RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 DHX9Q08211 1270 aaKnown RBP16.27■□□□□ 0.2
SS18-226ENST00000585241 PDIA2Q13087 525 aaKnown RBP16.27■□□□□ 0.2
SS18-226ENST00000585241 CAMK2GQ13555 558 aaPredicted RBP16.27■□□□□ 0.2
SS18-226ENST00000585241 SIRPB2Q5JXA9 342 aa16.27■□□□□ 0.2
SS18-226ENST00000585241 SPDYCQ5MJ68 293 aa16.27■□□□□ 0.2
SS18-226ENST00000585241 ARMC12Q5T9G4 340 aa16.27■□□□□ 0.2
SS18-226ENST00000585241 ZNF852Q6ZMS4 543 aa16.27■□□□□ 0.2
SS18-226ENST00000585241 CAMK1DQ8IU85 385 aa16.27■□□□□ 0.2
SS18-226ENST00000585241 CHPFQ8IZ52 775 aa16.27■□□□□ 0.2
SS18-226ENST00000585241 RYBPQ8N488 228 aaPredicted RBP16.27■□□□□ 0.2
SS18-226ENST00000585241 ZNF366Q8N895 744 aa16.27■□□□□ 0.2
SS18-226ENST00000585241 IL17RCQ8NAC3 791 aa16.27■□□□□ 0.2
SS18-226ENST00000585241 TMIEQ8NEW7 156 aa16.27■□□□□ 0.2
SS18-226ENST00000585241 HCAR2Q8TDS4 363 aa16.27■□□□□ 0.2
SS18-226ENST00000585241 PIH1D2Q8WWB5 315 aa16.27■□□□□ 0.2
SS18-226ENST00000585241 OR8D1Q8WZ84 308 aa16.27■□□□□ 0.2
SS18-226ENST00000585241 SUV39H2Q9H5I1 410 aa16.27■□□□□ 0.2
SS18-226ENST00000585241 ZDHHC6Q9H6R6 413 aa16.27■□□□□ 0.2
SS18-226ENST00000585241 PRSS16Q9NQE7 514 aa16.27■□□□□ 0.2
SS18-226ENST00000585241 DKK3Q9UBP4 350 aa16.27■□□□□ 0.2
SS18-226ENST00000585241 IL36AQ9UHA7 158 aa16.27■□□□□ 0.2
SS18-226ENST00000585241 CHKBQ9Y259 395 aa16.27■□□□□ 0.2
SS18-226ENST00000585241 PPIL1Q9Y3C6 166 aa16.27■□□□□ 0.2
SS18-226ENST00000585241 TEX264Q9Y6I9 313 aa16.27■□□□□ 0.2
SS18-226ENST00000585241 KRBA1A5PL33 1030 aa16.26■□□□□ 0.19
SS18-226ENST00000585241 SDR42E2A6NKP2 422 aa16.26■□□□□ 0.19
SS18-226ENST00000585241 BNIP3LO60238 219 aa16.26■□□□□ 0.19
SS18-226ENST00000585241 PRNPP04156 253 aa16.26■□□□□ 0.19
SS18-226ENST00000585241 PDHA1P08559 390 aa16.26■□□□□ 0.19
SS18-226ENST00000585241 TIE1P35590 1138 aa16.26■□□□□ 0.19
SS18-226ENST00000585241 TNNT3P45378 269 aaPredicted RBP16.26■□□□□ 0.19
SS18-226ENST00000585241 GRIA4P48058 902 aa16.26■□□□□ 0.19
SS18-226ENST00000585241 SEC13P55735 322 aa16.26■□□□□ 0.19
SS18-226ENST00000585241 QPCTQ16769 361 aa16.26■□□□□ 0.19
SS18-226ENST00000585241 BBS9Q3SYG4 887 aa16.26■□□□□ 0.19
SS18-226ENST00000585241 CCDC38Q502W7 563 aa16.26■□□□□ 0.19
SS18-226ENST00000585241 GDPD4Q6W3E5 623 aa16.26■□□□□ 0.19
SS18-226ENST00000585241 GJD3Q8N144 294 aa16.26■□□□□ 0.19
SS18-226ENST00000585241 STK40Q8N2I9 435 aa16.26■□□□□ 0.19
SS18-226ENST00000585241 SYNPOQ8N3V7 929 aa16.26■□□□□ 0.19
SS18-226ENST00000585241 DNAAF3Q8N9W5 541 aa16.26■□□□□ 0.19
SS18-226ENST00000585241 PTCD2Q8WV60 388 aaKnown RBP16.26■□□□□ 0.19
SS18-226ENST00000585241 SHDQ96IW2 340 aa16.26■□□□□ 0.19
SS18-226ENST00000585241 RANBP9Q96S59 729 aa16.26■□□□□ 0.19
SS18-226ENST00000585241 FAM129BQ96TA1 746 aa16.26■□□□□ 0.19
SS18-226ENST00000585241 ADGRE3Q9BY15 652 aa16.26■□□□□ 0.19
SS18-226ENST00000585241 IL22Q9GZX6 179 aa16.26■□□□□ 0.19
SS18-226ENST00000585241 FBRSQ9HAH7 460 aa16.26■□□□□ 0.19
SS18-226ENST00000585241 CD248Q9HCU0 757 aa16.26■□□□□ 0.19
SS18-226ENST00000585241 SAYSD1Q9NPB0 183 aa16.26■□□□□ 0.19
SS18-226ENST00000585241 BFARQ9NZS9 450 aa16.26■□□□□ 0.19
SS18-226ENST00000585241 PPM1HQ9ULR3 514 aa16.26■□□□□ 0.19
SS18-226ENST00000585241 CA14Q9ULX7 337 aa16.26■□□□□ 0.19
SS18-226ENST00000585241 COL6A3P12111 3177 aa16.26■□□□□ 0.19
SS18-226ENST00000585241 ANKRD66B4E2M5 251 aa16.25■□□□□ 0.19
SS18-226ENST00000585241 ADAM23O75077 832 aa16.25■□□□□ 0.19
SS18-226ENST00000585241 BANF1O75531 89 aa16.25■□□□□ 0.19
SS18-226ENST00000585241 LEFTY1O75610 366 aa16.25■□□□□ 0.19
SS18-226ENST00000585241 UGT2B4P06133 528 aa16.25■□□□□ 0.19
SS18-226ENST00000585241 EPHX1P07099 455 aa16.25■□□□□ 0.19
SS18-226ENST00000585241 CHRNB1P11230 501 aa16.25■□□□□ 0.19
SS18-226ENST00000585241 TSHRP16473 764 aa16.25■□□□□ 0.19
SS18-226ENST00000585241 MGAT1P26572 445 aa16.25■□□□□ 0.19
SS18-226ENST00000585241 MAGEA4P43358 317 aa16.25■□□□□ 0.19
SS18-226ENST00000585241 SESN2P58004 480 aaPredicted RBP16.25■□□□□ 0.19
SS18-226ENST00000585241 GALNT3Q14435 633 aa16.25■□□□□ 0.19
SS18-226ENST00000585241 FASTKD3Q14CZ7 662 aaKnown RBP16.25■□□□□ 0.19
SS18-226ENST00000585241 BRAT1Q6PJG6 821 aa16.25■□□□□ 0.19
SS18-226ENST00000585241 TRMT10CQ7L0Y3 403 aaKnown RBP16.25■□□□□ 0.19
SS18-226ENST00000585241 DSG4Q86SJ6 1040 aa16.25■□□□□ 0.19
SS18-226ENST00000585241 CCDC25Q86WR0 208 aa16.25■□□□□ 0.19
SS18-226ENST00000585241 ZSWIM9Q86XI8 627 aa16.25■□□□□ 0.19
SS18-226ENST00000585241 CCNJLQ8IV13 435 aa16.25■□□□□ 0.19
SS18-226ENST00000585241 ZBED8Q8IZ13 594 aa16.25■□□□□ 0.19
SS18-226ENST00000585241 MPP5Q8N3R9 675 aa16.25■□□□□ 0.19
SS18-226ENST00000585241 LYSMD1Q96S90 227 aa16.25■□□□□ 0.19
SS18-226ENST00000585241 EBNA1BP2Q99848 306 aaKnown RBP16.25■□□□□ 0.19
SS18-226ENST00000585241 NAT9Q9BTE0 207 aa16.25■□□□□ 0.19
SS18-226ENST00000585241 CDC42EP4Q9H3Q1 356 aaKnown RBP16.25■□□□□ 0.19
SS18-226ENST00000585241 MRM3Q9HC36 420 aaKnown RBP16.25■□□□□ 0.19
SS18-226ENST00000585241 LTB4R2Q9NPC1 389 aa16.25■□□□□ 0.19
SS18-226ENST00000585241 ZDHHC4Q9NPG8 344 aa16.25■□□□□ 0.19
SS18-226ENST00000585241 PIH1D1Q9NWS0 290 aaKnown RBP16.25■□□□□ 0.19
SS18-226ENST00000585241 SYBUQ9NX95 663 aa16.25■□□□□ 0.19
SS18-226ENST00000585241 MRPS17Q9Y2R5 130 aaKnown RBP16.25■□□□□ 0.19
SS18-226ENST00000585241 PCDHB9Q9Y5E1 797 aa16.25■□□□□ 0.19
SS18-226ENST00000585241 RNF40O75150 1001 aa16.24■□□□□ 0.19
SS18-226ENST00000585241 CPP00450 1065 aa16.24■□□□□ 0.19
SS18-226ENST00000585241 TARSP26639 723 aaKnown RBP16.24■□□□□ 0.19
SS18-226ENST00000585241 ELK3P41970 407 aa16.24■□□□□ 0.19
SS18-226ENST00000585241 PMS2P54278 862 aa16.24■□□□□ 0.19
SS18-226ENST00000585241 ZNF805Q5CZA5 627 aa16.24■□□□□ 0.19
SS18-226ENST00000585241 ARSIQ5FYB1 569 aa16.24■□□□□ 0.19
SS18-226ENST00000585241 PCID2Q5JVF3 399 aa16.24■□□□□ 0.19
SS18-226ENST00000585241 CERCAMQ5T4B2 595 aa16.24■□□□□ 0.19
SS18-226ENST00000585241 KDELC2Q7Z4H8 507 aa16.24■□□□□ 0.19
SS18-226ENST00000585241 IGDCC3Q8IVU1 814 aa16.24■□□□□ 0.19
SS18-226ENST00000585241 SLC25A41Q8N5S1 370 aa16.24■□□□□ 0.19
SS18-226ENST00000585241 FBXO36Q8NEA4 188 aa16.24■□□□□ 0.19
SS18-226ENST00000585241 LPCAT1Q8NF37 534 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms