RNA–Protein interactions for RNA: ENST00000584754.1

PPP4R1-229, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-229ENST00000584754 CLEC3BP05452 202 aa3.88□□□□□ -1.79
PPP4R1-229ENST00000584754 SNHG28P0DPA3 235 aa3.88□□□□□ -1.79
PPP4R1-229ENST00000584754 CTSAP10619 480 aa3.88□□□□□ -1.79
PPP4R1-229ENST00000584754 ACADMP11310 421 aa3.88□□□□□ -1.79
PPP4R1-229ENST00000584754 PCNAP12004 261 aa3.88□□□□□ -1.79
PPP4R1-229ENST00000584754 ST6GAL1P15907 406 aa3.88□□□□□ -1.79
PPP4R1-229ENST00000584754 YWHAQP27348 245 aa3.88□□□□□ -1.79
PPP4R1-229ENST00000584754 MTNR1AP48039 350 aa3.88□□□□□ -1.79
PPP4R1-229ENST00000584754 DCAF7P61962 342 aa3.88□□□□□ -1.79
PPP4R1-229ENST00000584754 MTA1Q13330 715 aa3.88□□□□□ -1.79
PPP4R1-229ENST00000584754 EIF4A2Q14240 407 aaKnown RBP3.88□□□□□ -1.79
PPP4R1-229ENST00000584754 TTC39AQ5SRH9 613 aa3.88□□□□□ -1.79
PPP4R1-229ENST00000584754 FAM69AQ5T7M9 428 aa3.88□□□□□ -1.79
PPP4R1-229ENST00000584754 SLC9C2Q5TAH2 1124 aa3.88□□□□□ -1.79
PPP4R1-229ENST00000584754 SLC22A25Q6T423 547 aa3.88□□□□□ -1.79
PPP4R1-229ENST00000584754 KLHL24Q6TFL4 600 aa3.88□□□□□ -1.79
PPP4R1-229ENST00000584754 KIAA1324Q6UXG2 1013 aaKnown RBP3.88□□□□□ -1.79
PPP4R1-229ENST00000584754 ZNF793Q6ZN11 406 aa3.88□□□□□ -1.79
PPP4R1-229ENST00000584754 MDGA2Q7Z553 956 aa3.88□□□□□ -1.79
PPP4R1-229ENST00000584754 CPLX4Q7Z7G2 160 aa3.88□□□□□ -1.79
PPP4R1-229ENST00000584754 RHPN2Q8IUC4 686 aa3.88□□□□□ -1.79
PPP4R1-229ENST00000584754 ADSSL1Q8N142 457 aa3.88□□□□□ -1.79
PPP4R1-229ENST00000584754 VPS52Q8N1B4 723 aa3.88□□□□□ -1.79
PPP4R1-229ENST00000584754 HDAC7Q8WUI4 952 aa3.88□□□□□ -1.79
PPP4R1-229ENST00000584754 POMGNT1Q8WZA1 660 aa3.88□□□□□ -1.79
PPP4R1-229ENST00000584754 HSPH1Q92598 858 aa3.88□□□□□ -1.79
PPP4R1-229ENST00000584754 FAM149B1Q96BN6 582 aa3.88□□□□□ -1.79
PPP4R1-229ENST00000584754 EYA3Q99504 573 aa3.88□□□□□ -1.79
PPP4R1-229ENST00000584754 TUBB6Q9BUF5 446 aa3.88□□□□□ -1.79
PPP4R1-229ENST00000584754 PHF7Q9BWX1 381 aaPredicted RBP3.88□□□□□ -1.79
PPP4R1-229ENST00000584754 HDHD5Q9BXW7 423 aa3.88□□□□□ -1.79
PPP4R1-229ENST00000584754 CTDSP1Q9GZU7 261 aa3.88□□□□□ -1.79
PPP4R1-229ENST00000584754 PLEKHA5Q9HAU0 1116 aa3.88□□□□□ -1.79
PPP4R1-229ENST00000584754 PAPOLBQ9NRJ5 636 aaKnown RBP3.88□□□□□ -1.79
PPP4R1-229ENST00000584754 TMEM248Q9NWD8 314 aa3.88□□□□□ -1.79
PPP4R1-229ENST00000584754 GRHL1Q9NZI5 618 aa3.88□□□□□ -1.79
PPP4R1-229ENST00000584754 SLC4A4Q9Y6R1 1079 aa3.88□□□□□ -1.79
PPP4R1-229ENST00000584754 RGPD8O14715 1765 aaPredicted RBP3.88□□□□□ -1.79
PPP4R1-229ENST00000584754 CDC42BPGQ6DT37 1551 aa3.88□□□□□ -1.79
PPP4R1-229ENST00000584754 NUP188Q5SRE5 1749 aa3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 KIF1BO60333 1816 aa3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 C17orf102A2RUQ5 167 aa3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 PI4KAP2A4QPH2 592 aa3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 C2CD4BA6NLJ0 364 aa3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 F8W810 466 aa3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 H3BNX3 289 aa3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 PER2O15055 1255 aa3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 SPTLC2O15270 562 aa3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 RNMTO43148 476 aaKnown RBP3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 ZC3H11AO75152 810 aaKnown RBP eCLIP3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 TIPRLO75663 272 aa3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 SERPINC1P01008 464 aa3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 IL1AP01583 271 aa3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 HOXB5P09067 269 aa3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 ATP1A3P13637 1013 aa3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 BDNFP23560 247 aa3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 POU1F1P28069 291 aa3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 HOXA7P31268 230 aaPredicted RBP3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 SOX2P48431 317 aa3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 SETQ01105 290 aaPredicted RBP3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 RHAGQ02094 409 aa3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 NEXNQ0ZGT2 675 aa3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 SEMA3AQ14563 771 aa3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 IL13RA2Q14627 380 aa3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 SLC18A3Q16572 532 aa3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 CCNG2Q16589 344 aa3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 EDRF1Q3B7T1 1238 aa3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 ALG10Q5BKT4 473 aa3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 ALG10BQ5I7T1 473 aa3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 EARS2Q5JPH6 523 aaKnown RBP3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 CCDC30Q5VVM6 783 aa3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 ITPRIPL1Q6GPH6 555 aa3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 FAM57BQ71RH2 274 aa3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 FASTKD5Q7L8L6 764 aaKnown RBP3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 TBC1D1Q86TI0 1168 aaPredicted RBP3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 ZDHHC23Q8IYP9 409 aa3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 NGEFQ8N5V2 710 aa3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 ARFGAP1Q8N6T3 406 aa3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 SCAIQ8N9R8 606 aa3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 DNAAF1Q8NEP3 725 aa3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 SMARCE1Q969G3 411 aa3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 ZNF333Q96JL9 665 aa3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 ZNF347Q96SE7 839 aa3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 H2AFJQ9BTM1 129 aa3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 HERC2P3Q9BVR0 1158 aa3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 ARHGAP39Q9C0H5 1083 aa3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 CCDC68Q9H2F9 335 aa3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 TASP1Q9H6P5 420 aa3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 SYNCQ9H7C4 482 aa3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 ACTR5Q9H9F9 607 aaPredicted RBP3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 SARDHQ9UL12 918 aa3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 RABGAP1Q9Y3P9 1069 aa3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 LYVE1Q9Y5Y7 322 aa3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 SQORQ9Y6N5 450 aa3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 CLTCL1P53675 1640 aa3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 RREB1Q92766 1687 aa3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 HFM1A2PYH4 1435 aa3.87□□□□□ -1.79
PPP4R1-229ENST00000584754 A0A1W2PPC1 479 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms