RNA–Protein interactions for RNA: ENST00000580012.1

NDEL1-207, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3

Gene NDEL1, Length 790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-207ENST00000580012 USP34Q70CQ2 3546 aa22.92■■□□□ 1.26
NDEL1-207ENST00000580012 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa22.92■■□□□ 1.26
NDEL1-207ENST00000580012 LRRC72A6NJI9 287 aa22.92■■□□□ 1.26
NDEL1-207ENST00000580012 PGRMC1O00264 195 aaKnown RBP22.92■■□□□ 1.26
NDEL1-207ENST00000580012 PGLSO95336 258 aa22.92■■□□□ 1.26
NDEL1-207ENST00000580012 ITGAVP06756 1048 aa22.92■■□□□ 1.26
NDEL1-207ENST00000580012 CD86P42081 329 aa22.92■■□□□ 1.26
NDEL1-207ENST00000580012 SLC41A1Q8IVJ1 513 aa22.92■■□□□ 1.26
NDEL1-207ENST00000580012 TMEFF1Q8IYR6 380 aa22.92■■□□□ 1.26
NDEL1-207ENST00000580012 FAM71DQ8N9W8 422 aa22.92■■□□□ 1.26
NDEL1-207ENST00000580012 PIH1D2Q8WWB5 315 aa22.92■■□□□ 1.26
NDEL1-207ENST00000580012 LOXL4Q96JB6 756 aa22.92■■□□□ 1.26
NDEL1-207ENST00000580012 TDRD1Q9BXT4 1180 aaKnown RBP22.92■■□□□ 1.26
NDEL1-207ENST00000580012 PREBQ9HCU5 417 aa22.92■■□□□ 1.26
NDEL1-207ENST00000580012 PPIL1Q9Y3C6 166 aa22.92■■□□□ 1.26
NDEL1-207ENST00000580012 GPR179Q6PRD1 2367 aa22.92■■□□□ 1.26
NDEL1-207ENST00000580012 RIF1Q5UIP0 2472 aaKnown RBP22.91■■□□□ 1.26
NDEL1-207ENST00000580012 PTPRZ1P23471 2315 aaPredicted RBP22.91■■□□□ 1.26
NDEL1-207ENST00000580012 UPK3BL1B0FP48 263 aa22.91■■□□□ 1.26
NDEL1-207ENST00000580012 UPK3BL2E5RIL1 263 aa22.91■■□□□ 1.26
NDEL1-207ENST00000580012 OPHN1O60890 802 aa22.91■■□□□ 1.26
NDEL1-207ENST00000580012 NFKB1P19838 968 aa22.91■■□□□ 1.26
NDEL1-207ENST00000580012 CCR5P51681 352 aa22.91■■□□□ 1.26
NDEL1-207ENST00000580012 GDF10P55107 478 aa22.91■■□□□ 1.26
NDEL1-207ENST00000580012 POLR2LP62875 67 aaKnown RBP22.91■■□□□ 1.26
NDEL1-207ENST00000580012 ELF2Q15723 593 aa22.91■■□□□ 1.26
NDEL1-207ENST00000580012 CYP1B1Q16678 543 aa22.91■■□□□ 1.26
NDEL1-207ENST00000580012 KIAA0895LQ68EN5 471 aa22.91■■□□□ 1.26
NDEL1-207ENST00000580012 KLHDC8BQ8IXV7 354 aa22.91■■□□□ 1.26
NDEL1-207ENST00000580012 FOXJ1Q92949 421 aa22.91■■□□□ 1.26
NDEL1-207ENST00000580012 SMARCAL1Q9NZC9 954 aa22.91■■□□□ 1.26
NDEL1-207ENST00000580012 RIOK3O14730 519 aaKnown RBP22.9■■□□□ 1.26
NDEL1-207ENST00000580012 GFRA3O60609 400 aa22.9■■□□□ 1.26
NDEL1-207ENST00000580012 STK10O94804 968 aaKnown RBP22.9■■□□□ 1.26
NDEL1-207ENST00000580012 IGHV4-34P06331 123 aa22.9■■□□□ 1.26
NDEL1-207ENST00000580012 PDHA1P08559 390 aa22.9■■□□□ 1.26
NDEL1-207ENST00000580012 ITIH2P19823 946 aa22.9■■□□□ 1.26
NDEL1-207ENST00000580012 PTGER3P43115 390 aa22.9■■□□□ 1.26
NDEL1-207ENST00000580012 RPL26P61254 145 aaKnown RBP22.9■■□□□ 1.26
NDEL1-207ENST00000580012 SNX1Q13596 522 aa22.9■■□□□ 1.26
NDEL1-207ENST00000580012 ARMC12Q5T9G4 340 aa22.9■■□□□ 1.26
NDEL1-207ENST00000580012 SYT10Q6XYQ8 523 aa22.9■■□□□ 1.26
NDEL1-207ENST00000580012 PRR23BQ6ZRT6 265 aa22.9■■□□□ 1.26
NDEL1-207ENST00000580012 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.9■■□□□ 1.26
NDEL1-207ENST00000580012 DEFB119Q8N690 84 aa22.9■■□□□ 1.26
NDEL1-207ENST00000580012 SPATA22Q8NHS9 363 aa22.9■■□□□ 1.26
NDEL1-207ENST00000580012 CCDC110Q8TBZ0 833 aa22.9■■□□□ 1.26
NDEL1-207ENST00000580012 DNASE2BQ8WZ79 361 aa22.9■■□□□ 1.26
NDEL1-207ENST00000580012 TRIB3Q96RU7 358 aa22.9■■□□□ 1.26
NDEL1-207ENST00000580012 RBM15Q96T37 977 aaKnown RBP eCLIP22.9■■□□□ 1.26
NDEL1-207ENST00000580012 GORASP1Q9BQQ3 440 aa22.9■■□□□ 1.26
NDEL1-207ENST00000580012 ORAI3Q9BRQ5 295 aa22.9■■□□□ 1.26
NDEL1-207ENST00000580012 GBA3Q9H227 469 aa22.9■■□□□ 1.26
NDEL1-207ENST00000580012 VPS45Q9NRW7 570 aa22.9■■□□□ 1.26
NDEL1-207ENST00000580012 TPX2Q9ULW0 747 aaKnown RBP22.9■■□□□ 1.26
NDEL1-207ENST00000580012 PHTF1Q9UMS5 762 aa22.9■■□□□ 1.26
NDEL1-207ENST00000580012 RPL26L1Q9UNX3 145 aaKnown RBP22.9■■□□□ 1.26
NDEL1-207ENST00000580012 ZNF148Q9UQR1 794 aa22.9■■□□□ 1.26
NDEL1-207ENST00000580012 ZBTB32Q9Y2Y4 487 aaPredicted RBP22.9■■□□□ 1.26
NDEL1-207ENST00000580012 PCDHB9Q9Y5E1 797 aa22.9■■□□□ 1.26
NDEL1-207ENST00000580012 TBC1D3DA0A087WVF3 549 aa22.89■■□□□ 1.25
NDEL1-207ENST00000580012 TBC1D3IA0A087WXS9 549 aa22.89■■□□□ 1.25
NDEL1-207ENST00000580012 TBC1D3EA0A087X179 549 aa22.89■■□□□ 1.25
NDEL1-207ENST00000580012 TBC1D3KA0A087X1G2 549 aa22.89■■□□□ 1.25
NDEL1-207ENST00000580012 TBC1D3FA6NER0 549 aaPredicted RBP22.89■■□□□ 1.25
NDEL1-207ENST00000580012 TBC1D3LB9A6J9 549 aa22.89■■□□□ 1.25
NDEL1-207ENST00000580012 LATO43561 262 aa22.89■■□□□ 1.25
NDEL1-207ENST00000580012 TSPAN6O43657 245 aa22.89■■□□□ 1.25
NDEL1-207ENST00000580012 TBC1D3HP0C7X1 549 aa22.89■■□□□ 1.25
NDEL1-207ENST00000580012 CASQ1P31415 396 aa22.89■■□□□ 1.25
NDEL1-207ENST00000580012 TMEM52BQ4KMG9 183 aa22.89■■□□□ 1.25
NDEL1-207ENST00000580012 TBC1D3GQ6DHY5 549 aa22.89■■□□□ 1.25
NDEL1-207ENST00000580012 ITPRIPL1Q6GPH6 555 aa22.89■■□□□ 1.25
NDEL1-207ENST00000580012 TBC1D3CQ6IPX1 549 aa22.89■■□□□ 1.25
NDEL1-207ENST00000580012 KDELC1Q6UW63 502 aa22.89■■□□□ 1.25
NDEL1-207ENST00000580012 TRIM69Q86WT6 500 aa22.89■■□□□ 1.25
NDEL1-207ENST00000580012 TBC1D3Q8IZP1 549 aaPredicted RBP22.89■■□□□ 1.25
NDEL1-207ENST00000580012 C12orf50Q8NA57 414 aaPredicted RBP22.89■■□□□ 1.25
NDEL1-207ENST00000580012 OXNAD1Q96HP4 312 aaPredicted RBP22.89■■□□□ 1.25
NDEL1-207ENST00000580012 PCDH12Q9NPG4 1184 aa22.89■■□□□ 1.25
NDEL1-207ENST00000580012 RNF14Q9UBS8 474 aa22.89■■□□□ 1.25
NDEL1-207ENST00000580012 FAM153AQ9UHL3 310 aa22.89■■□□□ 1.25
NDEL1-207ENST00000580012 SMG5Q9UPR3 1016 aaKnown RBP22.89■■□□□ 1.25
NDEL1-207ENST00000580012 FANCMQ8IYD8 2048 aa22.89■■□□□ 1.25
NDEL1-207ENST00000580012 MT-CYBP00156 380 aaPredicted RBP22.88■■□□□ 1.25
NDEL1-207ENST00000580012 EPOP01588 193 aa22.88■■□□□ 1.25
NDEL1-207ENST00000580012 TUBB4AP04350 444 aa22.88■■□□□ 1.25
NDEL1-207ENST00000580012 PARP6Q2NL67 630 aa22.88■■□□□ 1.25
NDEL1-207ENST00000580012 P3H1Q32P28 736 aa22.88■■□□□ 1.25
NDEL1-207ENST00000580012 TMEM259Q4ZIN3 620 aa22.88■■□□□ 1.25
NDEL1-207ENST00000580012 CFAP58Q5T655 872 aa22.88■■□□□ 1.25
NDEL1-207ENST00000580012 LAIR1Q6GTX8 287 aa22.88■■□□□ 1.25
NDEL1-207ENST00000580012 C1orf216Q8TAB5 229 aa22.88■■□□□ 1.25
NDEL1-207ENST00000580012 BIRC7Q96CA5 298 aa22.88■■□□□ 1.25
NDEL1-207ENST00000580012 SCRN2Q96FV2 425 aa22.88■■□□□ 1.25
NDEL1-207ENST00000580012 FEM1CQ96JP0 617 aa22.88■■□□□ 1.25
NDEL1-207ENST00000580012 MCCC1Q96RQ3 725 aaPredicted RBP22.88■■□□□ 1.25
NDEL1-207ENST00000580012 AP1M1Q9BXS5 423 aa22.88■■□□□ 1.25
NDEL1-207ENST00000580012 PCDH9Q9HC56 1237 aa22.88■■□□□ 1.25
NDEL1-207ENST00000580012 RSPH14Q9UHP6 348 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms