RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-208	ENST00000578501	BUB1B	O60566	1050 aa	Predicted RBP	13.78	□□□□□ -0.2
CSNK1D-208	ENST00000578501	PRLR	P16471	622 aa		13.78	□□□□□ -0.2
CSNK1D-208	ENST00000578501	KDELR1	P24390	212 aa		13.78	□□□□□ -0.2
CSNK1D-208	ENST00000578501	SERPINA4	P29622	427 aa		13.78	□□□□□ -0.2
CSNK1D-208	ENST00000578501	CDC25B	P30305	580 aa		13.78	□□□□□ -0.2
CSNK1D-208	ENST00000578501	GJC1	P36383	396 aa		13.78	□□□□□ -0.2
CSNK1D-208	ENST00000578501	GARS	P41250	739 aa	Known RBP	13.78	□□□□□ -0.2
CSNK1D-208	ENST00000578501	RGR	P47804	291 aa		13.78	□□□□□ -0.2
CSNK1D-208	ENST00000578501	RXRG	P48443	463 aa		13.78	□□□□□ -0.2
CSNK1D-208	ENST00000578501	CCT8	P50990	548 aa		13.78	□□□□□ -0.2
CSNK1D-208	ENST00000578501	AP1S1	P61966	158 aa		13.78	□□□□□ -0.2
CSNK1D-208	ENST00000578501	SLC10A7	Q0GE19	358 aa		13.78	□□□□□ -0.2
CSNK1D-208	ENST00000578501	UGP2	Q16851	508 aa		13.78	□□□□□ -0.2
CSNK1D-208	ENST00000578501	COL28A1	Q2UY09	1125 aa		13.78	□□□□□ -0.2
CSNK1D-208	ENST00000578501	RALGPS1	Q5JS13	557 aa		13.78	□□□□□ -0.2
CSNK1D-208	ENST00000578501	ABI3BP	Q7Z7G0	1075 aa		13.78	□□□□□ -0.2
CSNK1D-208	ENST00000578501	NAXD	Q8IW45	347 aa		13.78	□□□□□ -0.2
CSNK1D-208	ENST00000578501	BBS5	Q8N3I7	341 aa		13.78	□□□□□ -0.2
CSNK1D-208	ENST00000578501	TEX26	Q8N6G2	289 aa		13.78	□□□□□ -0.2
CSNK1D-208	ENST00000578501	PQLC3	Q8N755	202 aa		13.78	□□□□□ -0.2
CSNK1D-208	ENST00000578501	NSMCE1	Q8WV22	266 aa		13.78	□□□□□ -0.2
CSNK1D-208	ENST00000578501	SPOCK2	Q92563	424 aa		13.78	□□□□□ -0.2
CSNK1D-208	ENST00000578501	ECHDC3	Q96DC8	303 aa		13.78	□□□□□ -0.2
CSNK1D-208	ENST00000578501	KLHDC7B	Q96G42	594 aa		13.78	□□□□□ -0.2
CSNK1D-208	ENST00000578501	CALR3	Q96L12	384 aa	Known RBP	13.78	□□□□□ -0.2
CSNK1D-208	ENST00000578501	TSGA13	Q96PP4	275 aa		13.78	□□□□□ -0.2
CSNK1D-208	ENST00000578501	ELF4	Q99607	663 aa	Predicted RBP	13.78	□□□□□ -0.2
CSNK1D-208	ENST00000578501	MGME1	Q9BQP7	344 aa		13.78	□□□□□ -0.2
CSNK1D-208	ENST00000578501	C1QTNF2	Q9BXJ5	285 aa		13.78	□□□□□ -0.2
CSNK1D-208	ENST00000578501	CCDC86	Q9H6F5	360 aa	Known RBP	13.78	□□□□□ -0.2
CSNK1D-208	ENST00000578501	IMPACT	Q9P2X3	320 aa		13.78	□□□□□ -0.2
CSNK1D-208	ENST00000578501	EPN1	Q9Y6I3	576 aa	Predicted RBP	13.78	□□□□□ -0.2
CSNK1D-208	ENST00000578501	PCNX2	A6NKB5	2137 aa		13.78	□□□□□ -0.2
CSNK1D-208	ENST00000578501	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	13.77	□□□□□ -0.21
CSNK1D-208	ENST00000578501	IGLON5	A6NGN9	336 aa		13.77	□□□□□ -0.21
CSNK1D-208	ENST00000578501	C3orf70	A6NLC5	250 aa	Predicted RBP	13.77	□□□□□ -0.21
CSNK1D-208	ENST00000578501	MUSK	O15146	869 aa		13.77	□□□□□ -0.21
CSNK1D-208	ENST00000578501	MFSD11	O43934	449 aa		13.77	□□□□□ -0.21
CSNK1D-208	ENST00000578501	CBFA2T3	O75081	653 aa		13.77	□□□□□ -0.21
CSNK1D-208	ENST00000578501	NDUFA10	O95299	355 aa		13.77	□□□□□ -0.21
CSNK1D-208	ENST00000578501	PIGN	O95427	931 aa		13.77	□□□□□ -0.21
CSNK1D-208	ENST00000578501	PAK4	O96013	591 aa	Predicted RBP	13.77	□□□□□ -0.21
CSNK1D-208	ENST00000578501	CR2	P20023	1033 aa		13.77	□□□□□ -0.21
CSNK1D-208	ENST00000578501	MX2	P20592	715 aa		13.77	□□□□□ -0.21
CSNK1D-208	ENST00000578501	CCNC	P24863	283 aa		13.77	□□□□□ -0.21
CSNK1D-208	ENST00000578501	NOP2	P46087	812 aa	Known RBP	13.77	□□□□□ -0.21
CSNK1D-208	ENST00000578501	SCNN1B	P51168	640 aa		13.77	□□□□□ -0.21
CSNK1D-208	ENST00000578501	ELP6	Q0PNE2	266 aa		13.77	□□□□□ -0.21
CSNK1D-208	ENST00000578501	SGCG	Q13326	291 aa		13.77	□□□□□ -0.21
CSNK1D-208	ENST00000578501	FGL2	Q14314	439 aa		13.77	□□□□□ -0.21
CSNK1D-208	ENST00000578501	ZNF235	Q14590	738 aa		13.77	□□□□□ -0.21
CSNK1D-208	ENST00000578501	TMEM52B	Q4KMG9	183 aa		13.77	□□□□□ -0.21
CSNK1D-208	ENST00000578501	ZFYVE27	Q5T4F4	411 aa		13.77	□□□□□ -0.21
CSNK1D-208	ENST00000578501	MARC1	Q5VT66	337 aa		13.77	□□□□□ -0.21
CSNK1D-208	ENST00000578501	TIGD7	Q6NT04	549 aa	Predicted RBP	13.77	□□□□□ -0.21
CSNK1D-208	ENST00000578501	GLRX5	Q86SX6	157 aa		13.77	□□□□□ -0.21
CSNK1D-208	ENST00000578501	SPATS2	Q86XZ4	545 aa	Known RBP	13.77	□□□□□ -0.21
CSNK1D-208	ENST00000578501	DCP2	Q8IU60	420 aa	Known RBP	13.77	□□□□□ -0.21
CSNK1D-208	ENST00000578501	CAMK1D	Q8IU85	385 aa		13.77	□□□□□ -0.21
CSNK1D-208	ENST00000578501	RHOT1	Q8IXI2	618 aa		13.77	□□□□□ -0.21
CSNK1D-208	ENST00000578501	DENND6B	Q8NEG7	585 aa		13.77	□□□□□ -0.21
CSNK1D-208	ENST00000578501	KLK6	Q92876	244 aa		13.77	□□□□□ -0.21
CSNK1D-208	ENST00000578501	RNF157	Q96PX1	679 aa		13.77	□□□□□ -0.21
CSNK1D-208	ENST00000578501	KLHL11	Q9NVR0	708 aa		13.77	□□□□□ -0.21
CSNK1D-208	ENST00000578501	DDX56	Q9NY93	547 aa	Known RBP	13.77	□□□□□ -0.21
CSNK1D-208	ENST00000578501	PCOLCE2	Q9UKZ9	415 aa		13.77	□□□□□ -0.21
CSNK1D-208	ENST00000578501		A0A1W2PQ67	120 aa		13.76	□□□□□ -0.21
CSNK1D-208	ENST00000578501	LRRD1	A4D1F6	860 aa		13.76	□□□□□ -0.21
CSNK1D-208	ENST00000578501	SOWAHD	A6NJG2	315 aa		13.76	□□□□□ -0.21
CSNK1D-208	ENST00000578501	TRAFD1	O14545	582 aa	Predicted RBP	13.76	□□□□□ -0.21
CSNK1D-208	ENST00000578501	KCNK3	O14649	394 aa		13.76	□□□□□ -0.21
CSNK1D-208	ENST00000578501	IPO7	O95373	1038 aa	Known RBP	13.76	□□□□□ -0.21
CSNK1D-208	ENST00000578501	COMT	P21964	271 aa		13.76	□□□□□ -0.21
CSNK1D-208	ENST00000578501	XPA	P23025	273 aa	Predicted RBP	13.76	□□□□□ -0.21
CSNK1D-208	ENST00000578501	MMP13	P45452	471 aa		13.76	□□□□□ -0.21
CSNK1D-208	ENST00000578501	ARRB1	P49407	418 aa	Predicted RBP	13.76	□□□□□ -0.21
CSNK1D-208	ENST00000578501	POLR2L	P62875	67 aa	Known RBP	13.76	□□□□□ -0.21
CSNK1D-208	ENST00000578501	BCL2L1	Q07817	233 aa		13.76	□□□□□ -0.21
CSNK1D-208	ENST00000578501	IFI16	Q16666	785 aa	Known RBP	13.76	□□□□□ -0.21
CSNK1D-208	ENST00000578501	CFAP58	Q5T655	872 aa		13.76	□□□□□ -0.21
CSNK1D-208	ENST00000578501	KYAT3	Q6YP21	454 aa	Known RBP	13.76	□□□□□ -0.21
CSNK1D-208	ENST00000578501	GCNT7	Q6ZNI0	430 aa		13.76	□□□□□ -0.21
CSNK1D-208	ENST00000578501	PGBD5	Q8N414	524 aa		13.76	□□□□□ -0.21
CSNK1D-208	ENST00000578501	MAML1	Q92585	1016 aa		13.76	□□□□□ -0.21
CSNK1D-208	ENST00000578501	BMF	Q96LC9	184 aa		13.76	□□□□□ -0.21
CSNK1D-208	ENST00000578501	CAMK1G	Q96NX5	476 aa		13.76	□□□□□ -0.21
CSNK1D-208	ENST00000578501	NUDCD1	Q96RS6	583 aa		13.76	□□□□□ -0.21
CSNK1D-208	ENST00000578501	KLF6	Q99612	283 aa	Predicted RBP	13.76	□□□□□ -0.21
CSNK1D-208	ENST00000578501	C1QTNF7	Q9BXJ2	289 aa		13.76	□□□□□ -0.21
CSNK1D-208	ENST00000578501	FZD3	Q9NPG1	666 aa		13.76	□□□□□ -0.21
CSNK1D-208	ENST00000578501	PCDH12	Q9NPG4	1184 aa		13.76	□□□□□ -0.21
CSNK1D-208	ENST00000578501	GPR27	Q9NS67	375 aa		13.76	□□□□□ -0.21
CSNK1D-208	ENST00000578501	HAUS2	Q9NVX0	235 aa		13.76	□□□□□ -0.21
CSNK1D-208	ENST00000578501	AMACR	Q9UHK6	382 aa		13.76	□□□□□ -0.21
CSNK1D-208	ENST00000578501	GGT7	Q9UJ14	662 aa		13.76	□□□□□ -0.21
CSNK1D-208	ENST00000578501	ITM2B	Q9Y287	266 aa		13.76	□□□□□ -0.21
CSNK1D-208	ENST00000578501	PCDHB9	Q9Y5E1	797 aa		13.76	□□□□□ -0.21
CSNK1D-208	ENST00000578501	ALG6	Q9Y672	507 aa		13.76	□□□□□ -0.21
CSNK1D-208	ENST00000578501	CFAP69	A5D8W1	941 aa		13.75	□□□□□ -0.21
CSNK1D-208	ENST00000578501		A6NNZ2	444 aa		13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms