RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 MON1BQ7L1V2 547 aa13.55□□□□□ -0.24
TRAF4-214ENST00000580073 STRADAQ7RTN6 431 aa13.55□□□□□ -0.24
TRAF4-214ENST00000580073 ZNF354CQ86Y25 554 aa13.55□□□□□ -0.24
TRAF4-214ENST00000580073 PHF13Q86YI8 300 aaPredicted RBP13.55□□□□□ -0.24
TRAF4-214ENST00000580073 PHACTR4Q8IZ21 702 aa13.55□□□□□ -0.24
TRAF4-214ENST00000580073 SDR16C5Q8N3Y7 309 aa13.55□□□□□ -0.24
TRAF4-214ENST00000580073 FSTL5Q8N475 847 aaPredicted RBP13.55□□□□□ -0.24
TRAF4-214ENST00000580073 WDR36Q8NI36 951 aaKnown RBP13.55□□□□□ -0.24
TRAF4-214ENST00000580073 IQCDQ96DY2 449 aa13.55□□□□□ -0.24
TRAF4-214ENST00000580073 VCPIP1Q96JH7 1222 aa13.55□□□□□ -0.24
TRAF4-214ENST00000580073 C11orf70Q9BRQ4 267 aa13.55□□□□□ -0.24
TRAF4-214ENST00000580073 OSBPL2Q9H1P3 480 aa13.55□□□□□ -0.24
TRAF4-214ENST00000580073 ASCL3Q9NQ33 180 aa13.55□□□□□ -0.24
TRAF4-214ENST00000580073 ABHD10Q9NUJ1 306 aa13.55□□□□□ -0.24
TRAF4-214ENST00000580073 DONSONQ9NYP3 566 aa13.55□□□□□ -0.24
TRAF4-214ENST00000580073 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.55□□□□□ -0.24
TRAF4-214ENST00000580073 TMEM59LQ9UK28 342 aa13.55□□□□□ -0.24
TRAF4-214ENST00000580073 LY6G6EA0A0G2JKS1 128 aa13.54□□□□□ -0.24
TRAF4-214ENST00000580073 IGLON5A6NGN9 336 aa13.54□□□□□ -0.24
TRAF4-214ENST00000580073 TMEM110-MUSTN1A8MSY1 372 aa13.54□□□□□ -0.24
TRAF4-214ENST00000580073 TMCO5BA8MYB1 307 aa13.54□□□□□ -0.24
TRAF4-214ENST00000580073 LMO7DNF2Z398 122 aa13.54□□□□□ -0.24
TRAF4-214ENST00000580073 SERPING1P05155 500 aa13.54□□□□□ -0.24
TRAF4-214ENST00000580073 UGT2B4P06133 528 aa13.54□□□□□ -0.24
TRAF4-214ENST00000580073 PLA2G2AP14555 144 aa13.54□□□□□ -0.24
TRAF4-214ENST00000580073 PTPN9P43378 593 aa13.54□□□□□ -0.24
TRAF4-214ENST00000580073 ATP11AP98196 1134 aa13.54□□□□□ -0.24
TRAF4-214ENST00000580073 VAC14Q08AM6 782 aa13.54□□□□□ -0.24
TRAF4-214ENST00000580073 TRIM14Q14142 442 aa13.54□□□□□ -0.24
TRAF4-214ENST00000580073 ELOCQ15369 112 aa13.54□□□□□ -0.24
TRAF4-214ENST00000580073 CDO1Q16878 200 aa13.54□□□□□ -0.24
TRAF4-214ENST00000580073 ASTE1Q2TB18 679 aaPredicted RBP13.54□□□□□ -0.24
TRAF4-214ENST00000580073 PRRT3Q5FWE3 981 aa13.54□□□□□ -0.24
TRAF4-214ENST00000580073 ARHGAP40Q5TG30 622 aa13.54□□□□□ -0.24
TRAF4-214ENST00000580073 ACAD10Q6JQN1 1059 aa13.54□□□□□ -0.24
TRAF4-214ENST00000580073 GUSBP11Q6P575 273 aa13.54□□□□□ -0.24
TRAF4-214ENST00000580073 ZNF843Q8N446 348 aa13.54□□□□□ -0.24
TRAF4-214ENST00000580073 OR6C4Q8NGE1 309 aa13.54□□□□□ -0.24
TRAF4-214ENST00000580073 OR8K1Q8NGG5 319 aa13.54□□□□□ -0.24
TRAF4-214ENST00000580073 SNRNP27Q8WVK2 155 aaKnown RBP13.54□□□□□ -0.24
TRAF4-214ENST00000580073 KLF6Q99612 283 aaPredicted RBP13.54□□□□□ -0.24
TRAF4-214ENST00000580073 NCAPGQ9BPX3 1015 aa13.54□□□□□ -0.24
TRAF4-214ENST00000580073 BOCQ9BWV1 1114 aa13.54□□□□□ -0.24
TRAF4-214ENST00000580073 SEPT11Q9NVA2 429 aaKnown RBP13.54□□□□□ -0.24
TRAF4-214ENST00000580073 U3KQA8 63 aa13.54□□□□□ -0.24
TRAF4-214ENST00000580073 A0A087X0T9 212 aa13.53□□□□□ -0.24
TRAF4-214ENST00000580073 CCDC187A0A096LP49 1063 aa13.53□□□□□ -0.24
TRAF4-214ENST00000580073 ANKRD62A6NC57 917 aa13.53□□□□□ -0.24
TRAF4-214ENST00000580073 AKR1B15C9JRZ8 316 aaPredicted RBP13.53□□□□□ -0.24
TRAF4-214ENST00000580073 RAD51BO15315 384 aa13.53□□□□□ -0.24
TRAF4-214ENST00000580073 CCDC172P0C7W6 258 aa13.53□□□□□ -0.24
TRAF4-214ENST00000580073 FAM228BP0C875 321 aa13.53□□□□□ -0.24
TRAF4-214ENST00000580073 TGM2P21980 687 aa13.53□□□□□ -0.24
TRAF4-214ENST00000580073 EIF4A3P38919 411 aaKnown RBP13.53□□□□□ -0.24
TRAF4-214ENST00000580073 ABL2P42684 1182 aa13.53□□□□□ -0.24
TRAF4-214ENST00000580073 AIF1P55008 147 aa13.53□□□□□ -0.24
TRAF4-214ENST00000580073 PPARDQ03181 441 aa13.53□□□□□ -0.24
TRAF4-214ENST00000580073 RAB6CQ53S08 254 aa13.53□□□□□ -0.24
TRAF4-214ENST00000580073 EFHC2Q5JST6 749 aa13.53□□□□□ -0.24
TRAF4-214ENST00000580073 CFAP58Q5T655 872 aa13.53□□□□□ -0.24
TRAF4-214ENST00000580073 FAXCQ5TGI0 409 aa13.53□□□□□ -0.24
TRAF4-214ENST00000580073 MANEALQ5VSG8 457 aa13.53□□□□□ -0.24
TRAF4-214ENST00000580073 LVRNQ6Q4G3 990 aa13.53□□□□□ -0.24
TRAF4-214ENST00000580073 GDPD4Q6W3E5 623 aa13.53□□□□□ -0.24
TRAF4-214ENST00000580073 TTC7BQ86TV6 843 aa13.53□□□□□ -0.24
TRAF4-214ENST00000580073 MCOLN2Q8IZK6 566 aa13.53□□□□□ -0.24
TRAF4-214ENST00000580073 ARL10Q8N8L6 244 aa13.53□□□□□ -0.24
TRAF4-214ENST00000580073 JOSD2Q8TAC2 188 aa13.53□□□□□ -0.24
TRAF4-214ENST00000580073 NTAN1Q96AB6 310 aa13.53□□□□□ -0.24
TRAF4-214ENST00000580073 SLC46A1Q96NT5 459 aa13.53□□□□□ -0.24
TRAF4-214ENST00000580073 STRADBQ9C0K7 418 aa13.53□□□□□ -0.24
TRAF4-214ENST00000580073 RAB6CQ9H0N0 254 aa13.53□□□□□ -0.24
TRAF4-214ENST00000580073 SYNDIG1Q9H7V2 258 aa13.53□□□□□ -0.24
TRAF4-214ENST00000580073 TMPRSS4Q9NRS4 437 aa13.53□□□□□ -0.24
TRAF4-214ENST00000580073 DKK3Q9UBP4 350 aa13.53□□□□□ -0.24
TRAF4-214ENST00000580073 DNAI1Q9UI46 699 aa13.53□□□□□ -0.24
TRAF4-214ENST00000580073 ENTPD2Q9Y5L3 495 aa13.53□□□□□ -0.24
TRAF4-214ENST00000580073 J3QKU1 62 aa13.52□□□□□ -0.25
TRAF4-214ENST00000580073 MUSKO15146 869 aa13.52□□□□□ -0.25
TRAF4-214ENST00000580073 KDELR3O43731 214 aa13.52□□□□□ -0.25
TRAF4-214ENST00000580073 TMCC1O94876 653 aa13.52□□□□□ -0.25
TRAF4-214ENST00000580073 LRIG2O94898 1065 aa13.52□□□□□ -0.25
TRAF4-214ENST00000580073 ITGA2BP08514 1039 aa13.52□□□□□ -0.25
TRAF4-214ENST00000580073 CTSEP14091 401 aa13.52□□□□□ -0.25
TRAF4-214ENST00000580073 CDC25BP30305 580 aa13.52□□□□□ -0.25
TRAF4-214ENST00000580073 ADRA1BP35368 520 aa13.52□□□□□ -0.25
TRAF4-214ENST00000580073 IGFALSP35858 605 aa13.52□□□□□ -0.25
TRAF4-214ENST00000580073 ACVRL1P37023 503 aa13.52□□□□□ -0.25
TRAF4-214ENST00000580073 NSFP46459 744 aaKnown RBP13.52□□□□□ -0.25
TRAF4-214ENST00000580073 PEX5P50542 639 aa13.52□□□□□ -0.25
TRAF4-214ENST00000580073 GSCP56915 257 aaPredicted RBP13.52□□□□□ -0.25
TRAF4-214ENST00000580073 RHOAP61586 193 aa13.52□□□□□ -0.25
TRAF4-214ENST00000580073 MYLK3Q32MK0 819 aa13.52□□□□□ -0.25
TRAF4-214ENST00000580073 INO80DQ53TQ3 878 aaPredicted RBP13.52□□□□□ -0.25
TRAF4-214ENST00000580073 TDRD12Q587J7 1177 aaKnown RBP13.52□□□□□ -0.25
TRAF4-214ENST00000580073 CLEC14AQ86T13 490 aa13.52□□□□□ -0.25
TRAF4-214ENST00000580073 VPS36Q86VN1 386 aa13.52□□□□□ -0.25
TRAF4-214ENST00000580073 NLRP14Q86W24 1093 aa13.52□□□□□ -0.25
TRAF4-214ENST00000580073 GKN2Q86XP6 184 aa13.52□□□□□ -0.25
TRAF4-214ENST00000580073 OR6K2Q8NGY2 324 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms