RNA–Protein interactions for RNA: ENST00000583796.1

IFT20-213, Transcript of intraflagellar transport 20, humanhuman

Gene IFT20, Length 1,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-213ENST00000583796 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.3□□□□□ -0.76
IFT20-213ENST00000583796 SLC9A3R1O14745 358 aaPredicted RBP10.3□□□□□ -0.76
IFT20-213ENST00000583796 LDB2O43679 373 aa10.3□□□□□ -0.76
IFT20-213ENST00000583796 TSPAN3O60637 253 aa10.3□□□□□ -0.76
IFT20-213ENST00000583796 TGDSO95455 350 aa10.3□□□□□ -0.76
IFT20-213ENST00000583796 ARNTP27540 789 aa10.3□□□□□ -0.76
IFT20-213ENST00000583796 FOXN2P32314 431 aa10.3□□□□□ -0.76
IFT20-213ENST00000583796 CSKP41240 450 aa10.3□□□□□ -0.76
IFT20-213ENST00000583796 CHRNA4P43681 627 aa10.3□□□□□ -0.76
IFT20-213ENST00000583796 LEPRP48357 1165 aaKnown RBP10.3□□□□□ -0.76
IFT20-213ENST00000583796 KPNA2P52292 529 aaKnown RBP10.3□□□□□ -0.76
IFT20-213ENST00000583796 USP4Q13107 963 aa10.3□□□□□ -0.76
IFT20-213ENST00000583796 CAMK1Q14012 370 aa10.3□□□□□ -0.76
IFT20-213ENST00000583796 PDE1CQ14123 709 aaPredicted RBP10.3□□□□□ -0.76
IFT20-213ENST00000583796 SEPT6Q14141 434 aa10.3□□□□□ -0.76
IFT20-213ENST00000583796 DMC1Q14565 340 aa10.3□□□□□ -0.76
IFT20-213ENST00000583796 CYTH1Q15438 398 aa10.3□□□□□ -0.76
IFT20-213ENST00000583796 CNGA3Q16281 694 aa10.3□□□□□ -0.76
IFT20-213ENST00000583796 TAF1BQ53T94 588 aaPredicted RBP10.3□□□□□ -0.76
IFT20-213ENST00000583796 PRSS36Q5K4E3 855 aa10.3□□□□□ -0.76
IFT20-213ENST00000583796 NEPROQ6NW34 567 aa10.3□□□□□ -0.76
IFT20-213ENST00000583796 ESRP1Q6NXG1 681 aaKnown RBP10.3□□□□□ -0.76
IFT20-213ENST00000583796 C6orf89Q6UWU4 347 aa10.3□□□□□ -0.76
IFT20-213ENST00000583796 SPATA21Q7Z572 469 aa10.3□□□□□ -0.76
IFT20-213ENST00000583796 BBS7Q8IWZ6 715 aa10.3□□□□□ -0.76
IFT20-213ENST00000583796 DCLK2Q8N568 766 aa10.3□□□□□ -0.76
IFT20-213ENST00000583796 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.3□□□□□ -0.76
IFT20-213ENST00000583796 SLC25A41Q8N5S1 370 aa10.3□□□□□ -0.76
IFT20-213ENST00000583796 OR13J1Q8NGT2 312 aa10.3□□□□□ -0.76
IFT20-213ENST00000583796 GPR150Q8NGU9 434 aa10.3□□□□□ -0.76
IFT20-213ENST00000583796 RDH11Q8TC12 318 aa10.3□□□□□ -0.76
IFT20-213ENST00000583796 SH3RF2Q8TEC5 729 aa10.3□□□□□ -0.76
IFT20-213ENST00000583796 STYXQ8WUJ0 223 aa10.3□□□□□ -0.76
IFT20-213ENST00000583796 ZNF778Q96MU6 729 aa10.3□□□□□ -0.76
IFT20-213ENST00000583796 AGAP2Q99490 1192 aa10.3□□□□□ -0.76
IFT20-213ENST00000583796 SIKE1Q9BRV8 207 aa10.3□□□□□ -0.76
IFT20-213ENST00000583796 MANSC1Q9H8J5 431 aa10.3□□□□□ -0.76
IFT20-213ENST00000583796 NOD2Q9HC29 1040 aa10.3□□□□□ -0.76
IFT20-213ENST00000583796 TDP1Q9NUW8 608 aa10.3□□□□□ -0.76
IFT20-213ENST00000583796 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.3□□□□□ -0.76
IFT20-213ENST00000583796 SIRPGQ9P1W8 387 aa10.3□□□□□ -0.76
IFT20-213ENST00000583796 VPS51Q9UID3 782 aa10.3□□□□□ -0.76
IFT20-213ENST00000583796 PHTF1Q9UMS5 762 aa10.3□□□□□ -0.76
IFT20-213ENST00000583796 ARL2BPQ9Y2Y0 163 aa10.3□□□□□ -0.76
IFT20-213ENST00000583796 MYLKQ15746 1914 aa10.29□□□□□ -0.76
IFT20-213ENST00000583796 GRM6O15303 877 aa10.29□□□□□ -0.76
IFT20-213ENST00000583796 SOCS5O75159 536 aa10.29□□□□□ -0.76
IFT20-213ENST00000583796 CD160O95971 181 aa10.29□□□□□ -0.76
IFT20-213ENST00000583796 PENKP01210 267 aaPredicted RBP10.29□□□□□ -0.76
IFT20-213ENST00000583796 SYN1P17600 705 aa10.29□□□□□ -0.76
IFT20-213ENST00000583796 OGNP20774 298 aaKnown RBP10.29□□□□□ -0.76
IFT20-213ENST00000583796 CRABP2P29373 138 aa10.29□□□□□ -0.76
IFT20-213ENST00000583796 CD151P48509 253 aa10.29□□□□□ -0.76
IFT20-213ENST00000583796 SCNN1BP51168 640 aa10.29□□□□□ -0.76
IFT20-213ENST00000583796 CLCN5P51795 746 aa10.29□□□□□ -0.76
IFT20-213ENST00000583796 RHOAP61586 193 aa10.29□□□□□ -0.76
IFT20-213ENST00000583796 PRAMEP78395 509 aa10.29□□□□□ -0.76
IFT20-213ENST00000583796 POU4F1Q01851 419 aa10.29□□□□□ -0.76
IFT20-213ENST00000583796 SULT2A1Q06520 285 aa10.29□□□□□ -0.76
IFT20-213ENST00000583796 TAF1AQ15573 450 aaPredicted RBP10.29□□□□□ -0.76
IFT20-213ENST00000583796 ZKSCAN8Q15776 578 aaPredicted RBP10.29□□□□□ -0.76
IFT20-213ENST00000583796 PLEKHG6Q3KR16 790 aa10.29□□□□□ -0.76
IFT20-213ENST00000583796 ZNF470Q6ECI4 717 aa10.29□□□□□ -0.76
IFT20-213ENST00000583796 MRNIPQ6NTE8 343 aa10.29□□□□□ -0.76
IFT20-213ENST00000583796 NCEH1Q6PIU2 408 aa10.29□□□□□ -0.76
IFT20-213ENST00000583796 CDHR3Q6ZTQ4 885 aa10.29□□□□□ -0.76
IFT20-213ENST00000583796 CLEC14AQ86T13 490 aa10.29□□□□□ -0.76
IFT20-213ENST00000583796 SREK1Q8WXA9 508 aaKnown RBP10.29□□□□□ -0.76
IFT20-213ENST00000583796 ISG20Q96AZ6 181 aaKnown RBP10.29□□□□□ -0.76
IFT20-213ENST00000583796 TSPAN17Q96FV3 270 aa10.29□□□□□ -0.76
IFT20-213ENST00000583796 C7orf26Q96N11 449 aa10.29□□□□□ -0.76
IFT20-213ENST00000583796 TSNARE1Q96NA8 513 aa10.29□□□□□ -0.76
IFT20-213ENST00000583796 CDCA3Q99618 268 aaPredicted RBP10.29□□□□□ -0.76
IFT20-213ENST00000583796 ELAC2Q9BQ52 826 aaKnown RBP10.29□□□□□ -0.76
IFT20-213ENST00000583796 SLC2A11Q9BYW1 496 aa10.29□□□□□ -0.76
IFT20-213ENST00000583796 SLC13A1Q9BZW2 595 aa10.29□□□□□ -0.76
IFT20-213ENST00000583796 CEP44Q9C0F1 390 aa10.29□□□□□ -0.76
IFT20-213ENST00000583796 RABEP2Q9H5N1 569 aa10.29□□□□□ -0.76
IFT20-213ENST00000583796 ABCB8Q9NUT2 735 aa10.29□□□□□ -0.76
IFT20-213ENST00000583796 MARK1Q9P0L2 795 aa10.29□□□□□ -0.76
IFT20-213ENST00000583796 KLHL14Q9P2G3 628 aa10.29□□□□□ -0.76
IFT20-213ENST00000583796 LHX3Q9UBR4 397 aa10.29□□□□□ -0.76
IFT20-213ENST00000583796 FBXO5Q9UKT4 447 aa10.29□□□□□ -0.76
IFT20-213ENST00000583796 VPS9D1Q9Y2B5 631 aa10.29□□□□□ -0.76
IFT20-213ENST00000583796 NUP210Q8TEM1 1887 aaPredicted RBP10.28□□□□□ -0.76
IFT20-213ENST00000583796 A0A096LPK6 155 aa10.28□□□□□ -0.76
IFT20-213ENST00000583796 A0A1W2PQ67 120 aa10.28□□□□□ -0.76
IFT20-213ENST00000583796 C2orf72A6NCS6 295 aa10.28□□□□□ -0.76
IFT20-213ENST00000583796 C2orf81A6NN90 581 aa10.28□□□□□ -0.76
IFT20-213ENST00000583796 PLIN3O60664 434 aa10.28□□□□□ -0.76
IFT20-213ENST00000583796 H2AFYO75367 372 aaKnown RBP10.28□□□□□ -0.76
IFT20-213ENST00000583796 MOSPD3O75425 235 aa10.28□□□□□ -0.76
IFT20-213ENST00000583796 RPP40O75818 363 aaKnown RBP10.28□□□□□ -0.76
IFT20-213ENST00000583796 CA3P07451 260 aa10.28□□□□□ -0.76
IFT20-213ENST00000583796 BPGMP07738 259 aa10.28□□□□□ -0.76
IFT20-213ENST00000583796 TROVE2P10155 538 aaKnown RBP eCLIP10.28□□□□□ -0.76
IFT20-213ENST00000583796 GLDCP23378 1020 aa10.28□□□□□ -0.76
IFT20-213ENST00000583796 GRK2P25098 689 aa10.28□□□□□ -0.76
IFT20-213ENST00000583796 MZF1P28698 734 aaPredicted RBP10.28□□□□□ -0.76
IFT20-213ENST00000583796 IRS1P35568 1242 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms