RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 TBC1D3DA0A087WVF3 549 aa20.21■□□□□ 0.83
TOP3A-213ENST00000582230 TBC1D3IA0A087WXS9 549 aa20.21■□□□□ 0.83
TOP3A-213ENST00000582230 TBC1D3EA0A087X179 549 aa20.21■□□□□ 0.83
TOP3A-213ENST00000582230 TBC1D3KA0A087X1G2 549 aa20.21■□□□□ 0.83
TOP3A-213ENST00000582230 GOLGA6L10A0A0M3HER8 536 aa20.21■□□□□ 0.83
TOP3A-213ENST00000582230 TBC1D3FA6NER0 549 aaPredicted RBP20.21■□□□□ 0.83
TOP3A-213ENST00000582230 UPK3BL1B0FP48 263 aa20.21■□□□□ 0.83
TOP3A-213ENST00000582230 TBC1D3LB9A6J9 549 aa20.21■□□□□ 0.83
TOP3A-213ENST00000582230 UPK3BL2E5RIL1 263 aa20.21■□□□□ 0.83
TOP3A-213ENST00000582230 KIF2AO00139 706 aaPredicted RBP20.21■□□□□ 0.83
TOP3A-213ENST00000582230 FANCGO15287 622 aa20.21■□□□□ 0.83
TOP3A-213ENST00000582230 PGLSO95336 258 aa20.21■□□□□ 0.83
TOP3A-213ENST00000582230 TBC1D3HP0C7X1 549 aa20.21■□□□□ 0.83
TOP3A-213ENST00000582230 NFKB1P19838 968 aa20.21■□□□□ 0.83
TOP3A-213ENST00000582230 NFKBIAP25963 317 aa20.21■□□□□ 0.83
TOP3A-213ENST00000582230 TAS2R38P59533 333 aa20.21■□□□□ 0.83
TOP3A-213ENST00000582230 RPL26P61254 145 aaKnown RBP20.21■□□□□ 0.83
TOP3A-213ENST00000582230 TRAF2Q12933 501 aa20.21■□□□□ 0.83
TOP3A-213ENST00000582230 TBC1D3GQ6DHY5 549 aa20.21■□□□□ 0.83
TOP3A-213ENST00000582230 TBC1D3CQ6IPX1 549 aa20.21■□□□□ 0.83
TOP3A-213ENST00000582230 PRPF39Q86UA1 669 aaKnown RBP20.21■□□□□ 0.83
TOP3A-213ENST00000582230 TBC1D3Q8IZP1 549 aaPredicted RBP20.21■□□□□ 0.83
TOP3A-213ENST00000582230 PDCD6IPQ8WUM4 868 aaKnown RBP20.21■□□□□ 0.83
TOP3A-213ENST00000582230 LOXL4Q96JB6 756 aa20.21■□□□□ 0.83
TOP3A-213ENST00000582230 RBM15Q96T37 977 aaKnown RBP eCLIP20.21■□□□□ 0.83
TOP3A-213ENST00000582230 VPS45Q9NRW7 570 aa20.21■□□□□ 0.83
TOP3A-213ENST00000582230 PHTF1Q9UMS5 762 aa20.21■□□□□ 0.83
TOP3A-213ENST00000582230 RPL26L1Q9UNX3 145 aaKnown RBP20.21■□□□□ 0.83
TOP3A-213ENST00000582230 FADS3Q9Y5Q0 445 aa20.21■□□□□ 0.83
TOP3A-213ENST00000582230 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.2■□□□□ 0.82
TOP3A-213ENST00000582230 FAM47DPA6NHR8 397 aa20.2■□□□□ 0.82
TOP3A-213ENST00000582230 METTL12A8MUP2 240 aa20.2■□□□□ 0.82
TOP3A-213ENST00000582230 AREL1O15033 823 aa20.2■□□□□ 0.82
TOP3A-213ENST00000582230 TSPAN6O43657 245 aa20.2■□□□□ 0.82
TOP3A-213ENST00000582230 FZD6O60353 706 aa20.2■□□□□ 0.82
TOP3A-213ENST00000582230 CPP00450 1065 aa20.2■□□□□ 0.82
TOP3A-213ENST00000582230 ELP6Q0PNE2 266 aa20.2■□□□□ 0.82
TOP3A-213ENST00000582230 PRPSAP1Q14558 356 aa20.2■□□□□ 0.82
TOP3A-213ENST00000582230 IHHQ14623 411 aa20.2■□□□□ 0.82
TOP3A-213ENST00000582230 CYP1B1Q16678 543 aa20.2■□□□□ 0.82
TOP3A-213ENST00000582230 P3H1Q32P28 736 aa20.2■□□□□ 0.82
TOP3A-213ENST00000582230 ERAP2Q6P179 960 aa20.2■□□□□ 0.82
TOP3A-213ENST00000582230 ARHGEF18Q6ZSZ5 1173 aa20.2■□□□□ 0.82
TOP3A-213ENST00000582230 ZSCAN30Q86W11 494 aa20.2■□□□□ 0.82
TOP3A-213ENST00000582230 ZSWIM9Q86XI8 627 aa20.2■□□□□ 0.82
TOP3A-213ENST00000582230 CREG2Q8IUH2 290 aa20.2■□□□□ 0.82
TOP3A-213ENST00000582230 TMEFF1Q8IYR6 380 aa20.2■□□□□ 0.82
TOP3A-213ENST00000582230 NDUFAF2Q8N183 169 aa20.2■□□□□ 0.82
TOP3A-213ENST00000582230 CCDC110Q8TBZ0 833 aa20.2■□□□□ 0.82
TOP3A-213ENST00000582230 AP1M1Q9BXS5 423 aa20.2■□□□□ 0.82
TOP3A-213ENST00000582230 TDRD1Q9BXT4 1180 aaKnown RBP20.2■□□□□ 0.82
TOP3A-213ENST00000582230 ADGRE3Q9BY15 652 aa20.2■□□□□ 0.82
TOP3A-213ENST00000582230 C6orf106Q9H6K1 298 aaPredicted RBP20.2■□□□□ 0.82
TOP3A-213ENST00000582230 FAM86C1Q9NVL1 165 aa20.2■□□□□ 0.82
TOP3A-213ENST00000582230 FAM153AQ9UHL3 310 aa20.2■□□□□ 0.82
TOP3A-213ENST00000582230 SHROOM3Q8TF72 1996 aa20.2■□□□□ 0.82
TOP3A-213ENST00000582230 NEMP1O14524 444 aa20.19■□□□□ 0.82
TOP3A-213ENST00000582230 ANXA9O76027 345 aa20.19■□□□□ 0.82
TOP3A-213ENST00000582230 ACTN2P35609 894 aa20.19■□□□□ 0.82
TOP3A-213ENST00000582230 ABL2P42684 1182 aa20.19■□□□□ 0.82
TOP3A-213ENST00000582230 PAFAH1B1P43034 410 aa20.19■□□□□ 0.82
TOP3A-213ENST00000582230 CCR5P51681 352 aa20.19■□□□□ 0.82
TOP3A-213ENST00000582230 GDF10P55107 478 aa20.19■□□□□ 0.82
TOP3A-213ENST00000582230 LMNB2Q03252 620 aa20.19■□□□□ 0.82
TOP3A-213ENST00000582230 MPP3Q13368 585 aa20.19■□□□□ 0.82
TOP3A-213ENST00000582230 PARP6Q2NL67 630 aa20.19■□□□□ 0.82
TOP3A-213ENST00000582230 FAM182AQ5T1J6 154 aa20.19■□□□□ 0.82
TOP3A-213ENST00000582230 SYCP2LQ5T4T6 812 aa20.19■□□□□ 0.82
TOP3A-213ENST00000582230 KIAA0895LQ68EN5 471 aa20.19■□□□□ 0.82
TOP3A-213ENST00000582230 CCDC89Q8N998 374 aa20.19■□□□□ 0.82
TOP3A-213ENST00000582230 C12orf50Q8NA57 414 aaPredicted RBP20.19■□□□□ 0.82
TOP3A-213ENST00000582230 SPATA22Q8NHS9 363 aa20.19■□□□□ 0.82
TOP3A-213ENST00000582230 MAGOHBQ96A72 148 aaKnown RBP20.19■□□□□ 0.82
TOP3A-213ENST00000582230 FEM1CQ96JP0 617 aa20.19■□□□□ 0.82
TOP3A-213ENST00000582230 PCDH9Q9HC56 1237 aa20.19■□□□□ 0.82
TOP3A-213ENST00000582230 PCDH12Q9NPG4 1184 aa20.19■□□□□ 0.82
TOP3A-213ENST00000582230 SMARCAL1Q9NZC9 954 aa20.19■□□□□ 0.82
TOP3A-213ENST00000582230 SMG5Q9UPR3 1016 aaKnown RBP20.19■□□□□ 0.82
TOP3A-213ENST00000582230 AAR2Q9Y312 384 aaKnown RBP20.19■□□□□ 0.82
TOP3A-213ENST00000582230 PPIL1Q9Y3C6 166 aa20.19■□□□□ 0.82
TOP3A-213ENST00000582230 C10orf142B7Z368 130 aa20.18■□□□□ 0.82
TOP3A-213ENST00000582230 PROB1E7EW31 1015 aa20.18■□□□□ 0.82
TOP3A-213ENST00000582230 PCDH8O95206 1070 aa20.18■□□□□ 0.82
TOP3A-213ENST00000582230 MT-CYBP00156 380 aaPredicted RBP20.18■□□□□ 0.82
TOP3A-213ENST00000582230 GEMP55040 296 aa20.18■□□□□ 0.82
TOP3A-213ENST00000582230 NHLH1Q02575 133 aa20.18■□□□□ 0.82
TOP3A-213ENST00000582230 LAIR1Q6GTX8 287 aa20.18■□□□□ 0.82
TOP3A-213ENST00000582230 GSTA5Q7RTV2 222 aa20.18■□□□□ 0.82
TOP3A-213ENST00000582230 TRIM69Q86WT6 500 aa20.18■□□□□ 0.82
TOP3A-213ENST00000582230 SLC41A1Q8IVJ1 513 aa20.18■□□□□ 0.82
TOP3A-213ENST00000582230 SUMF1Q8NBK3 374 aa20.18■□□□□ 0.82
TOP3A-213ENST00000582230 ATL2Q8NHH9 583 aa20.18■□□□□ 0.82
TOP3A-213ENST00000582230 PIH1D2Q8WWB5 315 aa20.18■□□□□ 0.82
TOP3A-213ENST00000582230 CAPZA3Q96KX2 299 aa20.18■□□□□ 0.82
TOP3A-213ENST00000582230 HSPA12BQ96MM6 686 aa20.18■□□□□ 0.82
TOP3A-213ENST00000582230 FEZ2Q9UHY8 353 aaPredicted RBP20.18■□□□□ 0.82
TOP3A-213ENST00000582230 CHKBQ9Y259 395 aa20.18■□□□□ 0.82
TOP3A-213ENST00000582230 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.18■□□□□ 0.82
TOP3A-213ENST00000582230 GOLGA6CA6NDK9 693 aa20.17■□□□□ 0.82
TOP3A-213ENST00000582230 GOLGA6BA6NDN3 693 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms