RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 RTP5Q14D33 572 aa16.03■□□□□ 0.16
CRLF3-203ENST00000578692 TDRD12Q587J7 1177 aaKnown RBP16.03■□□□□ 0.16
CRLF3-203ENST00000578692 AFMIDQ63HM1 303 aa16.03■□□□□ 0.16
CRLF3-203ENST00000578692 SRLQ86TD4 932 aa16.03■□□□□ 0.16
CRLF3-203ENST00000578692 LUZP1Q86V48 1076 aa16.03■□□□□ 0.16
CRLF3-203ENST00000578692 ARHGAP12Q8IWW6 846 aa16.03■□□□□ 0.16
CRLF3-203ENST00000578692 TP53I13Q8NBR0 393 aaPredicted RBP16.03■□□□□ 0.16
CRLF3-203ENST00000578692 TSEN2Q8NCE0 465 aaKnown RBP16.03■□□□□ 0.16
CRLF3-203ENST00000578692 LMX1AQ8TE12 382 aa16.03■□□□□ 0.16
CRLF3-203ENST00000578692 TUBGCP5Q96RT8 1024 aa16.03■□□□□ 0.16
CRLF3-203ENST00000578692 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.03■□□□□ 0.16
CRLF3-203ENST00000578692 USP29Q9HBJ7 922 aa16.03■□□□□ 0.16
CRLF3-203ENST00000578692 EVA1BQ9NVM1 165 aa16.03■□□□□ 0.16
CRLF3-203ENST00000578692 CWC15Q9P013 229 aaKnown RBP16.03■□□□□ 0.16
CRLF3-203ENST00000578692 BZW2Q9Y6E2 419 aaKnown RBP16.03■□□□□ 0.16
CRLF3-203ENST00000578692 A0A1W2PQJ5 194 aa16.02■□□□□ 0.16
CRLF3-203ENST00000578692 TSPAN11A1L157 253 aa16.02■□□□□ 0.16
CRLF3-203ENST00000578692 DFFAO00273 331 aa16.02■□□□□ 0.16
CRLF3-203ENST00000578692 PCK1P35558 622 aa16.02■□□□□ 0.16
CRLF3-203ENST00000578692 EIF4A3P38919 411 aaKnown RBP16.02■□□□□ 0.16
CRLF3-203ENST00000578692 RGRP47804 291 aa16.02■□□□□ 0.16
CRLF3-203ENST00000578692 UBASH3AP57075 661 aa16.02■□□□□ 0.16
CRLF3-203ENST00000578692 IL10RBQ08334 325 aa16.02■□□□□ 0.16
CRLF3-203ENST00000578692 NSUN2Q08J23 767 aaKnown RBP eCLIP16.02■□□□□ 0.16
CRLF3-203ENST00000578692 LRRC14Q15048 493 aa16.02■□□□□ 0.16
CRLF3-203ENST00000578692 COL28A1Q2UY09 1125 aa16.02■□□□□ 0.16
CRLF3-203ENST00000578692 BOLA3Q53S33 107 aa16.02■□□□□ 0.16
CRLF3-203ENST00000578692 CFAP58Q5T655 872 aa16.02■□□□□ 0.16
CRLF3-203ENST00000578692 HGSNATQ68CP4 663 aa16.02■□□□□ 0.16
CRLF3-203ENST00000578692 ZCCHC8Q6NZY4 707 aaKnown RBP16.02■□□□□ 0.16
CRLF3-203ENST00000578692 ERAP2Q6P179 960 aa16.02■□□□□ 0.16
CRLF3-203ENST00000578692 BRAT1Q6PJG6 821 aa16.02■□□□□ 0.16
CRLF3-203ENST00000578692 ARHGAP36Q6ZRI8 547 aa16.02■□□□□ 0.16
CRLF3-203ENST00000578692 CAMK1DQ8IU85 385 aa16.02■□□□□ 0.16
CRLF3-203ENST00000578692 LZTR1Q8N653 840 aa16.02■□□□□ 0.16
CRLF3-203ENST00000578692 DCBLD1Q8N8Z6 715 aa16.02■□□□□ 0.16
CRLF3-203ENST00000578692 SYN2Q92777 582 aaPredicted RBP16.02■□□□□ 0.16
CRLF3-203ENST00000578692 IL12RB2Q99665 862 aa16.02■□□□□ 0.16
CRLF3-203ENST00000578692 ZWILCHQ9H900 591 aa16.02■□□□□ 0.16
CRLF3-203ENST00000578692 SP110Q9HB58 689 aa16.02■□□□□ 0.16
CRLF3-203ENST00000578692 PCDH12Q9NPG4 1184 aa16.02■□□□□ 0.16
CRLF3-203ENST00000578692 SCUBE2Q9NQ36 999 aa16.02■□□□□ 0.16
CRLF3-203ENST00000578692 SPASTQ9UBP0 616 aa16.02■□□□□ 0.16
CRLF3-203ENST00000578692 SALL4Q9UJQ4 1053 aa16.02■□□□□ 0.16
CRLF3-203ENST00000578692 COQ6Q9Y2Z9 468 aa16.02■□□□□ 0.16
CRLF3-203ENST00000578692 LY6G6EA0A0G2JKS1 128 aa16.01■□□□□ 0.15
CRLF3-203ENST00000578692 RIOK3O14730 519 aaKnown RBP16.01■□□□□ 0.15
CRLF3-203ENST00000578692 TPP1O14773 563 aa16.01■□□□□ 0.15
CRLF3-203ENST00000578692 OPA1O60313 960 aa16.01■□□□□ 0.15
CRLF3-203ENST00000578692 GP1BAP07359 652 aa16.01■□□□□ 0.15
CRLF3-203ENST00000578692 IL1R2P27930 398 aa16.01■□□□□ 0.15
CRLF3-203ENST00000578692 SERPINA4P29622 427 aa16.01■□□□□ 0.15
CRLF3-203ENST00000578692 PBX1P40424 430 aa16.01■□□□□ 0.15
CRLF3-203ENST00000578692 SEMG2Q02383 582 aa16.01■□□□□ 0.15
CRLF3-203ENST00000578692 DPYSQ14117 519 aa16.01■□□□□ 0.15
CRLF3-203ENST00000578692 RFTN1Q14699 578 aaPredicted RBP16.01■□□□□ 0.15
CRLF3-203ENST00000578692 DEFB133Q30KQ1 61 aa16.01■□□□□ 0.15
CRLF3-203ENST00000578692 FAXCQ5TGI0 409 aa16.01■□□□□ 0.15
CRLF3-203ENST00000578692 NPWQ8N729 165 aa16.01■□□□□ 0.15
CRLF3-203ENST00000578692 CPLX3Q8WVH0 158 aa16.01■□□□□ 0.15
CRLF3-203ENST00000578692 CINPQ9BW66 212 aaPredicted RBP16.01■□□□□ 0.15
CRLF3-203ENST00000578692 ABCG4Q9H172 646 aa16.01■□□□□ 0.15
CRLF3-203ENST00000578692 TCEAL2Q9H3H9 227 aaPredicted RBP16.01■□□□□ 0.15
CRLF3-203ENST00000578692 ATP13A3Q9H7F0 1226 aa16.01■□□□□ 0.15
CRLF3-203ENST00000578692 APOBEC3BQ9UH17 382 aaKnown RBP16.01■□□□□ 0.15
CRLF3-203ENST00000578692 U3KQA8 63 aa16.01■□□□□ 0.15
CRLF3-203ENST00000578692 A0A087WV48 116 aa16■□□□□ 0.15
CRLF3-203ENST00000578692 H3BRJ5 948 aa16■□□□□ 0.15
CRLF3-203ENST00000578692 LZTS3O60299 673 aaPredicted RBP16■□□□□ 0.15
CRLF3-203ENST00000578692 SERPING1P05155 500 aa16■□□□□ 0.15
CRLF3-203ENST00000578692 C6P13671 934 aa16■□□□□ 0.15
CRLF3-203ENST00000578692 ARL4AP40617 200 aa16■□□□□ 0.15
CRLF3-203ENST00000578692 LIG3P49916 1009 aa16■□□□□ 0.15
CRLF3-203ENST00000578692 PEX5P50542 639 aa16■□□□□ 0.15
CRLF3-203ENST00000578692 ADKP55263 362 aaKnown RBP16■□□□□ 0.15
CRLF3-203ENST00000578692 PPARDQ03181 441 aa16■□□□□ 0.15
CRLF3-203ENST00000578692 BCL2L1Q07817 233 aa16■□□□□ 0.15
CRLF3-203ENST00000578692 C1orf61Q13536 156 aa16■□□□□ 0.15
CRLF3-203ENST00000578692 PIGHQ14442 188 aaPredicted RBP16■□□□□ 0.15
CRLF3-203ENST00000578692 IRF4Q15306 451 aa16■□□□□ 0.15
CRLF3-203ENST00000578692 DPYSL2Q16555 572 aa16■□□□□ 0.15
CRLF3-203ENST00000578692 WSCD2Q2TBF2 565 aa16■□□□□ 0.15
CRLF3-203ENST00000578692 PRRT3Q5FWE3 981 aa16■□□□□ 0.15
CRLF3-203ENST00000578692 MACC1Q6ZN28 852 aa16■□□□□ 0.15
CRLF3-203ENST00000578692 ZSWIM9Q86XI8 627 aa16■□□□□ 0.15
CRLF3-203ENST00000578692 TP53INP2Q8IXH6 220 aa16■□□□□ 0.15
CRLF3-203ENST00000578692 PHACTR4Q8IZ21 702 aa16■□□□□ 0.15
CRLF3-203ENST00000578692 RBFAQ8N0V3 343 aa16■□□□□ 0.15
CRLF3-203ENST00000578692 IFI44Q8TCB0 444 aa16■□□□□ 0.15
CRLF3-203ENST00000578692 HSPH1Q92598 858 aa16■□□□□ 0.15
CRLF3-203ENST00000578692 SLC13A1Q9BZW2 595 aa16■□□□□ 0.15
CRLF3-203ENST00000578692 NCKIPSDQ9NZQ3 722 aa16■□□□□ 0.15
CRLF3-203ENST00000578692 PNMA8BQ9ULN7 279 aaPredicted RBP16■□□□□ 0.15
CRLF3-203ENST00000578692 CAPN11Q9UMQ6 739 aa16■□□□□ 0.15
CRLF3-203ENST00000578692 ATP8A1Q9Y2Q0 1164 aa16■□□□□ 0.15
CRLF3-203ENST00000578692 LRRK1Q38SD2 2015 aa16■□□□□ 0.15
CRLF3-203ENST00000578692 URB1O60287 2271 aaKnown RBP16■□□□□ 0.15
CRLF3-203ENST00000578692 CPED1A4D0V7 1026 aa16■□□□□ 0.15
CRLF3-203ENST00000578692 TMEM110-MUSTN1A8MSY1 372 aa16■□□□□ 0.15
CRLF3-203ENST00000578692 GOLGA6L19H0YKK7 550 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms