RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 C2CD4BA6NLJ0 364 aa12.01□□□□□ -0.49
BRCA1-225ENST00000586385 TOR1BO14657 336 aa12.01□□□□□ -0.49
BRCA1-225ENST00000586385 KDELR3O43731 214 aa12.01□□□□□ -0.49
BRCA1-225ENST00000586385 RAMP2O60895 175 aa12.01□□□□□ -0.49
BRCA1-225ENST00000586385 RPLP0P05388 317 aaKnown RBP12.01□□□□□ -0.49
BRCA1-225ENST00000586385 PLEKP08567 350 aaPredicted RBP12.01□□□□□ -0.49
BRCA1-225ENST00000586385 CHRNB2P17787 502 aa12.01□□□□□ -0.49
BRCA1-225ENST00000586385 CCKBRP32239 447 aa12.01□□□□□ -0.49
BRCA1-225ENST00000586385 ETFBP38117 255 aa12.01□□□□□ -0.49
BRCA1-225ENST00000586385 ETV5P41161 510 aa12.01□□□□□ -0.49
BRCA1-225ENST00000586385 MTIF2P46199 727 aaKnown RBP12.01□□□□□ -0.49
BRCA1-225ENST00000586385 HDAC4P56524 1084 aa12.01□□□□□ -0.49
BRCA1-225ENST00000586385 BPIFB4P59827 614 aa12.01□□□□□ -0.49
BRCA1-225ENST00000586385 ZFP36L1Q07352 338 aaKnown RBP12.01□□□□□ -0.49
BRCA1-225ENST00000586385 PTP4A2Q12974 167 aa12.01□□□□□ -0.49
BRCA1-225ENST00000586385 RAPGEF1Q13905 1077 aa12.01□□□□□ -0.49
BRCA1-225ENST00000586385 NFATC4Q14934 902 aa12.01□□□□□ -0.49
BRCA1-225ENST00000586385 POLD3Q15054 466 aaPredicted RBP12.01□□□□□ -0.49
BRCA1-225ENST00000586385 MAN2A1Q16706 1144 aa12.01□□□□□ -0.49
BRCA1-225ENST00000586385 CDO1Q16878 200 aa12.01□□□□□ -0.49
BRCA1-225ENST00000586385 RWDD4Q6NW29 188 aaKnown RBP12.01□□□□□ -0.49
BRCA1-225ENST00000586385 ESRP1Q6NXG1 681 aaKnown RBP12.01□□□□□ -0.49
BRCA1-225ENST00000586385 LVRNQ6Q4G3 990 aa12.01□□□□□ -0.49
BRCA1-225ENST00000586385 PRICKLE2Q7Z3G6 844 aa12.01□□□□□ -0.49
BRCA1-225ENST00000586385 ZSWIM9Q86XI8 627 aa12.01□□□□□ -0.49
BRCA1-225ENST00000586385 HID1Q8IV36 788 aa12.01□□□□□ -0.49
BRCA1-225ENST00000586385 PYROXD2Q8N2H3 581 aa12.01□□□□□ -0.49
BRCA1-225ENST00000586385 FSTL5Q8N475 847 aaPredicted RBP12.01□□□□□ -0.49
BRCA1-225ENST00000586385 GPR156Q8NFN8 814 aa12.01□□□□□ -0.49
BRCA1-225ENST00000586385 RXFP2Q8WXD0 754 aa12.01□□□□□ -0.49
BRCA1-225ENST00000586385 CENPIQ92674 756 aaPredicted RBP12.01□□□□□ -0.49
BRCA1-225ENST00000586385 EXTL1Q92935 676 aa12.01□□□□□ -0.49
BRCA1-225ENST00000586385 ARHGEF26Q96DR7 871 aa12.01□□□□□ -0.49
BRCA1-225ENST00000586385 PDXPQ96GD0 296 aa12.01□□□□□ -0.49
BRCA1-225ENST00000586385 GFM1Q96RP9 751 aaKnown RBP12.01□□□□□ -0.49
BRCA1-225ENST00000586385 CPEB1Q9BZB8 566 aaKnown RBP12.01□□□□□ -0.49
BRCA1-225ENST00000586385 EDEM3Q9BZQ6 932 aa12.01□□□□□ -0.49
BRCA1-225ENST00000586385 TTYH3Q9C0H2 523 aa12.01□□□□□ -0.49
BRCA1-225ENST00000586385 NDST4Q9H3R1 872 aa12.01□□□□□ -0.49
BRCA1-225ENST00000586385 LRRN3Q9H3W5 708 aa12.01□□□□□ -0.49
BRCA1-225ENST00000586385 STARD5Q9NSY2 213 aa12.01□□□□□ -0.49
BRCA1-225ENST00000586385 TMEM51Q9NW97 253 aa12.01□□□□□ -0.49
BRCA1-225ENST00000586385 GPR34Q9UPC5 381 aa12.01□□□□□ -0.49
BRCA1-225ENST00000586385 MFHAS1Q9Y4C4 1052 aa12.01□□□□□ -0.49
BRCA1-225ENST00000586385 TLN1Q9Y490 2541 aaKnown RBP12□□□□□ -0.49
BRCA1-225ENST00000586385 TSPAN11A1L157 253 aa12□□□□□ -0.49
BRCA1-225ENST00000586385 F8VZ95 297 aa12□□□□□ -0.49
BRCA1-225ENST00000586385 NVLO15381 856 aaKnown RBP12□□□□□ -0.49
BRCA1-225ENST00000586385 PIGNO95427 931 aa12□□□□□ -0.49
BRCA1-225ENST00000586385 CYP1A1P04798 512 aaPredicted RBP12□□□□□ -0.49
BRCA1-225ENST00000586385 ITIH1P19827 911 aa12□□□□□ -0.49
BRCA1-225ENST00000586385 MMP8P22894 467 aa12□□□□□ -0.49
BRCA1-225ENST00000586385 CSRP3P50461 194 aa12□□□□□ -0.49
BRCA1-225ENST00000586385 PEX5P50542 639 aa12□□□□□ -0.49
BRCA1-225ENST00000586385 INHBCP55103 352 aa12□□□□□ -0.49
BRCA1-225ENST00000586385 GEMIN4P57678 1058 aaKnown RBP12□□□□□ -0.49
BRCA1-225ENST00000586385 SRP54P61011 504 aaKnown RBP12□□□□□ -0.49
BRCA1-225ENST00000586385 ELOCQ15369 112 aa12□□□□□ -0.49
BRCA1-225ENST00000586385 CYTH1Q15438 398 aa12□□□□□ -0.49
BRCA1-225ENST00000586385 CAMK4Q16566 473 aa12□□□□□ -0.49
BRCA1-225ENST00000586385 VWA3BQ502W6 1294 aa12□□□□□ -0.49
BRCA1-225ENST00000586385 VASH2Q86V25 355 aa12□□□□□ -0.49
BRCA1-225ENST00000586385 CXorf40AQ8TE69 158 aa12□□□□□ -0.49
BRCA1-225ENST00000586385 HTR3CQ8WXA8 447 aa12□□□□□ -0.49
BRCA1-225ENST00000586385 TBC1D31Q96DN5 1066 aa12□□□□□ -0.49
BRCA1-225ENST00000586385 SGF29Q96ES7 293 aa12□□□□□ -0.49
BRCA1-225ENST00000586385 HMCESQ96FZ2 354 aa12□□□□□ -0.49
BRCA1-225ENST00000586385 GDAP1L1Q96MZ0 367 aa12□□□□□ -0.49
BRCA1-225ENST00000586385 APOOQ9BUR5 198 aa12□□□□□ -0.49
BRCA1-225ENST00000586385 PDCL3Q9H2J4 239 aa12□□□□□ -0.49
BRCA1-225ENST00000586385 RETREG1Q9H6L5 497 aa12□□□□□ -0.49
BRCA1-225ENST00000586385 PCDH12Q9NPG4 1184 aa12□□□□□ -0.49
BRCA1-225ENST00000586385 EIF2AK3Q9NZJ5 1116 aaKnown RBP12□□□□□ -0.49
BRCA1-225ENST00000586385 FOXJ2Q9P0K8 574 aa12□□□□□ -0.49
BRCA1-225ENST00000586385 PISDQ9UG56 409 aa12□□□□□ -0.49
BRCA1-225ENST00000586385 LOXL2Q9Y4K0 774 aa12□□□□□ -0.49
BRCA1-225ENST00000586385 OR1A2Q9Y585 309 aa12□□□□□ -0.49
BRCA1-225ENST00000586385 BOD1L1Q8NFC6 3051 aa12□□□□□ -0.49
BRCA1-225ENST00000586385 PRAMEF33A0A0G2JMD5 474 aa11.99□□□□□ -0.49
BRCA1-225ENST00000586385 AGRPO00253 132 aa11.99□□□□□ -0.49
BRCA1-225ENST00000586385 BUB1O43683 1085 aa11.99□□□□□ -0.49
BRCA1-225ENST00000586385 BUB1BO60566 1050 aaPredicted RBP11.99□□□□□ -0.49
BRCA1-225ENST00000586385 PRAMEF10O60809 474 aa11.99□□□□□ -0.49
BRCA1-225ENST00000586385 RASGRP1O95267 797 aa11.99□□□□□ -0.49
BRCA1-225ENST00000586385 PRKCGP05129 697 aa11.99□□□□□ -0.49
BRCA1-225ENST00000586385 ALPIP09923 528 aa11.99□□□□□ -0.49
BRCA1-225ENST00000586385 FAM87AP0C7U9 286 aa11.99□□□□□ -0.49
BRCA1-225ENST00000586385 LIPCP11150 499 aa11.99□□□□□ -0.49
BRCA1-225ENST00000586385 UCHL3P15374 230 aa11.99□□□□□ -0.49
BRCA1-225ENST00000586385 GM2AP17900 193 aa11.99□□□□□ -0.49
BRCA1-225ENST00000586385 PTPN9P43378 593 aa11.99□□□□□ -0.49
BRCA1-225ENST00000586385 FMO1Q01740 532 aa11.99□□□□□ -0.49
BRCA1-225ENST00000586385 SRSF1Q07955 248 aaKnown RBP eCLIP11.99□□□□□ -0.49
BRCA1-225ENST00000586385 EIF3IQ13347 325 aaKnown RBP11.99□□□□□ -0.49
BRCA1-225ENST00000586385 INPP5AQ14642 412 aa11.99□□□□□ -0.49
BRCA1-225ENST00000586385 LRRC14Q15048 493 aa11.99□□□□□ -0.49
BRCA1-225ENST00000586385 HSP90AA4PQ58FG1 418 aa11.99□□□□□ -0.49
BRCA1-225ENST00000586385 OGFOD3Q6PK18 319 aa11.99□□□□□ -0.49
BRCA1-225ENST00000586385 ENPP7Q6UWV6 458 aa11.99□□□□□ -0.49
BRCA1-225ENST00000586385 RD3Q7Z3Z2 195 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms