RNA–Protein interactions for RNA: ENST00000579727.5

RARA-209, Transcript of retinoic acid receptor alpha, humanhuman

TSL 4

Gene RARA, Length 564 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-209ENST00000579727 AP1B1Q10567 949 aa16.5■□□□□ 0.23
RARA-209ENST00000579727 UAP1L1Q3KQV9 507 aa16.5■□□□□ 0.23
RARA-209ENST00000579727 TFDP3Q5H9I0 405 aa16.5■□□□□ 0.23
RARA-209ENST00000579727 PEX26Q7Z412 305 aa16.5■□□□□ 0.23
RARA-209ENST00000579727 ADAT2Q7Z6V5 191 aaKnown RBP16.5■□□□□ 0.23
RARA-209ENST00000579727 PRPF39Q86UA1 669 aaKnown RBP16.5■□□□□ 0.23
RARA-209ENST00000579727 HORMAD1Q86X24 394 aa16.5■□□□□ 0.23
RARA-209ENST00000579727 CCDC13Q8IYE1 715 aa16.5■□□□□ 0.23
RARA-209ENST00000579727 RCOR2Q8IZ40 523 aa16.5■□□□□ 0.23
RARA-209ENST00000579727 EXD1Q8NHP7 514 aa16.5■□□□□ 0.23
RARA-209ENST00000579727 NETO1Q8TDF5 533 aa16.5■□□□□ 0.23
RARA-209ENST00000579727 PDCD6IPQ8WUM4 868 aaKnown RBP16.5■□□□□ 0.23
RARA-209ENST00000579727 ALG3Q92685 438 aa16.5■□□□□ 0.23
RARA-209ENST00000579727 HDAC11Q96DB2 347 aa16.5■□□□□ 0.23
RARA-209ENST00000579727 CALR3Q96L12 384 aaKnown RBP16.5■□□□□ 0.23
RARA-209ENST00000579727 TUBGCP5Q96RT8 1024 aa16.5■□□□□ 0.23
RARA-209ENST00000579727 MGME1Q9BQP7 344 aa16.5■□□□□ 0.23
RARA-209ENST00000579727 WRAP53Q9BUR4 548 aaKnown RBP16.5■□□□□ 0.23
RARA-209ENST00000579727 NOD2Q9HC29 1040 aa16.5■□□□□ 0.23
RARA-209ENST00000579727 TMEM9BQ9NQ34 198 aa16.5■□□□□ 0.23
RARA-209ENST00000579727 LZTFL1Q9NQ48 299 aa16.5■□□□□ 0.23
RARA-209ENST00000579727 RBM22Q9NW64 420 aaKnown RBP eCLIP16.5■□□□□ 0.23
RARA-209ENST00000579727 SEPT10Q9P0V9 454 aa16.5■□□□□ 0.23
RARA-209ENST00000579727 PCDHGC4Q9Y5F7 938 aa16.5■□□□□ 0.23
RARA-209ENST00000579727 PCDHA3Q9Y5H8 950 aa16.5■□□□□ 0.23
RARA-209ENST00000579727 LRRK1Q38SD2 2015 aa16.5■□□□□ 0.23
RARA-209ENST00000579727 FASNP49327 2511 aaKnown RBP16.49■□□□□ 0.23
RARA-209ENST00000579727 CCDC66A2RUB6 948 aa16.49■□□□□ 0.23
RARA-209ENST00000579727 CDX4O14627 284 aaPredicted RBP16.49■□□□□ 0.23
RARA-209ENST00000579727 NEBLO76041 1014 aa16.49■□□□□ 0.23
RARA-209ENST00000579727 WNT1P04628 370 aa16.49■□□□□ 0.23
RARA-209ENST00000579727 HLA-DQB2P05538 268 aa16.49■□□□□ 0.23
RARA-209ENST00000579727 ZFXP17010 805 aaPredicted RBP16.49■□□□□ 0.23
RARA-209ENST00000579727 CR2P20023 1033 aa16.49■□□□□ 0.23
RARA-209ENST00000579727 CTNNA2P26232 953 aa16.49■□□□□ 0.23
RARA-209ENST00000579727 ATXN3P54252 364 aaPredicted RBP16.49■□□□□ 0.23
RARA-209ENST00000579727 AP1S1P61966 158 aa16.49■□□□□ 0.23
RARA-209ENST00000579727 DSC2Q02487 901 aa16.49■□□□□ 0.23
RARA-209ENST00000579727 NSUN2Q08J23 767 aaKnown RBP eCLIP16.49■□□□□ 0.23
RARA-209ENST00000579727 ZBTB17Q13105 803 aa16.49■□□□□ 0.23
RARA-209ENST00000579727 TAZQ16635 292 aa16.49■□□□□ 0.23
RARA-209ENST00000579727 ZNF284Q2VY69 593 aa16.49■□□□□ 0.23
RARA-209ENST00000579727 LRRC49Q8IUZ0 686 aa16.49■□□□□ 0.23
RARA-209ENST00000579727 MINDY1Q8N5J2 469 aa16.49■□□□□ 0.23
RARA-209ENST00000579727 TEX26Q8N6G2 289 aa16.49■□□□□ 0.23
RARA-209ENST00000579727 MAML1Q92585 1016 aa16.49■□□□□ 0.23
RARA-209ENST00000579727 OLFM3Q96PB7 478 aa16.49■□□□□ 0.23
RARA-209ENST00000579727 TSGA13Q96PP4 275 aa16.49■□□□□ 0.23
RARA-209ENST00000579727 NUDCD1Q96RS6 583 aa16.49■□□□□ 0.23
RARA-209ENST00000579727 SEMA3CQ99985 751 aa16.49■□□□□ 0.23
RARA-209ENST00000579727 IL21RQ9HBE5 538 aa16.49■□□□□ 0.23
RARA-209ENST00000579727 AMFRQ9UKV5 643 aa16.49■□□□□ 0.23
RARA-209ENST00000579727 ZFYVE26Q68DK2 2539 aa16.48■□□□□ 0.23
RARA-209ENST00000579727 TSPAN11A1L157 253 aa16.48■□□□□ 0.23
RARA-209ENST00000579727 IGLON5A6NGN9 336 aa16.48■□□□□ 0.23
RARA-209ENST00000579727 UPK3BL1B0FP48 263 aa16.48■□□□□ 0.23
RARA-209ENST00000579727 UPK3BL2E5RIL1 263 aa16.48■□□□□ 0.23
RARA-209ENST00000579727 H0Y8X5 98 aa16.48■□□□□ 0.23
RARA-209ENST00000579727 KCNK3O14649 394 aa16.48■□□□□ 0.23
RARA-209ENST00000579727 AP1G1O43747 822 aa16.48■□□□□ 0.23
RARA-209ENST00000579727 KRT86O43790 486 aa16.48■□□□□ 0.23
RARA-209ENST00000579727 MMP20O60882 483 aa16.48■□□□□ 0.23
RARA-209ENST00000579727 CCDC175P0C221 793 aa16.48■□□□□ 0.23
RARA-209ENST00000579727 CCNB1P14635 433 aa16.48■□□□□ 0.23
RARA-209ENST00000579727 HOXB3P14651 431 aaPredicted RBP16.48■□□□□ 0.23
RARA-209ENST00000579727 HSPA9P38646 679 aaKnown RBP16.48■□□□□ 0.23
RARA-209ENST00000579727 PEX5P50542 639 aa16.48■□□□□ 0.23
RARA-209ENST00000579727 RWDD2BP57060 319 aa16.48■□□□□ 0.23
RARA-209ENST00000579727 RACK1P63244 317 aaKnown RBP16.48■□□□□ 0.23
RARA-209ENST00000579727 PPIDQ08752 370 aaKnown RBP16.48■□□□□ 0.23
RARA-209ENST00000579727 TRAF2Q12933 501 aa16.48■□□□□ 0.23
RARA-209ENST00000579727 ZNF211Q13398 564 aaPredicted RBP16.48■□□□□ 0.23
RARA-209ENST00000579727 HNRNPDQ14103 355 aaKnown RBP16.48■□□□□ 0.23
RARA-209ENST00000579727 TFDP2Q14188 446 aa16.48■□□□□ 0.23
RARA-209ENST00000579727 FGL2Q14314 439 aa16.48■□□□□ 0.23
RARA-209ENST00000579727 GRM3Q14832 879 aa16.48■□□□□ 0.23
RARA-209ENST00000579727 UGP2Q16851 508 aa16.48■□□□□ 0.23
RARA-209ENST00000579727 TMEM259Q4ZIN3 620 aa16.48■□□□□ 0.23
RARA-209ENST00000579727 SETMARQ53H47 684 aaPredicted RBP16.48■□□□□ 0.23
RARA-209ENST00000579727 NAPEPLDQ6IQ20 393 aa16.48■□□□□ 0.23
RARA-209ENST00000579727 KDM7AQ6ZMT4 941 aa16.48■□□□□ 0.23
RARA-209ENST00000579727 ZC3H18Q86VM9 953 aaKnown RBP16.48■□□□□ 0.23
RARA-209ENST00000579727 RAB7BQ96AH8 199 aa16.48■□□□□ 0.23
RARA-209ENST00000579727 ZNF641Q96N77 438 aaPredicted RBP16.48■□□□□ 0.23
RARA-209ENST00000579727 TSGA10Q9BZW7 698 aa16.48■□□□□ 0.23
RARA-209ENST00000579727 POLR1EQ9GZS1 481 aaKnown RBP16.48■□□□□ 0.23
RARA-209ENST00000579727 PCDH12Q9NPG4 1184 aa16.48■□□□□ 0.23
RARA-209ENST00000579727 DKK3Q9UBP4 350 aa16.48■□□□□ 0.23
RARA-209ENST00000579727 COQ6Q9Y2Z9 468 aa16.48■□□□□ 0.23
RARA-209ENST00000579727 SNX11Q9Y5W9 270 aa16.48■□□□□ 0.23
RARA-209ENST00000579727 TRPM6Q9BX84 2022 aa16.48■□□□□ 0.23
RARA-209ENST00000579727 CEP295Q9C0D2 2601 aa16.48■□□□□ 0.23
RARA-209ENST00000579727 A0A1W2PR77 199 aa16.47■□□□□ 0.23
RARA-209ENST00000579727 A8MX80 341 aa16.47■□□□□ 0.23
RARA-209ENST00000579727 TRAFD1O14545 582 aaPredicted RBP16.47■□□□□ 0.23
RARA-209ENST00000579727 PPP1R12AO14974 1030 aaPredicted RBP16.47■□□□□ 0.23
RARA-209ENST00000579727 AREL1O15033 823 aa16.47■□□□□ 0.23
RARA-209ENST00000579727 DDX3YO15523 660 aaKnown RBP16.47■□□□□ 0.23
RARA-209ENST00000579727 PAK4O96013 591 aaPredicted RBP16.47■□□□□ 0.23
RARA-209ENST00000579727 JCHAINP01591 159 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms