RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-231	ENST00000584063	ANGPTL2	Q9UKU9	493 aa		11.72	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	TMEM5	Q9Y2B1	443 aa		11.72	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	TIMM13	Q9Y5L4	95 aa	Predicted RBP	11.72	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	AIM2	O14862	343 aa		11.72	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	AKAP10	O43572	662 aa		11.72	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	APEH	P13798	732 aa	Known RBP	11.72	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	ARSA	P15289	507 aa		11.72	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	PRKACA	P17612	351 aa		11.72	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	CD52	P31358	61 aa		11.72	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	ACADSB	P45954	432 aa		11.72	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	CRYBB1	P53674	252 aa	Predicted RBP	11.72	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	CDC42EP1	Q00587	391 aa		11.72	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	GK3P	Q14409	553 aa		11.72	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	PPM1L	Q5SGD2	360 aa		11.72	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	TEDDM1	Q5T9Z0	273 aa		11.72	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	FRMD7	Q6ZUT3	714 aa		11.72	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	PTAR1	Q7Z6K3	402 aa	Predicted RBP	11.72	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	SPATA6L	Q8N4H0	392 aa		11.72	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	LSMEM1	Q8N8F7	131 aa		11.72	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	PNPLA1	Q8N8W4	532 aa		11.72	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	ACVR1C	Q8NER5	493 aa		11.72	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	FAM149B1	Q96BN6	582 aa		11.72	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	GAD1	Q99259	594 aa		11.72	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	EBNA1BP2	Q99848	306 aa	Known RBP	11.72	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	WDR55	Q9H6Y2	383 aa	Predicted RBP	11.72	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	FARSB	Q9NSD9	589 aa	Known RBP	11.72	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	AP4E1	Q9UPM8	1137 aa		11.72	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	APOBEC2	Q9Y235	224 aa	Known RBP	11.72	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	MTF2	Q9Y483	593 aa	Predicted RBP	11.72	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	MFSD11	O43934	449 aa		11.71	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	TMCC1	O94876	653 aa		11.71	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	POP4	O95707	220 aa	Known RBP	11.71	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	GSR	P00390	522 aa		11.71	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	CD4	P01730	458 aa		11.71	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	CCNF	P41002	786 aa		11.71	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	IRF9	Q00978	393 aa		11.71	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	SPDYA	Q5MJ70	313 aa		11.71	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	LGSN	Q5TDP6	509 aa		11.71	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	SLC9A4	Q6AI14	798 aa		11.71	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	MZT2A	Q6P582	158 aa		11.71	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	HFE2	Q6ZVN8	426 aa		11.71	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	HASPIN	Q8TF76	798 aa		11.71	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	KBTBD7	Q8WVZ9	684 aa		11.71	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	USP13	Q92995	863 aa	Predicted RBP	11.71	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	NCLN	Q969V3	563 aa		11.71	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	DNAJC1	Q96KC8	554 aa	Known RBP	11.71	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	CSPG4P5	Q96PW8	444 aa		11.71	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	AGAP2	Q99490	1192 aa		11.71	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	TUBB6	Q9BUF5	446 aa		11.71	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	SLC4A5	Q9BY07	1137 aa		11.71	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	AGO3	Q9H9G7	860 aa	Known RBP	11.71	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	DTL	Q9NZJ0	730 aa		11.71	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	ITGA11	Q9UKX5	1188 aa		11.71	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	FIS1	Q9Y3D6	152 aa		11.71	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	SNX10	Q9Y5X0	201 aa		11.71	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	NUP205	Q92621	2012 aa		11.71	□□□□□ -0.53
CDK5RAP3-231	ENST00000584063	CCDC160	A6NGH7	325 aa		11.71	□□□□□ -0.54
CDK5RAP3-231	ENST00000584063	CAPN8	A6NHC0	703 aa		11.71	□□□□□ -0.54
CDK5RAP3-231	ENST00000584063	HAT1	O14929	419 aa		11.71	□□□□□ -0.54
CDK5RAP3-231	ENST00000584063	YKT6	O15498	198 aa		11.71	□□□□□ -0.54
CDK5RAP3-231	ENST00000584063	HNRNPCL1	O60812	293 aa	Known RBP	11.71	□□□□□ -0.54
CDK5RAP3-231	ENST00000584063	PFDN1	O60925	122 aa		11.71	□□□□□ -0.54
CDK5RAP3-231	ENST00000584063	CHRNA1	P02708	482 aa		11.71	□□□□□ -0.54
CDK5RAP3-231	ENST00000584063	FGF3	P11487	239 aa	Predicted RBP	11.71	□□□□□ -0.54
CDK5RAP3-231	ENST00000584063	RAG1	P15918	1043 aa		11.71	□□□□□ -0.54
CDK5RAP3-231	ENST00000584063	TPH1	P17752	444 aa		11.71	□□□□□ -0.54
CDK5RAP3-231	ENST00000584063	TYK2	P29597	1187 aa		11.71	□□□□□ -0.54
CDK5RAP3-231	ENST00000584063	CPOX	P36551	454 aa		11.71	□□□□□ -0.54
CDK5RAP3-231	ENST00000584063	GRIA2	P42262	883 aa		11.71	□□□□□ -0.54
CDK5RAP3-231	ENST00000584063	ASMT	P46597	345 aa		11.71	□□□□□ -0.54
CDK5RAP3-231	ENST00000584063	GLRB	P48167	497 aa		11.71	□□□□□ -0.54
CDK5RAP3-231	ENST00000584063	PKNOX1	P55347	436 aa		11.71	□□□□□ -0.54
CDK5RAP3-231	ENST00000584063	MRPS6	P82932	125 aa	Known RBP	11.71	□□□□□ -0.54
CDK5RAP3-231	ENST00000584063	BTK	Q06187	659 aa		11.71	□□□□□ -0.54
CDK5RAP3-231	ENST00000584063	C6orf183	Q5T699	404 aa		11.71	□□□□□ -0.54
CDK5RAP3-231	ENST00000584063	NCBP2-AS2	Q69YL0	99 aa		11.71	□□□□□ -0.54
CDK5RAP3-231	ENST00000584063	TAF2	Q6P1X5	1199 aa		11.71	□□□□□ -0.54
CDK5RAP3-231	ENST00000584063	ANGPTL8	Q6UXH0	198 aa		11.71	□□□□□ -0.54
CDK5RAP3-231	ENST00000584063	SATL1	Q86VE3	508 aa		11.71	□□□□□ -0.54
CDK5RAP3-231	ENST00000584063	MAP7D3	Q8IWC1	876 aa		11.71	□□□□□ -0.54
CDK5RAP3-231	ENST00000584063	SNX31	Q8N9S9	440 aa		11.71	□□□□□ -0.54
CDK5RAP3-231	ENST00000584063	FAM156A	Q8NDB6	213 aa		11.71	□□□□□ -0.54
CDK5RAP3-231	ENST00000584063	PIWIL2	Q8TC59	973 aa	Known RBP	11.71	□□□□□ -0.54
CDK5RAP3-231	ENST00000584063	GDPD5	Q8WTR4	605 aa		11.71	□□□□□ -0.54
CDK5RAP3-231	ENST00000584063	IRGQ	Q8WZA9	623 aa		11.71	□□□□□ -0.54
CDK5RAP3-231	ENST00000584063	C7orf26	Q96N11	449 aa		11.71	□□□□□ -0.54
CDK5RAP3-231	ENST00000584063	CREBZF	Q9NS37	354 aa		11.71	□□□□□ -0.54
CDK5RAP3-231	ENST00000584063	IL20	Q9NYY1	176 aa		11.71	□□□□□ -0.54
CDK5RAP3-231	ENST00000584063	FNIP2	Q9P278	1114 aa		11.71	□□□□□ -0.54
CDK5RAP3-231	ENST00000584063	SOX13	Q9UN79	622 aa		11.71	□□□□□ -0.54
CDK5RAP3-231	ENST00000584063	SATB2	Q9UPW6	733 aa		11.71	□□□□□ -0.54
CDK5RAP3-231	ENST00000584063	PDE4DIP	Q5VU43	2346 aa		11.7	□□□□□ -0.54
CDK5RAP3-231	ENST00000584063	SERTM1	A2A2V5	107 aa		11.7	□□□□□ -0.54
CDK5RAP3-231	ENST00000584063	SDR42E2	A6NKP2	422 aa		11.7	□□□□□ -0.54
CDK5RAP3-231	ENST00000584063	CHURC1-FNTB	B4DL54	471 aa		11.7	□□□□□ -0.54
CDK5RAP3-231	ENST00000584063	TSPAN9	O75954	239 aa		11.7	□□□□□ -0.54
CDK5RAP3-231	ENST00000584063	NELFE	P18615	380 aa	Known RBP	11.7	□□□□□ -0.54
CDK5RAP3-231	ENST00000584063	RAP1GDS1	P52306	607 aa		11.7	□□□□□ -0.54
CDK5RAP3-231	ENST00000584063	CCNI	Q14094	377 aa		11.7	□□□□□ -0.54
CDK5RAP3-231	ENST00000584063	NFE2L1	Q14494	772 aa		11.7	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms