RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 IL9RQ01113 521 aa14.98□□□□□ -0.01
SS18-212ENST00000579061 BCL2L1Q07817 233 aa14.98□□□□□ -0.01
SS18-212ENST00000579061 SLC10A7Q0GE19 358 aa14.98□□□□□ -0.01
SS18-212ENST00000579061 ZNF235Q14590 738 aa14.98□□□□□ -0.01
SS18-212ENST00000579061 MESDQ14696 234 aa14.98□□□□□ -0.01
SS18-212ENST00000579061 ATP13A4Q4VNC1 1196 aa14.98□□□□□ -0.01
SS18-212ENST00000579061 ANKRD20A8PQ5CZ79 823 aa14.98□□□□□ -0.01
SS18-212ENST00000579061 RALGPS1Q5JS13 557 aa14.98□□□□□ -0.01
SS18-212ENST00000579061 CFAP58Q5T655 872 aa14.98□□□□□ -0.01
SS18-212ENST00000579061 Q6ZSR6 202 aa14.98□□□□□ -0.01
SS18-212ENST00000579061 KANSL1Q7Z3B3 1105 aa14.98□□□□□ -0.01
SS18-212ENST00000579061 RAB44Q7Z6P3 723 aaPredicted RBP14.98□□□□□ -0.01
SS18-212ENST00000579061 VSIG1Q86XK7 387 aa14.98□□□□□ -0.01
SS18-212ENST00000579061 GATAD2AQ86YP4 633 aa14.98□□□□□ -0.01
SS18-212ENST00000579061 CPNE8Q86YQ8 564 aa14.98□□□□□ -0.01
SS18-212ENST00000579061 CAMK1DQ8IU85 385 aa14.98□□□□□ -0.01
SS18-212ENST00000579061 PCDH19Q8TAB3 1148 aa14.98□□□□□ -0.01
SS18-212ENST00000579061 ECHDC3Q96DC8 303 aa14.98□□□□□ -0.01
SS18-212ENST00000579061 ANP32EQ9BTT0 268 aa14.98□□□□□ -0.01
SS18-212ENST00000579061 C1QTNF7Q9BXJ2 289 aa14.98□□□□□ -0.01
SS18-212ENST00000579061 CALN1Q9BXU9 219 aa14.98□□□□□ -0.01
SS18-212ENST00000579061 RBSNQ9H1K0 784 aa14.98□□□□□ -0.01
SS18-212ENST00000579061 CEP295Q9C0D2 2601 aa14.97□□□□□ -0.01
SS18-212ENST00000579061 PTPRBP23467 1997 aa14.97□□□□□ -0.01
SS18-212ENST00000579061 FAM221BA6H8Z2 402 aa14.97□□□□□ -0.01
SS18-212ENST00000579061 POM121BA6NF01 834 aa14.97□□□□□ -0.01
SS18-212ENST00000579061 TOR1BO14657 336 aa14.97□□□□□ -0.01
SS18-212ENST00000579061 RIOK3O14730 519 aaKnown RBP14.97□□□□□ -0.01
SS18-212ENST00000579061 MUSKO15146 869 aa14.97□□□□□ -0.01
SS18-212ENST00000579061 RAD51BO15315 384 aa14.97□□□□□ -0.01
SS18-212ENST00000579061 LCA5LO95447 670 aa14.97□□□□□ -0.01
SS18-212ENST00000579061 GJC1P36383 396 aa14.97□□□□□ -0.01
SS18-212ENST00000579061 SCNN1BP51168 640 aa14.97□□□□□ -0.01
SS18-212ENST00000579061 ZNF75DP51815 510 aa14.97□□□□□ -0.01
SS18-212ENST00000579061 POLR2LP62875 67 aaKnown RBP14.97□□□□□ -0.01
SS18-212ENST00000579061 GALNT2Q10471 571 aa14.97□□□□□ -0.01
SS18-212ENST00000579061 BNIP3Q12983 259 aa14.97□□□□□ -0.01
SS18-212ENST00000579061 AGERQ15109 404 aa14.97□□□□□ -0.01
SS18-212ENST00000579061 NCBP2-AS2Q69YL0 99 aa14.97□□□□□ -0.01
SS18-212ENST00000579061 ERAP2Q6P179 960 aa14.97□□□□□ -0.01
SS18-212ENST00000579061 PTAR1Q7Z6K3 402 aaPredicted RBP14.97□□□□□ -0.01
SS18-212ENST00000579061 SLCO6A1Q86UG4 719 aa14.97□□□□□ -0.01
SS18-212ENST00000579061 CCDC170Q8IYT3 715 aa14.97□□□□□ -0.01
SS18-212ENST00000579061 FATE1Q969F0 183 aa14.97□□□□□ -0.01
SS18-212ENST00000579061 CENPTQ96BT3 561 aa14.97□□□□□ -0.01
SS18-212ENST00000579061 CNTNAP3BQ96NU0 1288 aa14.97□□□□□ -0.01
SS18-212ENST00000579061 NUDCD1Q96RS6 583 aa14.97□□□□□ -0.01
SS18-212ENST00000579061 MGME1Q9BQP7 344 aa14.97□□□□□ -0.01
SS18-212ENST00000579061 SCNM1Q9BWG6 230 aa14.97□□□□□ -0.01
SS18-212ENST00000579061 CNTNAP3Q9BZ76 1288 aa14.97□□□□□ -0.01
SS18-212ENST00000579061 PCDH12Q9NPG4 1184 aa14.97□□□□□ -0.01
SS18-212ENST00000579061 TOR4AQ9NXH8 423 aa14.97□□□□□ -0.01
SS18-212ENST00000579061 FTSJ1Q9UET6 329 aa14.97□□□□□ -0.01
SS18-212ENST00000579061 ATP8A1Q9Y2Q0 1164 aa14.97□□□□□ -0.01
SS18-212ENST00000579061 NEUROG3Q9Y4Z2 214 aa14.97□□□□□ -0.01
SS18-212ENST00000579061 SPTY2D1-AS1A0A0U1RR47 76 aa14.96□□□□□ -0.01
SS18-212ENST00000579061 TMEM110-MUSTN1A8MSY1 372 aa14.96□□□□□ -0.01
SS18-212ENST00000579061 TRAFD1O14545 582 aaPredicted RBP14.96□□□□□ -0.01
SS18-212ENST00000579061 HYAL3O43820 417 aaPredicted RBP14.96□□□□□ -0.01
SS18-212ENST00000579061 MFSD11O43934 449 aa14.96□□□□□ -0.01
SS18-212ENST00000579061 MMP20O60882 483 aa14.96□□□□□ -0.01
SS18-212ENST00000579061 SOCS5O75159 536 aa14.96□□□□□ -0.01
SS18-212ENST00000579061 KDELR1P24390 212 aa14.96□□□□□ -0.01
SS18-212ENST00000579061 MMP12P39900 470 aa14.96□□□□□ -0.01
SS18-212ENST00000579061 GARSP41250 739 aaKnown RBP14.96□□□□□ -0.01
SS18-212ENST00000579061 SLC1A1P43005 524 aa14.96□□□□□ -0.01
SS18-212ENST00000579061 HADHBP55084 474 aaKnown RBP14.96□□□□□ -0.01
SS18-212ENST00000579061 PFN3P60673 137 aa14.96□□□□□ -0.01
SS18-212ENST00000579061 YPEL5P62699 121 aa14.96□□□□□ -0.01
SS18-212ENST00000579061 LRRC73Q5JTD7 316 aa14.96□□□□□ -0.01
SS18-212ENST00000579061 MARC1Q5VT66 337 aa14.96□□□□□ -0.01
SS18-212ENST00000579061 LRRC38Q5VT99 294 aa14.96□□□□□ -0.01
SS18-212ENST00000579061 TIGD7Q6NT04 549 aaPredicted RBP14.96□□□□□ -0.01
SS18-212ENST00000579061 ZSWIM9Q86XI8 627 aa14.96□□□□□ -0.01
SS18-212ENST00000579061 SLC22A18ASQ8N1D0 253 aa14.96□□□□□ -0.01
SS18-212ENST00000579061 TEX26Q8N6G2 289 aa14.96□□□□□ -0.01
SS18-212ENST00000579061 TSGA13Q96PP4 275 aa14.96□□□□□ -0.01
SS18-212ENST00000579061 AMACRQ9UHK6 382 aa14.96□□□□□ -0.01
SS18-212ENST00000579061 GOLGA4Q13439 2230 aaKnown RBP14.96□□□□□ -0.02
SS18-212ENST00000579061 KNTC1P50748 2209 aa14.95□□□□□ -0.02
SS18-212ENST00000579061 HTRA2O43464 458 aaPredicted RBP14.95□□□□□ -0.02
SS18-212ENST00000579061 LDOC1O95751 146 aaPredicted RBP14.95□□□□□ -0.02
SS18-212ENST00000579061 TOP3BO95985 862 aaKnown RBP14.95□□□□□ -0.02
SS18-212ENST00000579061 ATXN1LP0C7T5 689 aaKnown RBP14.95□□□□□ -0.02
SS18-212ENST00000579061 ITIH2P19823 946 aa14.95□□□□□ -0.02
SS18-212ENST00000579061 MX2P20592 715 aa14.95□□□□□ -0.02
SS18-212ENST00000579061 CCNCP24863 283 aa14.95□□□□□ -0.02
SS18-212ENST00000579061 CYLC1P35663 651 aaPredicted RBP14.95□□□□□ -0.02
SS18-212ENST00000579061 MAGEA1P43355 309 aa14.95□□□□□ -0.02
SS18-212ENST00000579061 MMP13P45452 471 aa14.95□□□□□ -0.02
SS18-212ENST00000579061 HNRNPKP61978 463 aaKnown RBP eCLIP14.95□□□□□ -0.02
SS18-212ENST00000579061 PTK2BQ14289 1009 aa14.95□□□□□ -0.02
SS18-212ENST00000579061 IFI16Q16666 785 aaKnown RBP14.95□□□□□ -0.02
SS18-212ENST00000579061 ZFYVE27Q5T4F4 411 aa14.95□□□□□ -0.02
SS18-212ENST00000579061 PGBD5Q8N414 524 aa14.95□□□□□ -0.02
SS18-212ENST00000579061 CHCHD4Q8N4Q1 142 aa14.95□□□□□ -0.02
SS18-212ENST00000579061 PQLC3Q8N755 202 aa14.95□□□□□ -0.02
SS18-212ENST00000579061 TP53I13Q8NBR0 393 aaPredicted RBP14.95□□□□□ -0.02
SS18-212ENST00000579061 RAPGEF5Q92565 580 aa14.95□□□□□ -0.02
SS18-212ENST00000579061 MAML1Q92585 1016 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms