 GGA2Q9UJY4 613 aa19.97■□□□□ 0.79
TRIM47-204ENST00000587339 MTO1Q9Y2Z2 717 aaKnown RBP19.97■□□□□ 0.79
TRIM47-204ENST00000587339 KCTD3Q9Y597 815 aa19.97■□□□□ 0.79
TRIM47-204ENST00000587339 ATG2AQ2TAZ0 1938 aa19.96■□□□□ 0.79
TRIM47-204ENST00000587339 ANKRD66B4E2M5 251 aa19.96■□□□□ 0.79
TRIM47-204ENST00000587339 SLC7A4O43246 635 aa19.96■□□□□ 0.79
TRIM47-204ENST00000587339 CRTAMO95727 393 aa19.96■□□□□ 0.79
TRIM47-204ENST00000587339 SLC1A2P43004 574 aa19.96■□□□□ 0.79
TRIM47-204ENST00000587339 PDE1CQ14123 709 aaPredicted RBP19.96■□□□□ 0.79
TRIM47-204ENST00000587339 C2CD4AQ8NCU7 369 aaPredicted RBP19.96■□□□□ 0.79
TRIM47-204ENST00000587339 OR6P1Q8NGX9 317 aa19.96■□□□□ 0.79
TRIM47-204ENST00000587339 LRRC8CQ8TDW0 803 aa19.96■□□□□ 0.79
TRIM47-204ENST00000587339 SPOCK2Q92563 424 aa19.96■□□□□ 0.79
TRIM47-204ENST00000587339 HDAC10Q969S8 669 aa19.96■□□□□ 0.79
TRIM47-204ENST00000587339 ISL2Q96A47 359 aa19.96■□□□□ 0.79
TRIM47-204ENST00000587339 MRPL38Q96DV4 380 aaKnown RBP19.96■□□□□ 0.79
TRIM47-204ENST00000587339 RFXAPO00287 272 aa19.96■□□□□ 0.79
TRIM47-204ENST00000587339 BUD23O43709 281 aaKnown RBP19.96■□□□□ 0.79
TRIM47-204ENST00000587339 DHRS4L1P0CG22 281 aa19.96■□□□□ 0.79
TRIM47-204ENST00000587339 PABPC1P11940 636 aaKnown RBP19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms