RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 MREGQ8N565 214 aa12.11□□□□□ -0.47
CCDC57-216ENST00000582885 DNAAF3Q8N9W5 541 aa12.11□□□□□ -0.47
CCDC57-216ENST00000582885 OR52K1Q8NGK4 314 aa12.11□□□□□ -0.47
CCDC57-216ENST00000582885 OR8D1Q8WZ84 308 aa12.11□□□□□ -0.47
CCDC57-216ENST00000582885 SIGLEC10Q96LC7 697 aa12.11□□□□□ -0.47
CCDC57-216ENST00000582885 SRPK1Q96SB4 655 aaKnown RBP12.11□□□□□ -0.47
CCDC57-216ENST00000582885 ACOX2Q99424 681 aa12.11□□□□□ -0.47
CCDC57-216ENST00000582885 NAT9Q9BTE0 207 aa12.11□□□□□ -0.47
CCDC57-216ENST00000582885 IL22Q9GZX6 179 aa12.11□□□□□ -0.47
CCDC57-216ENST00000582885 SUV39H2Q9H5I1 410 aa12.11□□□□□ -0.47
CCDC57-216ENST00000582885 FBRSQ9HAH7 460 aa12.11□□□□□ -0.47
CCDC57-216ENST00000582885 BFARQ9NZS9 450 aa12.11□□□□□ -0.47
CCDC57-216ENST00000582885 DKK3Q9UBP4 350 aa12.11□□□□□ -0.47
CCDC57-216ENST00000582885 IL36AQ9UHA7 158 aa12.11□□□□□ -0.47
CCDC57-216ENST00000582885 PCDHGC4Q9Y5F7 938 aa12.11□□□□□ -0.47
CCDC57-216ENST00000582885 TEX264Q9Y6I9 313 aa12.11□□□□□ -0.47
CCDC57-216ENST00000582885 WASF2Q9Y6W5 498 aa12.11□□□□□ -0.47
CCDC57-216ENST00000582885 TSPAN11A1L157 253 aa12.1□□□□□ -0.47
CCDC57-216ENST00000582885 MAGEB16A2A368 324 aa12.1□□□□□ -0.47
CCDC57-216ENST00000582885 ANKRD66B4E2M5 251 aa12.1□□□□□ -0.47
CCDC57-216ENST00000582885 SIN3BO75182 1162 aa12.1□□□□□ -0.47
CCDC57-216ENST00000582885 AVILO75366 819 aa12.1□□□□□ -0.47
CCDC57-216ENST00000582885 EPHX1P07099 455 aa12.1□□□□□ -0.47
CCDC57-216ENST00000582885 TSHRP16473 764 aa12.1□□□□□ -0.47
CCDC57-216ENST00000582885 TIE1P35590 1138 aa12.1□□□□□ -0.47
CCDC57-216ENST00000582885 MAGEA4P43358 317 aa12.1□□□□□ -0.47
CCDC57-216ENST00000582885 GRIA4P48058 902 aa12.1□□□□□ -0.47
CCDC57-216ENST00000582885 POLR2LP62875 67 aaKnown RBP12.1□□□□□ -0.47
CCDC57-216ENST00000582885 DHX9Q08211 1270 aaKnown RBP12.1□□□□□ -0.47
CCDC57-216ENST00000582885 PDIA2Q13087 525 aaKnown RBP12.1□□□□□ -0.47
CCDC57-216ENST00000582885 MSLNQ13421 630 aaPredicted RBP12.1□□□□□ -0.47
CCDC57-216ENST00000582885 LAMB3Q13751 1172 aa12.1□□□□□ -0.47
CCDC57-216ENST00000582885 MSS51Q4VC12 460 aa12.1□□□□□ -0.47
CCDC57-216ENST00000582885 CCDC38Q502W7 563 aa12.1□□□□□ -0.47
CCDC57-216ENST00000582885 SPDYCQ5MJ68 293 aa12.1□□□□□ -0.47
CCDC57-216ENST00000582885 BRAT1Q6PJG6 821 aa12.1□□□□□ -0.47
CCDC57-216ENST00000582885 TRMT10CQ7L0Y3 403 aaKnown RBP12.1□□□□□ -0.47
CCDC57-216ENST00000582885 TMC3Q7Z5M5 1100 aa12.1□□□□□ -0.47
CCDC57-216ENST00000582885 GSPT2Q8IYD1 628 aaKnown RBP12.1□□□□□ -0.47
CCDC57-216ENST00000582885 GJD3Q8N144 294 aa12.1□□□□□ -0.47
CCDC57-216ENST00000582885 IL17RCQ8NAC3 791 aa12.1□□□□□ -0.47
CCDC57-216ENST00000582885 CHST14Q8NCH0 376 aa12.1□□□□□ -0.47
CCDC57-216ENST00000582885 OR6K2Q8NGY2 324 aa12.1□□□□□ -0.47
CCDC57-216ENST00000582885 PTCD2Q8WV60 388 aaKnown RBP12.1□□□□□ -0.47
CCDC57-216ENST00000582885 PIH1D2Q8WWB5 315 aa12.1□□□□□ -0.47
CCDC57-216ENST00000582885 PWWP2AQ96N64 755 aa12.1□□□□□ -0.47
CCDC57-216ENST00000582885 RANBP9Q96S59 729 aa12.1□□□□□ -0.47
CCDC57-216ENST00000582885 ZDHHC6Q9H6R6 413 aa12.1□□□□□ -0.47
CCDC57-216ENST00000582885 PRSS16Q9NQE7 514 aa12.1□□□□□ -0.47
CCDC57-216ENST00000582885 CACNA2D2Q9NY47 1150 aa12.1□□□□□ -0.47
CCDC57-216ENST00000582885 PPM1HQ9ULR3 514 aa12.1□□□□□ -0.47
CCDC57-216ENST00000582885 PHTF1Q9UMS5 762 aa12.1□□□□□ -0.47
CCDC57-216ENST00000582885 CHKBQ9Y259 395 aa12.1□□□□□ -0.47
CCDC57-216ENST00000582885 PPIL1Q9Y3C6 166 aa12.1□□□□□ -0.47
CCDC57-216ENST00000582885 PCDHB9Q9Y5E1 797 aa12.1□□□□□ -0.47
CCDC57-216ENST00000582885 BDP1A6H8Y1 2624 aa12.09□□□□□ -0.47
CCDC57-216ENST00000582885 KRBA1A5PL33 1030 aa12.09□□□□□ -0.47
CCDC57-216ENST00000582885 ANTXRLA6NF34 631 aa12.09□□□□□ -0.47
CCDC57-216ENST00000582885 BNIP3LO60238 219 aa12.09□□□□□ -0.47
CCDC57-216ENST00000582885 LEFTY1O75610 366 aa12.09□□□□□ -0.47
CCDC57-216ENST00000582885 PDHA1P08559 390 aa12.09□□□□□ -0.47
CCDC57-216ENST00000582885 GSTA2P09210 222 aa12.09□□□□□ -0.47
CCDC57-216ENST00000582885 CHRNB1P11230 501 aa12.09□□□□□ -0.47
CCDC57-216ENST00000582885 HLA-EP13747 358 aa12.09□□□□□ -0.47
CCDC57-216ENST00000582885 GKP32189 559 aa12.09□□□□□ -0.47
CCDC57-216ENST00000582885 CHRNA4P43681 627 aa12.09□□□□□ -0.47
CCDC57-216ENST00000582885 SUOXP51687 545 aa12.09□□□□□ -0.47
CCDC57-216ENST00000582885 SEC13P55735 322 aa12.09□□□□□ -0.47
CCDC57-216ENST00000582885 OLIG2Q13516 323 aa12.09□□□□□ -0.47
CCDC57-216ENST00000582885 LRRC32Q14392 662 aa12.09□□□□□ -0.47
CCDC57-216ENST00000582885 BBS9Q3SYG4 887 aa12.09□□□□□ -0.47
CCDC57-216ENST00000582885 C2orf27AQ580R0 203 aa12.09□□□□□ -0.47
CCDC57-216ENST00000582885 ZNF805Q5CZA5 627 aa12.09□□□□□ -0.47
CCDC57-216ENST00000582885 ARSIQ5FYB1 569 aa12.09□□□□□ -0.47
CCDC57-216ENST00000582885 BEND6Q5SZJ8 279 aaPredicted RBP12.09□□□□□ -0.47
CCDC57-216ENST00000582885 CCDC25Q86WR0 208 aa12.09□□□□□ -0.47
CCDC57-216ENST00000582885 NDUFAF2Q8N183 169 aa12.09□□□□□ -0.47
CCDC57-216ENST00000582885 STK40Q8N2I9 435 aa12.09□□□□□ -0.47
CCDC57-216ENST00000582885 AGGF1Q8N302 714 aaeCLIP12.09□□□□□ -0.47
CCDC57-216ENST00000582885 ZNF366Q8N895 744 aa12.09□□□□□ -0.47
CCDC57-216ENST00000582885 ANKRD7Q92527 254 aa12.09□□□□□ -0.47
CCDC57-216ENST00000582885 TTC25Q96NG3 672 aa12.09□□□□□ -0.47
CCDC57-216ENST00000582885 FAM129BQ96TA1 746 aa12.09□□□□□ -0.47
CCDC57-216ENST00000582885 EBNA1BP2Q99848 306 aaKnown RBP12.09□□□□□ -0.47
CCDC57-216ENST00000582885 C19orf43Q9BQ61 176 aa12.09□□□□□ -0.47
CCDC57-216ENST00000582885 APOL2Q9BQE5 337 aa12.09□□□□□ -0.47
CCDC57-216ENST00000582885 OSBPL6Q9BZF3 934 aa12.09□□□□□ -0.47
CCDC57-216ENST00000582885 RSPH9Q9H1X1 276 aaPredicted RBP12.09□□□□□ -0.47
CCDC57-216ENST00000582885 MTG2Q9H4K7 406 aa12.09□□□□□ -0.47
CCDC57-216ENST00000582885 MRM3Q9HC36 420 aaKnown RBP12.09□□□□□ -0.47
CCDC57-216ENST00000582885 ARFGAP3Q9NP61 516 aa12.09□□□□□ -0.47
CCDC57-216ENST00000582885 SAYSD1Q9NPB0 183 aa12.09□□□□□ -0.47
CCDC57-216ENST00000582885 HACD3Q9P035 362 aa12.09□□□□□ -0.47
CCDC57-216ENST00000582885 FBXL21Q9UKT6 434 aa12.09□□□□□ -0.47
CCDC57-216ENST00000582885 CA14Q9ULX7 337 aa12.09□□□□□ -0.47
CCDC57-216ENST00000582885 PLXNA2O75051 1894 aa12.08□□□□□ -0.48
CCDC57-216ENST00000582885 PLXND1Q9Y4D7 1925 aa12.08□□□□□ -0.48
CCDC57-216ENST00000582885 A0A0J9YYE9 177 aa12.08□□□□□ -0.48
CCDC57-216ENST00000582885 KANSL1LA0AUZ9 987 aa12.08□□□□□ -0.48
CCDC57-216ENST00000582885 CHURC1-FNTBB4DL54 471 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms