RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 MRPL43Q8N983 215 aaKnown RBP11.21□□□□□ -0.61
SKA2-204ENST00000578519 DCAF4L2Q8NA75 395 aa11.21□□□□□ -0.61
SKA2-204ENST00000578519 TDRD5Q8NAT2 981 aaKnown RBP11.21□□□□□ -0.61
SKA2-204ENST00000578519 GPR150Q8NGU9 434 aa11.21□□□□□ -0.61
SKA2-204ENST00000578519 FAM45AQ8TCE6 357 aa11.21□□□□□ -0.61
SKA2-204ENST00000578519 MICAL1Q8TDZ2 1067 aa11.21□□□□□ -0.61
SKA2-204ENST00000578519 DDI1Q8WTU0 396 aa11.21□□□□□ -0.61
SKA2-204ENST00000578519 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.21□□□□□ -0.612e-9■■■■■ 43.2
SKA2-204ENST00000578519 ELMO2Q96JJ3 720 aa11.21□□□□□ -0.61
SKA2-204ENST00000578519 RAB3IPQ96QF0 476 aaPredicted RBP11.21□□□□□ -0.61
SKA2-204ENST00000578519 TCF12Q99081 682 aa11.21□□□□□ -0.61
SKA2-204ENST00000578519 TTC1Q99614 292 aa11.21□□□□□ -0.61
SKA2-204ENST00000578519 TCF25Q9BQ70 676 aa11.21□□□□□ -0.61
SKA2-204ENST00000578519 LBHD1Q9BQE6 289 aaPredicted RBP11.21□□□□□ -0.61
SKA2-204ENST00000578519 IL21Q9HBE4 155 aa11.21□□□□□ -0.61
SKA2-204ENST00000578519 ALG13Q9NP73 1137 aaKnown RBP11.21□□□□□ -0.61
SKA2-204ENST00000578519 NPHS2Q9NP85 383 aa11.21□□□□□ -0.61
SKA2-204ENST00000578519 SLCO1B3Q9NPD5 702 aa11.21□□□□□ -0.61
SKA2-204ENST00000578519 SAR1AQ9NR31 198 aa11.21□□□□□ -0.61
SKA2-204ENST00000578519 SMPD4Q9NXE4 827 aa11.21□□□□□ -0.61
SKA2-204ENST00000578519 TBC1D14Q9P2M4 693 aa11.21□□□□□ -0.61
SKA2-204ENST00000578519 RPL26L1Q9UNX3 145 aaKnown RBP11.21□□□□□ -0.61
SKA2-204ENST00000578519 SORCS3Q9UPU3 1222 aa11.21□□□□□ -0.61
SKA2-204ENST00000578519 RUVBL2Q9Y230 463 aaKnown RBP11.21□□□□□ -0.61
SKA2-204ENST00000578519 APOBEC2Q9Y235 224 aaKnown RBP11.21□□□□□ -0.61
SKA2-204ENST00000578519 CAPN7Q9Y6W3 813 aa11.21□□□□□ -0.61
SKA2-204ENST00000578519 TET1Q8NFU7 2136 aa11.21□□□□□ -0.62
SKA2-204ENST00000578519 LTBP2Q14767 1821 aa11.21□□□□□ -0.62
SKA2-204ENST00000578519 A0A0D9SEW6 157 aa11.2□□□□□ -0.62
SKA2-204ENST00000578519 A0A1W2PQ67 120 aa11.2□□□□□ -0.62
SKA2-204ENST00000578519 SLCO1B7G3V0H7 640 aa11.2□□□□□ -0.62
SKA2-204ENST00000578519 TRIM13O60858 407 aa11.2□□□□□ -0.62
SKA2-204ENST00000578519 RBP1P09455 135 aa11.2□□□□□ -0.62
SKA2-204ENST00000578519 OGNP20774 298 aaKnown RBP11.2□□□□□ -0.62
SKA2-204ENST00000578519 PMLP29590 882 aa11.2□□□□□ -0.62
SKA2-204ENST00000578519 AVPR1AP37288 418 aa11.2□□□□□ -0.62
SKA2-204ENST00000578519 CSNK1DP48730 415 aa11.2□□□□□ -0.62
SKA2-204ENST00000578519 LIG3P49916 1009 aa11.2□□□□□ -0.62
SKA2-204ENST00000578519 EPHB1P54762 984 aa11.2□□□□□ -0.62
SKA2-204ENST00000578519 RHOAP61586 193 aa11.2□□□□□ -0.62
SKA2-204ENST00000578519 ACVR1Q04771 509 aa11.2□□□□□ -0.62
SKA2-204ENST00000578519 RAD51Q06609 339 aa11.2□□□□□ -0.62
SKA2-204ENST00000578519 BST1Q10588 318 aa11.2□□□□□ -0.62
SKA2-204ENST00000578519 CYTH1Q15438 398 aa11.2□□□□□ -0.62
SKA2-204ENST00000578519 TBCCQ15814 346 aa11.2□□□□□ -0.62
SKA2-204ENST00000578519 GALNTL6Q49A17 601 aa11.2□□□□□ -0.62
SKA2-204ENST00000578519 AARS2Q5JTZ9 985 aaKnown RBP11.2□□□□□ -0.62
SKA2-204ENST00000578519 TMEM240Q5SV17 173 aa11.2□□□□□ -0.62
SKA2-204ENST00000578519 TXNDC8Q6A555 127 aa11.2□□□□□ -0.62
SKA2-204ENST00000578519 ZNF470Q6ECI4 717 aa11.2□□□□□ -0.62
SKA2-204ENST00000578519 CDHR3Q6ZTQ4 885 aa11.2□□□□□ -0.62
SKA2-204ENST00000578519 C10orf67Q8IYJ2 551 aa11.2□□□□□ -0.62
SKA2-204ENST00000578519 PGBD5Q8N414 524 aa11.2□□□□□ -0.62
SKA2-204ENST00000578519 AFAP1L2Q8N4X5 818 aa11.2□□□□□ -0.62
SKA2-204ENST00000578519 PAF1Q8N7H5 531 aa11.2□□□□□ -0.62
SKA2-204ENST00000578519 MAB21L3Q8N8X9 362 aa11.2□□□□□ -0.62
SKA2-204ENST00000578519 BLOC1S5Q8TDH9 187 aa11.2□□□□□ -0.62
SKA2-204ENST00000578519 C10orf82Q8WW14 230 aa11.2□□□□□ -0.62
SKA2-204ENST00000578519 BADQ92934 168 aa11.2□□□□□ -0.62
SKA2-204ENST00000578519 PRICKLE1Q96MT3 831 aaPredicted RBP11.2□□□□□ -0.62
SKA2-204ENST00000578519 C19orf43Q9BQ61 176 aa11.2□□□□□ -0.62
SKA2-204ENST00000578519 CORO1BQ9BR76 489 aa11.2□□□□□ -0.62
SKA2-204ENST00000578519 FEM1AQ9BSK4 669 aa11.2□□□□□ -0.62
SKA2-204ENST00000578519 HTATIP2Q9BUP3 242 aa11.2□□□□□ -0.62
SKA2-204ENST00000578519 CCDC68Q9H2F9 335 aa11.2□□□□□ -0.62
SKA2-204ENST00000578519 TASP1Q9H6P5 420 aa11.2□□□□□ -0.62
SKA2-204ENST00000578519 ZNF334Q9HCZ1 680 aaPredicted RBP11.2□□□□□ -0.62
SKA2-204ENST00000578519 TLR9Q9NR96 1032 aa11.2□□□□□ -0.62
SKA2-204ENST00000578519 INTS10Q9NVR2 710 aaKnown RBP11.2□□□□□ -0.62
SKA2-204ENST00000578519 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.2□□□□□ -0.62
SKA2-204ENST00000578519 COPG2Q9UBF2 871 aa11.2□□□□□ -0.62
SKA2-204ENST00000578519 ZFP69BQ9UJL9 534 aa11.2□□□□□ -0.62
SKA2-204ENST00000578519 ARHGAP26Q9UNA1 814 aa11.2□□□□□ -0.62
SKA2-204ENST00000578519 F8W8V4 182 aa11.19□□□□□ -0.62
SKA2-204ENST00000578519 TRAFD1O14545 582 aaPredicted RBP11.19□□□□□ -0.62
SKA2-204ENST00000578519 SLC9A3R1O14745 358 aaPredicted RBP11.19□□□□□ -0.62
SKA2-204ENST00000578519 DNAJC6O75061 913 aa11.19□□□□□ -0.62
SKA2-204ENST00000578519 SNNO75324 88 aaPredicted RBP11.19□□□□□ -0.62
SKA2-204ENST00000578519 UBOX5O94941 541 aa11.19□□□□□ -0.62
SKA2-204ENST00000578519 ATXN1LP0C7T5 689 aaKnown RBP11.19□□□□□ -0.62
SKA2-204ENST00000578519 SAT1P21673 171 aa11.19□□□□□ -0.62
SKA2-204ENST00000578519 LPOP22079 712 aaPredicted RBP11.19□□□□□ -0.62
SKA2-204ENST00000578519 NFKBIAP25963 317 aa11.19□□□□□ -0.62
SKA2-204ENST00000578519 SERPINB5P36952 375 aa11.19□□□□□ -0.62
SKA2-204ENST00000578519 SLC1A2P43004 574 aa11.19□□□□□ -0.62
SKA2-204ENST00000578519 CHRNA4P43681 627 aa11.19□□□□□ -0.62
SKA2-204ENST00000578519 SLC1A6P48664 564 aa11.19□□□□□ -0.62
SKA2-204ENST00000578519 PLK1P53350 603 aa11.19□□□□□ -0.62
SKA2-204ENST00000578519 ABCE1P61221 599 aaKnown RBP11.19□□□□□ -0.62
SKA2-204ENST00000578519 OCRLQ01968 901 aa11.19□□□□□ -0.62
SKA2-204ENST00000578519 SULT2A1Q06520 285 aa11.19□□□□□ -0.62
SKA2-204ENST00000578519 BNIP1Q12981 228 aa11.19□□□□□ -0.62
SKA2-204ENST00000578519 DMC1Q14565 340 aa11.19□□□□□ -0.62
SKA2-204ENST00000578519 CFAP157Q5JU67 520 aa11.19□□□□□ -0.62
SKA2-204ENST00000578519 CXorf57Q6NSI4 855 aaKnown RBP11.19□□□□□ -0.62
SKA2-204ENST00000578519 CGB2Q6NT52 195 aa11.19□□□□□ -0.62
SKA2-204ENST00000578519 AFTPHQ6ULP2 937 aa11.19□□□□□ -0.62
SKA2-204ENST00000578519 GLT6D1Q7Z4J2 308 aa11.19□□□□□ -0.62
SKA2-204ENST00000578519 TMCO2Q7Z6W1 182 aaPredicted RBP11.19□□□□□ -0.62
SKA2-204ENST00000578519 CLEC14AQ86T13 490 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms