RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 ANAPC2Q9UJX6 822 aa8.68□□□□□ -1.02
SDF2-204ENST00000587338 PLAAQ9Y263 795 aa8.68□□□□□ -1.02
SDF2-204ENST00000587338 FCF1Q9Y324 198 aaKnown RBP8.68□□□□□ -1.02
SDF2-204ENST00000587338 SNX10Q9Y5X0 201 aa8.68□□□□□ -1.02
SDF2-204ENST00000587338 C16orf96A6NNT2 1141 aa8.67□□□□□ -1.02
SDF2-204ENST00000587338 STMND1H3BQB6 276 aa8.67□□□□□ -1.02
SDF2-204ENST00000587338 TEX33O43247 280 aa8.67□□□□□ -1.02
SDF2-204ENST00000587338 HSF2BPO75031 334 aa8.67□□□□□ -1.02
SDF2-204ENST00000587338 ZNF821O75541 412 aaPredicted RBP8.67□□□□□ -1.02
SDF2-204ENST00000587338 KRT5P13647 590 aa8.67□□□□□ -1.02
SDF2-204ENST00000587338 OR1E1P30953 314 aa8.67□□□□□ -1.02
SDF2-204ENST00000587338 GKP32189 559 aa8.67□□□□□ -1.02
SDF2-204ENST00000587338 CCR10P46092 362 aa8.67□□□□□ -1.02
SDF2-204ENST00000587338 FMO5P49326 533 aa8.67□□□□□ -1.02
SDF2-204ENST00000587338 SERPINH1P50454 418 aaKnown RBP8.67□□□□□ -1.02
SDF2-204ENST00000587338 ATP1A2P50993 1020 aa8.67□□□□□ -1.02
SDF2-204ENST00000587338 BLKP51451 505 aa8.67□□□□□ -1.02
SDF2-204ENST00000587338 HK3P52790 923 aa8.67□□□□□ -1.02
SDF2-204ENST00000587338 YPEL5P62699 121 aa8.67□□□□□ -1.02
SDF2-204ENST00000587338 ZFP36L1Q07352 338 aaKnown RBP8.67□□□□□ -1.02
SDF2-204ENST00000587338 PDCLQ13371 301 aa8.67□□□□□ -1.02
SDF2-204ENST00000587338 MAN2A1Q16706 1144 aa8.67□□□□□ -1.02
SDF2-204ENST00000587338 MAP9Q49MG5 647 aa8.67□□□□□ -1.02
SDF2-204ENST00000587338 VWA3BQ502W6 1294 aa8.67□□□□□ -1.02
SDF2-204ENST00000587338 CARD16Q5EG05 197 aa8.67□□□□□ -1.02
SDF2-204ENST00000587338 LRRC73Q5JTD7 316 aa8.67□□□□□ -1.02
SDF2-204ENST00000587338 FKBP15Q5T1M5 1219 aa8.67□□□□□ -1.02
SDF2-204ENST00000587338 TMEM164Q5U3C3 297 aa8.67□□□□□ -1.02
SDF2-204ENST00000587338 RETSATQ6NUM9 610 aa8.67□□□□□ -1.02
SDF2-204ENST00000587338 LVRNQ6Q4G3 990 aa8.67□□□□□ -1.02
SDF2-204ENST00000587338 TMEM110Q86TL2 294 aa8.67□□□□□ -1.02
SDF2-204ENST00000587338 SETD3Q86TU7 594 aaPredicted RBP8.67□□□□□ -1.02
SDF2-204ENST00000587338 GKN2Q86XP6 184 aa8.67□□□□□ -1.02
SDF2-204ENST00000587338 ARHGEF19Q8IW93 802 aa8.67□□□□□ -1.02
SDF2-204ENST00000587338 PCDH20Q8N6Y1 951 aaKnown RBP8.67□□□□□ -1.02
SDF2-204ENST00000587338 OR6C4Q8NGE1 309 aa8.67□□□□□ -1.02
SDF2-204ENST00000587338 C9orf43Q8TAL5 461 aaPredicted RBP8.67□□□□□ -1.02
SDF2-204ENST00000587338 ASB12Q8WXK4 309 aa8.67□□□□□ -1.02
SDF2-204ENST00000587338 TSACCQ96A04 125 aaPredicted RBP8.67□□□□□ -1.02
SDF2-204ENST00000587338 RAB7BQ96AH8 199 aa8.67□□□□□ -1.02
SDF2-204ENST00000587338 CENPTQ96BT3 561 aa8.67□□□□□ -1.02
SDF2-204ENST00000587338 TRIM44Q96DX7 344 aaPredicted RBP8.67□□□□□ -1.02
SDF2-204ENST00000587338 MRFAP1L1Q96HT8 127 aa8.67□□□□□ -1.02
SDF2-204ENST00000587338 C1QTNF7Q9BXJ2 289 aa8.67□□□□□ -1.02
SDF2-204ENST00000587338 EDEM3Q9BZQ6 932 aa8.67□□□□□ -1.02
SDF2-204ENST00000587338 CEP44Q9C0F1 390 aa8.67□□□□□ -1.02
SDF2-204ENST00000587338 METTL14Q9HCE5 456 aaKnown RBP8.67□□□□□ -1.02
SDF2-204ENST00000587338 ATP13A1Q9HD20 1204 aa8.67□□□□□ -1.02
SDF2-204ENST00000587338 MBNL1Q9NR56 388 aaKnown RBP8.67□□□□□ -1.02
SDF2-204ENST00000587338 KCNK4Q9NYG8 393 aa8.67□□□□□ -1.02
SDF2-204ENST00000587338 MPP6Q9NZW5 540 aa8.67□□□□□ -1.02
SDF2-204ENST00000587338 TUBD1Q9UJT1 453 aa8.67□□□□□ -1.02
SDF2-204ENST00000587338 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.67□□□□□ -1.02
SDF2-204ENST00000587338 RNF215Q9Y6U7 377 aa8.67□□□□□ -1.02
SDF2-204ENST00000587338 SPENQ96T58 3664 aaKnown RBP8.67□□□□□ -1.02
SDF2-204ENST00000587338 DOPEY1Q5JWR5 2465 aa8.66□□□□□ -1.02
SDF2-204ENST00000587338 A0A1B0GTH6 734 aa8.66□□□□□ -1.02
SDF2-204ENST00000587338 ENO4A6NNW6 628 aa8.66□□□□□ -1.02
SDF2-204ENST00000587338 KRIT1O00522 736 aa8.66□□□□□ -1.02
SDF2-204ENST00000587338 THAP12O43422 761 aa8.66□□□□□ -1.02
SDF2-204ENST00000587338 MED7O43513 233 aa8.66□□□□□ -1.02
SDF2-204ENST00000587338 MMP20O60882 483 aa8.66□□□□□ -1.02
SDF2-204ENST00000587338 RASGRP1O95267 797 aa8.66□□□□□ -1.02
SDF2-204ENST00000587338 UGT2B4P06133 528 aa8.66□□□□□ -1.02
SDF2-204ENST00000587338 CCL4P13236 92 aa8.66□□□□□ -1.02
SDF2-204ENST00000587338 LIFP15018 202 aa8.66□□□□□ -1.02
SDF2-204ENST00000587338 CDC25BP30305 580 aa8.66□□□□□ -1.02
SDF2-204ENST00000587338 MTA1Q13330 715 aa8.66□□□□□ -1.02
SDF2-204ENST00000587338 NR1I3Q14994 352 aa8.66□□□□□ -1.02
SDF2-204ENST00000587338 C16orf72Q14CZ0 275 aa8.66□□□□□ -1.02
SDF2-204ENST00000587338 IRF4Q15306 451 aa8.66□□□□□ -1.02
SDF2-204ENST00000587338 ALG11Q2TAA5 492 aa8.66□□□□□ -1.02
SDF2-204ENST00000587338 C5orf22Q49AR2 442 aa8.66□□□□□ -1.02
SDF2-204ENST00000587338 ZNF805Q5CZA5 627 aa8.66□□□□□ -1.02
SDF2-204ENST00000587338 TMPRSS9Q7Z410 1059 aa8.66□□□□□ -1.02
SDF2-204ENST00000587338 SPRED1Q7Z699 444 aa8.66□□□□□ -1.02
SDF2-204ENST00000587338 SLITRK4Q8IW52 837 aa8.66□□□□□ -1.02
SDF2-204ENST00000587338 IL22RA1Q8N6P7 574 aa8.66□□□□□ -1.02
SDF2-204ENST00000587338 CXorf40AQ8TE69 158 aa8.66□□□□□ -1.02
SDF2-204ENST00000587338 ARHGEF26Q96DR7 871 aa8.66□□□□□ -1.02
SDF2-204ENST00000587338 EPAS1Q99814 870 aa8.66□□□□□ -1.02
SDF2-204ENST00000587338 WRAP53Q9BUR4 548 aaKnown RBP8.66□□□□□ -1.02
SDF2-204ENST00000587338 TKTL2Q9H0I9 626 aa8.66□□□□□ -1.02
SDF2-204ENST00000587338 SEMA6CQ9H3T2 930 aa8.66□□□□□ -1.02
SDF2-204ENST00000587338 RTN4Q9NQC3 1192 aaKnown RBP8.66□□□□□ -1.02
SDF2-204ENST00000587338 PIGVQ9NUD9 493 aa8.66□□□□□ -1.02
SDF2-204ENST00000587338 AKAP7Q9P0M2 348 aaPredicted RBP8.66□□□□□ -1.02
SDF2-204ENST00000587338 HECAQ9UBI9 543 aaPredicted RBP8.66□□□□□ -1.02
SDF2-204ENST00000587338 PLEKHB1Q9UF11 243 aaPredicted RBP8.66□□□□□ -1.02
SDF2-204ENST00000587338 ACTL7AQ9Y615 435 aa8.66□□□□□ -1.02
SDF2-204ENST00000587338 SDK2Q58EX2 2172 aa8.66□□□□□ -1.02
SDF2-204ENST00000587338 LGALS16A8MUM7 142 aa8.65□□□□□ -1.02
SDF2-204ENST00000587338 B4DGG1 531 aa8.65□□□□□ -1.02
SDF2-204ENST00000587338 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.65□□□□□ -1.02
SDF2-204ENST00000587338 TOR1BO14657 336 aa8.65□□□□□ -1.02
SDF2-204ENST00000587338 ZMPSTE24O75844 475 aa8.65□□□□□ -1.02
SDF2-204ENST00000587338 TM7SF2O76062 418 aa8.65□□□□□ -1.02
SDF2-204ENST00000587338 GLI1P08151 1106 aa8.65□□□□□ -1.02
SDF2-204ENST00000587338 PRKAR1AP10644 381 aa8.65□□□□□ -1.02
SDF2-204ENST00000587338 GLB1P16278 677 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms