RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 ARHGEF7Q14155 803 aa12.35□□□□□ -0.43
CDK5RAP3-216ENST00000579853 LRRC14Q15048 493 aa12.35□□□□□ -0.43
CDK5RAP3-216ENST00000579853 KLHL40Q2TBA0 621 aa12.35□□□□□ -0.43
CDK5RAP3-216ENST00000579853 MYLK3Q32MK0 819 aa12.35□□□□□ -0.43
CDK5RAP3-216ENST00000579853 SLC25A52Q3SY17 297 aa12.35□□□□□ -0.43
CDK5RAP3-216ENST00000579853 CERCAMQ5T4B2 595 aa12.35□□□□□ -0.43
CDK5RAP3-216ENST00000579853 OTUD1Q5VV17 481 aaPredicted RBP12.35□□□□□ -0.43
CDK5RAP3-216ENST00000579853 GDPD4Q6W3E5 623 aa12.35□□□□□ -0.43
CDK5RAP3-216ENST00000579853 TP53I13Q8NBR0 393 aaPredicted RBP12.35□□□□□ -0.43
CDK5RAP3-216ENST00000579853 GPR156Q8NFN8 814 aa12.35□□□□□ -0.43
CDK5RAP3-216ENST00000579853 GPBAR1Q8TDU6 330 aa12.35□□□□□ -0.43
CDK5RAP3-216ENST00000579853 ARHGEF2Q92974 986 aaKnown RBP12.35□□□□□ -0.43
CDK5RAP3-216ENST00000579853 USP7Q93009 1102 aa12.35□□□□□ -0.43
CDK5RAP3-216ENST00000579853 KLHL32Q96NJ5 620 aa12.35□□□□□ -0.43
CDK5RAP3-216ENST00000579853 CATSPER2Q96P56 530 aa12.35□□□□□ -0.43
CDK5RAP3-216ENST00000579853 ACP6Q9NPH0 428 aa12.35□□□□□ -0.43
CDK5RAP3-216ENST00000579853 PPARGC1AQ9UBK2 798 aaKnown RBP12.35□□□□□ -0.43
CDK5RAP3-216ENST00000579853 DKK3Q9UBP4 350 aa12.35□□□□□ -0.43
CDK5RAP3-216ENST00000579853 ZNF212Q9UDV6 495 aa12.35□□□□□ -0.43
CDK5RAP3-216ENST00000579853 KLQ9UEF7 1012 aa12.35□□□□□ -0.43
CDK5RAP3-216ENST00000579853 ITM2BQ9Y287 266 aa12.35□□□□□ -0.43
CDK5RAP3-216ENST00000579853 ANKRD17O75179 2603 aaKnown RBP12.35□□□□□ -0.43
CDK5RAP3-216ENST00000579853 ARHGEF17Q96PE2 2063 aaPredicted RBP12.34□□□□□ -0.43
CDK5RAP3-216ENST00000579853 CHD5Q8TDI0 1954 aa12.34□□□□□ -0.43
CDK5RAP3-216ENST00000579853 SPENQ96T58 3664 aaKnown RBP12.34□□□□□ -0.43
CDK5RAP3-216ENST00000579853 ZSCAN5CA6NGD5 496 aaPredicted RBP12.34□□□□□ -0.43
CDK5RAP3-216ENST00000579853 I6L893 689 aaPredicted RBP12.34□□□□□ -0.43
CDK5RAP3-216ENST00000579853 CAPN5O15484 640 aaPredicted RBP12.34□□□□□ -0.43
CDK5RAP3-216ENST00000579853 NUDT21O43809 227 aaKnown RBP12.34□□□□□ -0.43
CDK5RAP3-216ENST00000579853 CD160O95971 181 aa12.34□□□□□ -0.43
CDK5RAP3-216ENST00000579853 TNFP01375 233 aa12.34□□□□□ -0.43
CDK5RAP3-216ENST00000579853 ERBB2P04626 1255 aa12.34□□□□□ -0.43
CDK5RAP3-216ENST00000579853 CASRP41180 1078 aa12.34□□□□□ -0.43
CDK5RAP3-216ENST00000579853 MAPKAPK2P49137 400 aa12.34□□□□□ -0.43
CDK5RAP3-216ENST00000579853 RNASE9P60153 205 aaKnown RBP12.34□□□□□ -0.43
CDK5RAP3-216ENST00000579853 SRP54P61011 504 aaKnown RBP12.34□□□□□ -0.43
CDK5RAP3-216ENST00000579853 CYP4F2P78329 520 aa12.34□□□□□ -0.43
CDK5RAP3-216ENST00000579853 FOXK1P85037 733 aa12.34□□□□□ -0.43
CDK5RAP3-216ENST00000579853 KCNAB2Q13303 367 aa12.34□□□□□ -0.43
CDK5RAP3-216ENST00000579853 NFATC4Q14934 902 aa12.34□□□□□ -0.43
CDK5RAP3-216ENST00000579853 CLCA4Q14CN2 919 aa12.34□□□□□ -0.43
CDK5RAP3-216ENST00000579853 CLPPQ16740 277 aaPredicted RBP12.34□□□□□ -0.43
CDK5RAP3-216ENST00000579853 ALG11Q2TAA5 492 aa12.34□□□□□ -0.43
CDK5RAP3-216ENST00000579853 OGFOD3Q6PK18 319 aa12.34□□□□□ -0.43
CDK5RAP3-216ENST00000579853 RD3Q7Z3Z2 195 aa12.34□□□□□ -0.43
CDK5RAP3-216ENST00000579853 SPRED1Q7Z699 444 aa12.34□□□□□ -0.43
CDK5RAP3-216ENST00000579853 PIM3Q86V86 326 aa12.34□□□□□ -0.43
CDK5RAP3-216ENST00000579853 PASD1Q8IV76 773 aa12.34□□□□□ -0.43
CDK5RAP3-216ENST00000579853 SLITRK4Q8IW52 837 aa12.34□□□□□ -0.43
CDK5RAP3-216ENST00000579853 DRC7Q8IY82 874 aa12.34□□□□□ -0.43
CDK5RAP3-216ENST00000579853 Q8N9G6 341 aaPredicted RBP12.34□□□□□ -0.43
CDK5RAP3-216ENST00000579853 HTR3CQ8WXA8 447 aa12.34□□□□□ -0.43
CDK5RAP3-216ENST00000579853 TSACCQ96A04 125 aaPredicted RBP12.34□□□□□ -0.43
CDK5RAP3-216ENST00000579853 RBM15Q96T37 977 aaKnown RBP eCLIP12.34□□□□□ -0.43
CDK5RAP3-216ENST00000579853 EPN3Q9H201 632 aa12.34□□□□□ -0.43
CDK5RAP3-216ENST00000579853 MAGEH1Q9H213 219 aa12.34□□□□□ -0.43
CDK5RAP3-216ENST00000579853 ANLNQ9NQW6 1124 aa12.34□□□□□ -0.43
CDK5RAP3-216ENST00000579853 MBNL1Q9NR56 388 aaKnown RBP12.34□□□□□ -0.43
CDK5RAP3-216ENST00000579853 FOXJ2Q9P0K8 574 aa12.34□□□□□ -0.43
CDK5RAP3-216ENST00000579853 DGKBQ9Y6T7 804 aa12.34□□□□□ -0.43
CDK5RAP3-216ENST00000579853 RNF215Q9Y6U7 377 aa12.34□□□□□ -0.43
CDK5RAP3-216ENST00000579853 LRRK1Q38SD2 2015 aa12.33□□□□□ -0.43
CDK5RAP3-216ENST00000579853 CLEC18AA5D8T8 446 aa12.33□□□□□ -0.44
CDK5RAP3-216ENST00000579853 C9orf172C9J069 976 aa12.33□□□□□ -0.44
CDK5RAP3-216ENST00000579853 HGSO14964 777 aaPredicted RBP12.33□□□□□ -0.44
CDK5RAP3-216ENST00000579853 CPNE6O95741 557 aa12.33□□□□□ -0.44
CDK5RAP3-216ENST00000579853 XPAP23025 273 aaPredicted RBP12.33□□□□□ -0.44
CDK5RAP3-216ENST00000579853 KELP23276 732 aa12.33□□□□□ -0.44
CDK5RAP3-216ENST00000579853 GKP32189 559 aa12.33□□□□□ -0.44
CDK5RAP3-216ENST00000579853 ETV5P41161 510 aa12.33□□□□□ -0.44
CDK5RAP3-216ENST00000579853 CCR10P46092 362 aa12.33□□□□□ -0.44
CDK5RAP3-216ENST00000579853 POLE2P56282 527 aa12.33□□□□□ -0.44
CDK5RAP3-216ENST00000579853 IRF4Q15306 451 aa12.33□□□□□ -0.44
CDK5RAP3-216ENST00000579853 PTPN20Q4JDL3 420 aa12.33□□□□□ -0.44
CDK5RAP3-216ENST00000579853 PHF19Q5T6S3 580 aa12.33□□□□□ -0.44
CDK5RAP3-216ENST00000579853 TTI2Q6NXR4 508 aa12.33□□□□□ -0.44
CDK5RAP3-216ENST00000579853 TRIM65Q6PJ69 517 aa12.33□□□□□ -0.44
CDK5RAP3-216ENST00000579853 ENPP7Q6UWV6 458 aa12.33□□□□□ -0.44
CDK5RAP3-216ENST00000579853 CLEC18BQ6UXF7 455 aa12.33□□□□□ -0.44
CDK5RAP3-216ENST00000579853 PTRH1Q86Y79 214 aaKnown RBP12.33□□□□□ -0.44
CDK5RAP3-216ENST00000579853 FMR1NBQ8N0W7 255 aaPredicted RBP12.33□□□□□ -0.44
CDK5RAP3-216ENST00000579853 FAM26EQ8N5C1 309 aa12.33□□□□□ -0.44
CDK5RAP3-216ENST00000579853 CLEC18CQ8NCF0 446 aa12.33□□□□□ -0.44
CDK5RAP3-216ENST00000579853 CCDC112Q8NEF3 446 aa12.33□□□□□ -0.44
CDK5RAP3-216ENST00000579853 OR6K2Q8NGY2 324 aa12.33□□□□□ -0.44
CDK5RAP3-216ENST00000579853 HCAR2Q8TDS4 363 aa12.33□□□□□ -0.44
CDK5RAP3-216ENST00000579853 CASKIN2Q8WXE0 1202 aa12.33□□□□□ -0.44
CDK5RAP3-216ENST00000579853 SHC3Q92529 594 aa12.33□□□□□ -0.44
CDK5RAP3-216ENST00000579853 WDR92Q96MX6 357 aa12.33□□□□□ -0.44
CDK5RAP3-216ENST00000579853 GDAP1L1Q96MZ0 367 aa12.33□□□□□ -0.44
CDK5RAP3-216ENST00000579853 TBCBQ99426 244 aa12.33□□□□□ -0.44
CDK5RAP3-216ENST00000579853 APOOQ9BUR5 198 aa12.33□□□□□ -0.44
CDK5RAP3-216ENST00000579853 SLC12A9Q9BXP2 914 aa12.33□□□□□ -0.44
CDK5RAP3-216ENST00000579853 CDH19Q9H159 772 aa12.33□□□□□ -0.44
CDK5RAP3-216ENST00000579853 LRIT1Q9P2V4 623 aa12.33□□□□□ -0.44
CDK5RAP3-216ENST00000579853 APEX2Q9UBZ4 518 aa12.33□□□□□ -0.44
CDK5RAP3-216ENST00000579853 SNX10Q9Y5X0 201 aa12.33□□□□□ -0.44
CDK5RAP3-216ENST00000579853 SDK2Q58EX2 2172 aa12.33□□□□□ -0.44
CDK5RAP3-216ENST00000579853 GOLGA6L4A6NEF3 574 aa12.32□□□□□ -0.44
CDK5RAP3-216ENST00000579853 BECN2A8MW95 431 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms