RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 TWSG1Q9GZX9 223 aa3.47□□□□□ -1.85
SMCHD1-206ENST00000581631 PTPRHQ9HD43 1115 aa3.47□□□□□ -1.85
SMCHD1-206ENST00000581631 ZFP57Q9NU63 452 aa3.47□□□□□ -1.85
SMCHD1-206ENST00000581631 PCDHAC2Q9Y5I4 1007 aa3.47□□□□□ -1.85
SMCHD1-206ENST00000581631 MORC2Q9Y6X9 1032 aaPredicted RBP3.47□□□□□ -1.85
SMCHD1-206ENST00000581631 CPED1A4D0V7 1026 aa3.46□□□□□ -1.86
SMCHD1-206ENST00000581631 B9A039 149 aa3.46□□□□□ -1.86
SMCHD1-206ENST00000581631 KIF1CO43896 1103 aaKnown RBP3.46□□□□□ -1.86
SMCHD1-206ENST00000581631 NBNO60934 754 aa3.46□□□□□ -1.86
SMCHD1-206ENST00000581631 TK1P04183 234 aa3.46□□□□□ -1.86
SMCHD1-206ENST00000581631 CD72P21854 359 aa3.46□□□□□ -1.86
SMCHD1-206ENST00000581631 MTNR1AP48039 350 aa3.46□□□□□ -1.86
SMCHD1-206ENST00000581631 CYP4A11Q02928 519 aa3.46□□□□□ -1.86
SMCHD1-206ENST00000581631 ZBTB17Q13105 803 aa3.46□□□□□ -1.86
SMCHD1-206ENST00000581631 SH2D4BQ5SQS7 431 aa3.46□□□□□ -1.86
SMCHD1-206ENST00000581631 ANO1Q5XXA6 986 aa3.46□□□□□ -1.86
SMCHD1-206ENST00000581631 PLA2G4FQ68DD2 849 aa3.46□□□□□ -1.86
SMCHD1-206ENST00000581631 CCDC129Q6ZRS4 1044 aa3.46□□□□□ -1.86
SMCHD1-206ENST00000581631 MOGAT3Q86VF5 341 aa3.46□□□□□ -1.86
SMCHD1-206ENST00000581631 TMC8Q8IU68 726 aa3.46□□□□□ -1.86
SMCHD1-206ENST00000581631 MAB21L3Q8N8X9 362 aa3.46□□□□□ -1.86
SMCHD1-206ENST00000581631 OR4N2Q8NGD1 307 aa3.46□□□□□ -1.86
SMCHD1-206ENST00000581631 LNX1Q8TBB1 728 aaPredicted RBP3.46□□□□□ -1.86
SMCHD1-206ENST00000581631 CCT6BQ92526 530 aa3.46□□□□□ -1.86
SMCHD1-206ENST00000581631 ATOH1Q92858 354 aaPredicted RBP3.46□□□□□ -1.86
SMCHD1-206ENST00000581631 SDCCAG3Q96C92 435 aa3.46□□□□□ -1.86
SMCHD1-206ENST00000581631 ZNF501Q96CX3 271 aaPredicted RBP3.46□□□□□ -1.86
SMCHD1-206ENST00000581631 FEM1CQ96JP0 617 aa3.46□□□□□ -1.86
SMCHD1-206ENST00000581631 ARPC5LQ9BPX5 153 aa3.46□□□□□ -1.86
SMCHD1-206ENST00000581631 TMEM51Q9NW97 253 aa3.46□□□□□ -1.86
SMCHD1-206ENST00000581631 NLKQ9UBE8 527 aa3.46□□□□□ -1.86
SMCHD1-206ENST00000581631 HDAC6Q9UBN7 1215 aa3.46□□□□□ -1.86
SMCHD1-206ENST00000581631 FEM1BQ9UK73 627 aa3.46□□□□□ -1.86
SMCHD1-206ENST00000581631 TCF19Q9Y242 345 aa3.46□□□□□ -1.86
SMCHD1-206ENST00000581631 DERAQ9Y315 318 aa3.46□□□□□ -1.86
SMCHD1-206ENST00000581631 COMMD10Q9Y6G5 202 aa3.46□□□□□ -1.86
SMCHD1-206ENST00000581631 OR6C68A6NDL8 312 aa3.45□□□□□ -1.86
SMCHD1-206ENST00000581631 ZNF500O60304 480 aaPredicted RBP3.45□□□□□ -1.86
SMCHD1-206ENST00000581631 HBP1O60381 514 aa3.45□□□□□ -1.86
SMCHD1-206ENST00000581631 SLC22A3O75751 556 aa3.45□□□□□ -1.86
SMCHD1-206ENST00000581631 GAGE7O76087 117 aa3.45□□□□□ -1.86
SMCHD1-206ENST00000581631 LINC00271P0C7V0 271 aa3.45□□□□□ -1.86
SMCHD1-206ENST00000581631 GAGE12FP0CL80 117 aa3.45□□□□□ -1.86
SMCHD1-206ENST00000581631 GAGE12GP0CL81 117 aa3.45□□□□□ -1.86
SMCHD1-206ENST00000581631 GAGE12IP0CL82 117 aa3.45□□□□□ -1.86
SMCHD1-206ENST00000581631 KRT5P13647 590 aa3.45□□□□□ -1.86
SMCHD1-206ENST00000581631 MARK3P27448 753 aa3.45□□□□□ -1.86
SMCHD1-206ENST00000581631 GJC1P36383 396 aa3.45□□□□□ -1.86
SMCHD1-206ENST00000581631 RPL3P39023 403 aaKnown RBP3.45□□□□□ -1.86
SMCHD1-206ENST00000581631 GRK6P43250 576 aa3.45□□□□□ -1.86
SMCHD1-206ENST00000581631 ACTR2P61160 394 aa3.45□□□□□ -1.86
SMCHD1-206ENST00000581631 GOLGA8FQ08AF8 430 aa3.45□□□□□ -1.86
SMCHD1-206ENST00000581631 FAM27E3Q08E93 113 aa3.45□□□□□ -1.86
SMCHD1-206ENST00000581631 GAGE1Q13065 139 aa3.45□□□□□ -1.86
SMCHD1-206ENST00000581631 GAGE4Q13068 117 aa3.45□□□□□ -1.86
SMCHD1-206ENST00000581631 CALCRLQ16602 461 aa3.45□□□□□ -1.86
SMCHD1-206ENST00000581631 ADCK5Q3MIX3 580 aa3.45□□□□□ -1.86
SMCHD1-206ENST00000581631 PLEKHO1Q53GL0 409 aaPredicted RBP3.45□□□□□ -1.86
SMCHD1-206ENST00000581631 EPHX4Q8IUS5 362 aa3.45□□□□□ -1.86
SMCHD1-206ENST00000581631 FTSJ3Q8IY81 847 aaKnown RBP3.45□□□□□ -1.86
SMCHD1-206ENST00000581631 TMEM57Q8N5G2 664 aa3.45□□□□□ -1.86
SMCHD1-206ENST00000581631 SETD9Q8NE22 299 aa3.45□□□□□ -1.86
SMCHD1-206ENST00000581631 CEP70Q8NHQ1 597 aa3.45□□□□□ -1.86
SMCHD1-206ENST00000581631 NCSTNQ92542 709 aa3.45□□□□□ -1.86
SMCHD1-206ENST00000581631 RNFT2Q96EX2 444 aa3.45□□□□□ -1.86
SMCHD1-206ENST00000581631 MVB12BQ9H7P6 319 aa3.45□□□□□ -1.86
SMCHD1-206ENST00000581631 SMARCAL1Q9NZC9 954 aa3.45□□□□□ -1.86
SMCHD1-206ENST00000581631 GRHL1Q9NZI5 618 aa3.45□□□□□ -1.86
SMCHD1-206ENST00000581631 DNAJC16Q9Y2G8 782 aa3.45□□□□□ -1.86
SMCHD1-206ENST00000581631 RRP7AQ9Y3A4 280 aaKnown RBP3.45□□□□□ -1.86
SMCHD1-206ENST00000581631 TAF1P21675 1872 aa3.44□□□□□ -1.86
SMCHD1-206ENST00000581631 HNRNPCL2B2RXH8 293 aa3.44□□□□□ -1.86
SMCHD1-206ENST00000581631 CHL1O00533 1208 aa3.44□□□□□ -1.86
SMCHD1-206ENST00000581631 PEX14O75381 377 aa3.44□□□□□ -1.86
SMCHD1-206ENST00000581631 TCEA3O75764 348 aa3.44□□□□□ -1.86
SMCHD1-206ENST00000581631 KDM4BO94953 1096 aa3.44□□□□□ -1.86
SMCHD1-206ENST00000581631 VNN2O95498 520 aa3.44□□□□□ -1.86
SMCHD1-206ENST00000581631 IL1AP01583 271 aa3.44□□□□□ -1.86
SMCHD1-206ENST00000581631 YWHAQP27348 245 aa3.44□□□□□ -1.86
SMCHD1-206ENST00000581631 NR0B1P51843 470 aaKnown RBP3.44□□□□□ -1.86
SMCHD1-206ENST00000581631 ME3Q16798 604 aa3.44□□□□□ -1.86
SMCHD1-206ENST00000581631 ACCSLQ4AC99 568 aa3.44□□□□□ -1.86
SMCHD1-206ENST00000581631 FBXO43Q4G163 708 aa3.44□□□□□ -1.86
SMCHD1-206ENST00000581631 CTXN3Q4LDR2 81 aa3.44□□□□□ -1.86
SMCHD1-206ENST00000581631 CBWD5Q5RIA9 395 aa3.44□□□□□ -1.86
SMCHD1-206ENST00000581631 ANKRD45Q5TZF3 282 aa3.44□□□□□ -1.86
SMCHD1-206ENST00000581631 NCAPH2Q6IBW4 605 aa3.44□□□□□ -1.86
SMCHD1-206ENST00000581631 C19orf48Q6RUI8 117 aa3.44□□□□□ -1.86
SMCHD1-206ENST00000581631 KRTAP5-2Q701N4 177 aa3.44□□□□□ -1.86
SMCHD1-206ENST00000581631 C2CD5Q86YS7 1000 aa3.44□□□□□ -1.86
SMCHD1-206ENST00000581631 GHDCQ8N2G8 530 aa3.44□□□□□ -1.86
SMCHD1-206ENST00000581631 MASTLQ96GX5 879 aa3.44□□□□□ -1.86
SMCHD1-206ENST00000581631 RBM4Q9BWF3 364 aaKnown RBP3.44□□□□□ -1.86
SMCHD1-206ENST00000581631 ZNF334Q9HCZ1 680 aaPredicted RBP3.44□□□□□ -1.86
SMCHD1-206ENST00000581631 ITM2CQ9NQX7 267 aa3.44□□□□□ -1.86
SMCHD1-206ENST00000581631 ZNF711Q9Y462 761 aa3.44□□□□□ -1.86
SMCHD1-206ENST00000581631 A0A096LPK6 155 aa3.43□□□□□ -1.86
SMCHD1-206ENST00000581631 IGKV3D-20A0A0C4DH25 116 aa3.43□□□□□ -1.86
SMCHD1-206ENST00000581631 FAM157AC9JC47 383 aa3.43□□□□□ -1.86
SMCHD1-206ENST00000581631 ZNF587BE7ETH6 402 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms