RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 SCD5Q86SK9 330 aa11.38□□□□□ -0.59
TOP3A-217ENST00000584582 CEP97Q8IW35 865 aa11.38□□□□□ -0.59
TOP3A-217ENST00000584582 SUSD3Q96L08 255 aa11.38□□□□□ -0.59
TOP3A-217ENST00000584582 CDH19Q9H159 772 aa11.38□□□□□ -0.59
TOP3A-217ENST00000584582 COPS7BQ9H9Q2 264 aaPredicted RBP11.38□□□□□ -0.59
TOP3A-217ENST00000584582 SSU72Q9NP77 194 aaKnown RBP11.38□□□□□ -0.59
TOP3A-217ENST00000584582 CYLDQ9NQC7 956 aa11.38□□□□□ -0.59
TOP3A-217ENST00000584582 SLC4A7Q9Y6M7 1214 aa11.38□□□□□ -0.59
TOP3A-217ENST00000584582 SF3B1O75533 1304 aaKnown RBP eCLIP11.38□□□□□ -0.595e-6■■■■■ 131.4
TOP3A-217ENST00000584582 LAMA2P24043 3122 aaKnown RBP11.38□□□□□ -0.59
TOP3A-217ENST00000584582 BIRC5O15392 142 aa11.38□□□□□ -0.59
TOP3A-217ENST00000584582 TPD52P55327 224 aaPredicted RBP11.38□□□□□ -0.59
TOP3A-217ENST00000584582 CDK18Q07002 472 aa11.38□□□□□ -0.59
TOP3A-217ENST00000584582 KLF10Q13118 480 aa11.38□□□□□ -0.59
TOP3A-217ENST00000584582 RNF219Q5W0B1 726 aaPredicted RBP11.38□□□□□ -0.59
TOP3A-217ENST00000584582 ZC3HC1Q86WB0 502 aaKnown RBP11.38□□□□□ -0.59
TOP3A-217ENST00000584582 ZNF398Q8TD17 642 aa11.38□□□□□ -0.59
TOP3A-217ENST00000584582 ACMSDQ8TDX5 336 aa11.38□□□□□ -0.59
TOP3A-217ENST00000584582 TSPAN17Q96FV3 270 aa11.38□□□□□ -0.59
TOP3A-217ENST00000584582 KCNK13Q9HB14 408 aa11.38□□□□□ -0.59
TOP3A-217ENST00000584582 OSER1Q9NX31 292 aa11.38□□□□□ -0.59
TOP3A-217ENST00000584582 SIRPGQ9P1W8 387 aa11.38□□□□□ -0.59
TOP3A-217ENST00000584582 UBA2Q9UBT2 640 aaPredicted RBP11.38□□□□□ -0.59
TOP3A-217ENST00000584582 FETUBQ9UGM5 382 aa11.38□□□□□ -0.59
TOP3A-217ENST00000584582 ZDHHC2Q9UIJ5 367 aa11.38□□□□□ -0.59
TOP3A-217ENST00000584582 VWA7Q9Y334 891 aa11.38□□□□□ -0.59
TOP3A-217ENST00000584582 TCAF1Q9Y4C2 921 aa11.38□□□□□ -0.59
TOP3A-217ENST00000584582 ZFP37Q9Y6Q3 630 aaPredicted RBP11.38□□□□□ -0.59
TOP3A-217ENST00000584582 UBDO15205 165 aa11.38□□□□□ -0.59
TOP3A-217ENST00000584582 B4GALT3O60512 393 aa11.38□□□□□ -0.59
TOP3A-217ENST00000584582 THRAP10827 490 aa11.38□□□□□ -0.59
TOP3A-217ENST00000584582 MYL4P12829 197 aa11.38□□□□□ -0.59
TOP3A-217ENST00000584582 GLDCP23378 1020 aa11.38□□□□□ -0.59
TOP3A-217ENST00000584582 CCNCP24863 283 aa11.38□□□□□ -0.59
TOP3A-217ENST00000584582 SKIV2L2P42285 1042 aaKnown RBP11.38□□□□□ -0.59
TOP3A-217ENST00000584582 PTK2BQ14289 1009 aa11.38□□□□□ -0.59
TOP3A-217ENST00000584582 TMEM259Q4ZIN3 620 aa11.38□□□□□ -0.59
TOP3A-217ENST00000584582 BRMS1LQ5PSV4 323 aa11.38□□□□□ -0.59
TOP3A-217ENST00000584582 PIK3R6Q5UE93 754 aa11.38□□□□□ -0.59
TOP3A-217ENST00000584582 LIPMQ5VYY2 423 aa11.38□□□□□ -0.59
TOP3A-217ENST00000584582 DNAJC14Q6Y2X3 702 aaPredicted RBP11.38□□□□□ -0.59
TOP3A-217ENST00000584582 FRMD7Q6ZUT3 714 aa11.38□□□□□ -0.59
TOP3A-217ENST00000584582 RPAINQ86UA6 219 aa11.38□□□□□ -0.59
TOP3A-217ENST00000584582 KYQ8NBH2 561 aa11.38□□□□□ -0.59
TOP3A-217ENST00000584582 SHKBP1Q8TBC3 707 aa11.38□□□□□ -0.59
TOP3A-217ENST00000584582 MAPK15Q8TD08 544 aa11.38□□□□□ -0.59
TOP3A-217ENST00000584582 MZB1Q8WU39 189 aa11.38□□□□□ -0.59
TOP3A-217ENST00000584582 RPL10LQ96L21 214 aaKnown RBP11.38□□□□□ -0.59
TOP3A-217ENST00000584582 NSMCE4AQ9NXX6 385 aa11.38□□□□□ -0.59
TOP3A-217ENST00000584582 ZMYM5Q9UJ78 669 aa11.38□□□□□ -0.59
TOP3A-217ENST00000584582 AP3B1O00203 1094 aa11.37□□□□□ -0.59
TOP3A-217ENST00000584582 PFDN6O15212 129 aa11.37□□□□□ -0.59
TOP3A-217ENST00000584582 CYBAP13498 195 aa11.37□□□□□ -0.59
TOP3A-217ENST00000584582 XPAP23025 273 aaPredicted RBP11.37□□□□□ -0.59
TOP3A-217ENST00000584582 GSCP56915 257 aaPredicted RBP11.37□□□□□ -0.59
TOP3A-217ENST00000584582 CCDC15Q0P6D6 951 aa11.37□□□□□ -0.59
TOP3A-217ENST00000584582 BTG3Q14201 252 aaPredicted RBP11.37□□□□□ -0.59
TOP3A-217ENST00000584582 LBRQ14739 615 aaKnown RBP11.37□□□□□ -0.59
TOP3A-217ENST00000584582 MAP3K21Q5TCX8 1036 aa11.37□□□□□ -0.59
TOP3A-217ENST00000584582 BNC2Q6ZN30 1099 aaPredicted RBP11.37□□□□□ -0.59
TOP3A-217ENST00000584582 ARHGAP18Q8N392 663 aa11.37□□□□□ -0.59
TOP3A-217ENST00000584582 EME1Q96AY2 570 aa11.37□□□□□ -0.59
TOP3A-217ENST00000584582 CNBD2Q96M20 576 aa11.37□□□□□ -0.59
TOP3A-217ENST00000584582 SLC39A3Q9BRY0 314 aa11.37□□□□□ -0.59
TOP3A-217ENST00000584582 TTPALQ9BTX7 342 aa11.37□□□□□ -0.59
TOP3A-217ENST00000584582 DHRS4Q9BTZ2 278 aa11.37□□□□□ -0.59
TOP3A-217ENST00000584582 CIDEBQ9UHD4 219 aa11.37□□□□□ -0.59
TOP3A-217ENST00000584582 SNX13Q9Y5W8 968 aa11.37□□□□□ -0.59
TOP3A-217ENST00000584582 ZCWPW2A0A1B0GU75 182 aa11.37□□□□□ -0.59
TOP3A-217ENST00000584582 C2orf81A6NN90 581 aa11.37□□□□□ -0.59
TOP3A-217ENST00000584582 AKAP10O43572 662 aa11.37□□□□□ -0.59
TOP3A-217ENST00000584582 SNAP91O60641 907 aa11.37□□□□□ -0.59
TOP3A-217ENST00000584582 GJB5O95377 273 aa11.37□□□□□ -0.59
TOP3A-217ENST00000584582 PIK3R1P27986 724 aa11.37□□□□□ -0.59
TOP3A-217ENST00000584582 SLC11A1P49279 550 aa11.37□□□□□ -0.59
TOP3A-217ENST00000584582 ARSDP51689 593 aa11.37□□□□□ -0.59
TOP3A-217ENST00000584582 BFSP2Q13515 415 aa11.37□□□□□ -0.59
TOP3A-217ENST00000584582 NRF1Q16656 503 aa11.37□□□□□ -0.59
TOP3A-217ENST00000584582 MS4A13Q5J8X5 152 aa11.37□□□□□ -0.59
TOP3A-217ENST00000584582 ATXN7L2Q5T6C5 722 aaPredicted RBP11.37□□□□□ -0.59
TOP3A-217ENST00000584582 KLHDC9Q8NEP7 349 aa11.37□□□□□ -0.59
TOP3A-217ENST00000584582 UCMAQ8WVF2 138 aa11.37□□□□□ -0.59
TOP3A-217ENST00000584582 RTP4Q96DX8 246 aa11.37□□□□□ -0.59
TOP3A-217ENST00000584582 RTP3Q9BQQ7 232 aa11.37□□□□□ -0.59
TOP3A-217ENST00000584582 TRIM8Q9BZR9 551 aa11.37□□□□□ -0.59
TOP3A-217ENST00000584582 LRRC14BA6NHZ5 514 aa11.37□□□□□ -0.59
TOP3A-217ENST00000584582 TMEM88BA6NKF7 163 aa11.37□□□□□ -0.59
TOP3A-217ENST00000584582 ANGPT2O15123 496 aa11.37□□□□□ -0.59
TOP3A-217ENST00000584582 ZBTB14O43829 449 aa11.37□□□□□ -0.59
TOP3A-217ENST00000584582 DLX3O60479 287 aa11.37□□□□□ -0.59
TOP3A-217ENST00000584582 S100BP04271 92 aaPredicted RBP11.37□□□□□ -0.59
TOP3A-217ENST00000584582 LINC00032P0C843 101 aa11.37□□□□□ -0.59
TOP3A-217ENST00000584582 CORO1AP31146 461 aaKnown RBP11.37□□□□□ -0.59
TOP3A-217ENST00000584582 CLLU1OSQ5K130 101 aa11.37□□□□□ -0.59
TOP3A-217ENST00000584582 RTP2Q5QGT7 225 aa11.37□□□□□ -0.59
TOP3A-217ENST00000584582 HECTD2Q5U5R9 776 aa11.37□□□□□ -0.59
TOP3A-217ENST00000584582 ULK4Q96C45 1275 aa11.37□□□□□ -0.59
TOP3A-217ENST00000584582 BTN2A3PQ96KV6 586 aa11.37□□□□□ -0.59
TOP3A-217ENST00000584582 ZNF570Q96NI8 536 aa11.37□□□□□ -0.59
TOP3A-217ENST00000584582 C1orf50Q9BV19 199 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms