RNA–Protein interactions for RNA: ENST00000585371.1

CHAF1A-202, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 5

Gene CHAF1A, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-202ENST00000585371 RAD51Q06609 339 aa13.45□□□□□ -0.26
CHAF1A-202ENST00000585371 GRM3Q14832 879 aa13.45□□□□□ -0.26
CHAF1A-202ENST00000585371 SLC14A2Q15849 920 aa13.45□□□□□ -0.26
CHAF1A-202ENST00000585371 TTC31Q49AM3 519 aaPredicted RBP13.45□□□□□ -0.26
CHAF1A-202ENST00000585371 USP39Q53GS9 565 aaKnown RBP13.45□□□□□ -0.26
CHAF1A-202ENST00000585371 PPM1JQ5JR12 505 aa13.45□□□□□ -0.26
CHAF1A-202ENST00000585371 ANKRD20A2Q5SQ80 823 aa13.45□□□□□ -0.26
CHAF1A-202ENST00000585371 ANKRD20A1Q5TYW2 823 aa13.45□□□□□ -0.26
CHAF1A-202ENST00000585371 ANKRD20A3Q5VUR7 823 aa13.45□□□□□ -0.26
CHAF1A-202ENST00000585371 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.45□□□□□ -0.26
CHAF1A-202ENST00000585371 ERN2Q76MJ5 926 aaKnown RBP13.45□□□□□ -0.26
CHAF1A-202ENST00000585371 KBTBD6Q86V97 674 aa13.45□□□□□ -0.26
CHAF1A-202ENST00000585371 KLHDC8BQ8IXV7 354 aa13.45□□□□□ -0.26
CHAF1A-202ENST00000585371 C12orf50Q8NA57 414 aaPredicted RBP13.45□□□□□ -0.26
CHAF1A-202ENST00000585371 GLIS1Q8NBF1 620 aa13.45□□□□□ -0.26
CHAF1A-202ENST00000585371 HCAR2Q8TDS4 363 aa13.45□□□□□ -0.26
CHAF1A-202ENST00000585371 MAIP1Q8WWC4 291 aa13.45□□□□□ -0.26
CHAF1A-202ENST00000585371 TOE1Q96GM8 510 aaKnown RBP13.45□□□□□ -0.26
CHAF1A-202ENST00000585371 ZNF641Q96N77 438 aaPredicted RBP13.45□□□□□ -0.26
CHAF1A-202ENST00000585371 SPATA13Q96N96 652 aa13.45□□□□□ -0.26
CHAF1A-202ENST00000585371 FCRL5Q96RD9 977 aa13.45□□□□□ -0.26
CHAF1A-202ENST00000585371 DUSP15Q9H1R2 295 aaPredicted RBP13.45□□□□□ -0.26
CHAF1A-202ENST00000585371 SLC25A51Q9H1U9 297 aa13.45□□□□□ -0.26
CHAF1A-202ENST00000585371 DRG1Q9Y295 367 aaKnown RBP13.45□□□□□ -0.26
CHAF1A-202ENST00000585371 PCDHGC4Q9Y5F7 938 aa13.45□□□□□ -0.26
CHAF1A-202ENST00000585371 MYLKQ15746 1914 aa13.45□□□□□ -0.26
CHAF1A-202ENST00000585371 SCN8AQ9UQD0 1980 aa13.44□□□□□ -0.26
CHAF1A-202ENST00000585371 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.44□□□□□ -0.26
CHAF1A-202ENST00000585371 SLC7A4O43246 635 aa13.44□□□□□ -0.26
CHAF1A-202ENST00000585371 PLRG1O43660 514 aaKnown RBP13.44□□□□□ -0.26
CHAF1A-202ENST00000585371 SOCS5O75159 536 aa13.44□□□□□ -0.26
CHAF1A-202ENST00000585371 RNASEH2AO75792 299 aaKnown RBP13.44□□□□□ -0.26
CHAF1A-202ENST00000585371 RPP40O75818 363 aaKnown RBP13.44□□□□□ -0.26
CHAF1A-202ENST00000585371 ITGAVP06756 1048 aa13.44□□□□□ -0.26
CHAF1A-202ENST00000585371 PDHA1P08559 390 aa13.44□□□□□ -0.26
CHAF1A-202ENST00000585371 ADRB3P13945 408 aa13.44□□□□□ -0.26
CHAF1A-202ENST00000585371 ITIH2P19823 946 aa13.44□□□□□ -0.26
CHAF1A-202ENST00000585371 NFKB1P19838 968 aa13.44□□□□□ -0.26
CHAF1A-202ENST00000585371 CES1P23141 567 aa13.44□□□□□ -0.26
CHAF1A-202ENST00000585371 CD6P30203 668 aa13.44□□□□□ -0.26
CHAF1A-202ENST00000585371 CASQ1P31415 396 aa13.44□□□□□ -0.26
CHAF1A-202ENST00000585371 MAPK8P45983 427 aa13.44□□□□□ -0.26
CHAF1A-202ENST00000585371 KCNJ1P48048 391 aa13.44□□□□□ -0.26
CHAF1A-202ENST00000585371 ADPRHP54922 357 aa13.44□□□□□ -0.26
CHAF1A-202ENST00000585371 BCL2L1Q07817 233 aa13.44□□□□□ -0.26
CHAF1A-202ENST00000585371 ITKQ08881 620 aa13.44□□□□□ -0.26
CHAF1A-202ENST00000585371 SNX1Q13596 522 aa13.44□□□□□ -0.26
CHAF1A-202ENST00000585371 BYSLQ13895 437 aaKnown RBP13.44□□□□□ -0.26
CHAF1A-202ENST00000585371 PLK5Q496M5 336 aa13.44□□□□□ -0.26
CHAF1A-202ENST00000585371 AASDHQ4L235 1098 aaPredicted RBP13.44□□□□□ -0.26
CHAF1A-202ENST00000585371 TTC27Q6P3X3 843 aa13.44□□□□□ -0.26
CHAF1A-202ENST00000585371 KDELC1Q6UW63 502 aa13.44□□□□□ -0.26
CHAF1A-202ENST00000585371 PID1Q7Z2X4 250 aa13.44□□□□□ -0.26
CHAF1A-202ENST00000585371 FAM124AQ86V42 546 aa13.44□□□□□ -0.26
CHAF1A-202ENST00000585371 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.44□□□□□ -0.26
CHAF1A-202ENST00000585371 FAM71DQ8N9W8 422 aa13.44□□□□□ -0.26
CHAF1A-202ENST00000585371 SPATA22Q8NHS9 363 aa13.44□□□□□ -0.26
CHAF1A-202ENST00000585371 CCDC110Q8TBZ0 833 aa13.44□□□□□ -0.26
CHAF1A-202ENST00000585371 OXNAD1Q96HP4 312 aaPredicted RBP13.44□□□□□ -0.26
CHAF1A-202ENST00000585371 ZC3H10Q96K80 434 aaKnown RBP13.44□□□□□ -0.26
CHAF1A-202ENST00000585371 TRIB3Q96RU7 358 aa13.44□□□□□ -0.26
CHAF1A-202ENST00000585371 RBM15Q96T37 977 aaKnown RBP eCLIP13.44□□□□□ -0.263e-6■■■■□ 21.2
CHAF1A-202ENST00000585371 OMDQ99983 421 aa13.44□□□□□ -0.26
CHAF1A-202ENST00000585371 AP1M1Q9BXS5 423 aa13.44□□□□□ -0.26
CHAF1A-202ENST00000585371 ATP13A3Q9H7F0 1226 aa13.44□□□□□ -0.26
CHAF1A-202ENST00000585371 KLHL8Q9P2G9 620 aaPredicted RBP13.44□□□□□ -0.26
CHAF1A-202ENST00000585371 TRHDEQ9UKU6 1024 aa13.44□□□□□ -0.26
CHAF1A-202ENST00000585371 PCDHGA5Q9Y5G8 931 aa13.44□□□□□ -0.26
CHAF1A-202ENST00000585371 TP53BP1Q12888 1972 aaPredicted RBP13.43□□□□□ -0.26
CHAF1A-202ENST00000585371 SDK1Q7Z5N4 2213 aa13.43□□□□□ -0.26
CHAF1A-202ENST00000585371 SPTBN2O15020 2390 aa13.43□□□□□ -0.26
CHAF1A-202ENST00000585371 CFAP69A5D8W1 941 aa13.43□□□□□ -0.26
CHAF1A-202ENST00000585371 AREL1O15033 823 aa13.43□□□□□ -0.26
CHAF1A-202ENST00000585371 GCATO75600 419 aa13.43□□□□□ -0.26
CHAF1A-202ENST00000585371 EPN2O95208 641 aa13.43□□□□□ -0.26
CHAF1A-202ENST00000585371 PGLSO95336 258 aa13.43□□□□□ -0.26
CHAF1A-202ENST00000585371 MT-CYBP00156 380 aaPredicted RBP13.43□□□□□ -0.26
CHAF1A-202ENST00000585371 ZNF806P0C7X5 589 aa13.43□□□□□ -0.26
CHAF1A-202ENST00000585371 SERPINA4P29622 427 aa13.43□□□□□ -0.26
CHAF1A-202ENST00000585371 OXTRP30559 389 aa13.43□□□□□ -0.26
CHAF1A-202ENST00000585371 CD86P42081 329 aa13.43□□□□□ -0.26
CHAF1A-202ENST00000585371 NEK3P51956 506 aa13.43□□□□□ -0.26
CHAF1A-202ENST00000585371 PMS2CLQ68D20 193 aa13.43□□□□□ -0.26
CHAF1A-202ENST00000585371 PRUNE1Q86TP1 453 aa13.43□□□□□ -0.26
CHAF1A-202ENST00000585371 ZSCAN30Q86W11 494 aa13.43□□□□□ -0.26
CHAF1A-202ENST00000585371 SLC41A1Q8IVJ1 513 aa13.43□□□□□ -0.26
CHAF1A-202ENST00000585371 PIH1D2Q8WWB5 315 aa13.43□□□□□ -0.26
CHAF1A-202ENST00000585371 PPP1R16AQ96I34 528 aa13.43□□□□□ -0.26
CHAF1A-202ENST00000585371 TDRD1Q9BXT4 1180 aaKnown RBP13.43□□□□□ -0.26
CHAF1A-202ENST00000585371 BTBD1Q9H0C5 482 aa13.43□□□□□ -0.26
CHAF1A-202ENST00000585371 GBA3Q9H227 469 aa13.43□□□□□ -0.26
CHAF1A-202ENST00000585371 ARRDC1-AS1Q9H2J1 176 aa13.43□□□□□ -0.26
CHAF1A-202ENST00000585371 SGK2Q9HBY8 427 aa13.43□□□□□ -0.26
CHAF1A-202ENST00000585371 PPIL1Q9Y3C6 166 aa13.43□□□□□ -0.26
CHAF1A-202ENST00000585371 TTLL3Q9Y4R7 772 aa13.43□□□□□ -0.26
CHAF1A-202ENST00000585371 RAI2Q9Y5P3 530 aa13.43□□□□□ -0.26
CHAF1A-202ENST00000585371 FADS3Q9Y5Q0 445 aa13.43□□□□□ -0.26
CHAF1A-202ENST00000585371 GON4LQ3T8J9 2241 aa13.42□□□□□ -0.26
CHAF1A-202ENST00000585371 UPK3BL1B0FP48 263 aa13.42□□□□□ -0.26
CHAF1A-202ENST00000585371 UPK3BL2E5RIL1 263 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms