RNA–Protein interactions for RNA: ENST00000577897.1

SREBF1-217, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-217ENST00000577897 RBM15Q96T37 977 aaKnown RBP eCLIP14.27□□□□□ -0.135e-9■■□□□ 11.5
SREBF1-217ENST00000577897 CNOT10Q9H9A5 744 aaKnown RBP14.27□□□□□ -0.13
SREBF1-217ENST00000577897 CD248Q9HCU0 757 aa14.27□□□□□ -0.13
SREBF1-217ENST00000577897 DNAJC17Q9NVM6 304 aaKnown RBP14.27□□□□□ -0.13
SREBF1-217ENST00000577897 GPATCH2LQ9NWQ4 482 aa14.27□□□□□ -0.13
SREBF1-217ENST00000577897 WSB2Q9NYS7 404 aaPredicted RBP14.27□□□□□ -0.13
SREBF1-217ENST00000577897 COX16Q9P0S2 106 aa14.27□□□□□ -0.13
SREBF1-217ENST00000577897 GMIPQ9P107 970 aa14.27□□□□□ -0.13
SREBF1-217ENST00000577897 EIF2B4Q9UI10 523 aaKnown RBP14.27□□□□□ -0.13
SREBF1-217ENST00000577897 SCML2Q9UQR0 700 aa14.27□□□□□ -0.13
SREBF1-217ENST00000577897 SH3BP1Q9Y3L3 701 aa14.27□□□□□ -0.13
SREBF1-217ENST00000577897 TEP1Q99973 2627 aaKnown RBP14.27□□□□□ -0.13
SREBF1-217ENST00000577897 A0A087WUV0 522 aaPredicted RBP14.26□□□□□ -0.13
SREBF1-217ENST00000577897 HOXC11O43248 304 aaPredicted RBP14.26□□□□□ -0.13
SREBF1-217ENST00000577897 CREB3O43889 395 aa14.26□□□□□ -0.13
SREBF1-217ENST00000577897 OAS1P00973 400 aaKnown RBP14.26□□□□□ -0.13
SREBF1-217ENST00000577897 AGTP01019 485 aa14.26□□□□□ -0.13
SREBF1-217ENST00000577897 JUPP14923 745 aa14.26□□□□□ -0.13
SREBF1-217ENST00000577897 PECAM1P16284 738 aaPredicted RBP14.26□□□□□ -0.13
SREBF1-217ENST00000577897 IL4RP24394 825 aa14.26□□□□□ -0.13
SREBF1-217ENST00000577897 CCR1P32246 355 aa14.26□□□□□ -0.13
SREBF1-217ENST00000577897 HNF1BP35680 557 aa14.26□□□□□ -0.13
SREBF1-217ENST00000577897 FDFT1P37268 417 aa14.26□□□□□ -0.13
SREBF1-217ENST00000577897 MAGEA4P43358 317 aa14.26□□□□□ -0.13
SREBF1-217ENST00000577897 CXCR3P49682 368 aa14.26□□□□□ -0.13
SREBF1-217ENST00000577897 BASP1P80723 227 aaKnown RBP14.26□□□□□ -0.13
SREBF1-217ENST00000577897 ZNF844Q08AG5 666 aa14.26□□□□□ -0.13
SREBF1-217ENST00000577897 PTPRNQ16849 979 aa14.26□□□□□ -0.13
SREBF1-217ENST00000577897 RNASEH2BQ5TBB1 312 aaKnown RBP14.26□□□□□ -0.13
SREBF1-217ENST00000577897 SYPL2Q5VXT5 272 aa14.26□□□□□ -0.13
SREBF1-217ENST00000577897 LEKR1Q6ZMV7 388 aa14.26□□□□□ -0.13
SREBF1-217ENST00000577897 TMPRSS12Q86WS5 348 aa14.26□□□□□ -0.13
SREBF1-217ENST00000577897 BBS7Q8IWZ6 715 aa14.26□□□□□ -0.13
SREBF1-217ENST00000577897 RIBC1Q8N443 379 aaPredicted RBP14.26□□□□□ -0.13
SREBF1-217ENST00000577897 PQLC3Q8N755 202 aa14.26□□□□□ -0.13
SREBF1-217ENST00000577897 PGM2Q96G03 612 aa14.26□□□□□ -0.13
SREBF1-217ENST00000577897 SERPINB12Q96P63 405 aa14.26□□□□□ -0.13
SREBF1-217ENST00000577897 HAPLN3Q96S86 360 aa14.26□□□□□ -0.13
SREBF1-217ENST00000577897 GABRG3Q99928 467 aa14.26□□□□□ -0.13
SREBF1-217ENST00000577897 OSBPL2Q9H1P3 480 aa14.26□□□□□ -0.13
SREBF1-217ENST00000577897 CDC42EP4Q9H3Q1 356 aaKnown RBP14.26□□□□□ -0.13
SREBF1-217ENST00000577897 SPHK2Q9NRA0 654 aa14.26□□□□□ -0.13
SREBF1-217ENST00000577897 CWC15Q9P013 229 aaKnown RBP14.26□□□□□ -0.13
SREBF1-217ENST00000577897 STARD13Q9Y3M8 1113 aa14.26□□□□□ -0.13
SREBF1-217ENST00000577897 NFS1Q9Y697 457 aa14.26□□□□□ -0.13
SREBF1-217ENST00000577897 CABIN1Q9Y6J0 2220 aa14.26□□□□□ -0.13
SREBF1-217ENST00000577897 MYO9AB2RTY4 2548 aa14.25□□□□□ -0.13
SREBF1-217ENST00000577897 SPTAN1Q13813 2472 aaKnown RBP14.25□□□□□ -0.13
SREBF1-217ENST00000577897 E2F8A0AVK6 867 aa14.25□□□□□ -0.13
SREBF1-217ENST00000577897 WASH3PC4AMC7 463 aa14.25□□□□□ -0.13
SREBF1-217ENST00000577897 E7EVH7 732 aa14.25□□□□□ -0.13
SREBF1-217ENST00000577897 SPAG6O75602 509 aa14.25□□□□□ -0.13
SREBF1-217ENST00000577897 IRF1P10914 325 aa14.25□□□□□ -0.13
SREBF1-217ENST00000577897 NR1D1P20393 614 aa14.25□□□□□ -0.13
SREBF1-217ENST00000577897 YWHAQP27348 245 aa14.25□□□□□ -0.13
SREBF1-217ENST00000577897 RPL22P35268 128 aaKnown RBP14.25□□□□□ -0.13
SREBF1-217ENST00000577897 GRK6P43250 576 aa14.25□□□□□ -0.13
SREBF1-217ENST00000577897 CSNK1EP49674 416 aaKnown RBP14.25□□□□□ -0.13
SREBF1-217ENST00000577897 IL9RQ01113 521 aa14.25□□□□□ -0.13
SREBF1-217ENST00000577897 TAF10Q12962 218 aa14.25□□□□□ -0.13
SREBF1-217ENST00000577897 PAFAH1B3Q15102 231 aaKnown RBP14.25□□□□□ -0.13
SREBF1-217ENST00000577897 CA9Q16790 459 aa14.25□□□□□ -0.13
SREBF1-217ENST00000577897 DNAJC21Q5F1R6 531 aaKnown RBP14.25□□□□□ -0.13
SREBF1-217ENST00000577897 ARHGEF18Q6ZSZ5 1173 aa14.25□□□□□ -0.13
SREBF1-217ENST00000577897 RFX8Q6ZV50 586 aa14.25□□□□□ -0.13
SREBF1-217ENST00000577897 CACUL1Q86Y37 369 aa14.25□□□□□ -0.13
SREBF1-217ENST00000577897 TMEM25Q86YD3 366 aa14.25□□□□□ -0.13
SREBF1-217ENST00000577897 UNC45BQ8IWX7 931 aa14.25□□□□□ -0.13
SREBF1-217ENST00000577897 LZTR1Q8N653 840 aa14.25□□□□□ -0.13
SREBF1-217ENST00000577897 OTUB2Q96DC9 234 aa14.25□□□□□ -0.13
SREBF1-217ENST00000577897 QKIQ96PU8 341 aaKnown RBP eCLIP14.25□□□□□ -0.13
SREBF1-217ENST00000577897 TTLL2Q9BWV7 592 aa14.25□□□□□ -0.13
SREBF1-217ENST00000577897 CATSPERBQ9H7T0 1116 aa14.25□□□□□ -0.13
SREBF1-217ENST00000577897 SAYSD1Q9NPB0 183 aa14.25□□□□□ -0.13
SREBF1-217ENST00000577897 TLR8Q9NR97 1041 aaKnown RBP14.25□□□□□ -0.13
SREBF1-217ENST00000577897 PIGVQ9NUD9 493 aa14.25□□□□□ -0.13
SREBF1-217ENST00000577897 SAE1Q9UBE0 346 aaPredicted RBP14.25□□□□□ -0.13
SREBF1-217ENST00000577897 FTSJ1Q9UET6 329 aa14.25□□□□□ -0.13
SREBF1-217ENST00000577897 SNX11Q9Y5W9 270 aa14.25□□□□□ -0.13
SREBF1-217ENST00000577897 KNL1Q8NG31 2342 aa14.25□□□□□ -0.13
SREBF1-217ENST00000577897 DOPEY2Q9Y3R5 2298 aa14.24□□□□□ -0.13
SREBF1-217ENST00000577897 C5orf60A6NFR6 353 aa14.24□□□□□ -0.13
SREBF1-217ENST00000577897 PRRT4C9JH25 899 aa14.24□□□□□ -0.13
SREBF1-217ENST00000577897 NEDD8-MDP1E9PL57 170 aa14.24□□□□□ -0.13
SREBF1-217ENST00000577897 ERVH48-1M5A8F1 160 aa14.24□□□□□ -0.13
SREBF1-217ENST00000577897 FGF10O15520 208 aaPredicted RBP14.24□□□□□ -0.13
SREBF1-217ENST00000577897 GCATO75600 419 aa14.24□□□□□ -0.13
SREBF1-217ENST00000577897 TCEA3O75764 348 aa14.24□□□□□ -0.13
SREBF1-217ENST00000577897 GOT1P17174 413 aa14.24□□□□□ -0.13
SREBF1-217ENST00000577897 TFE3P19532 575 aaPredicted RBP14.24□□□□□ -0.13
SREBF1-217ENST00000577897 AMPD1P23109 780 aa14.24□□□□□ -0.13
SREBF1-217ENST00000577897 PPP3CCP48454 512 aa14.24□□□□□ -0.13
SREBF1-217ENST00000577897 LMAN1P49257 510 aa14.24□□□□□ -0.13
SREBF1-217ENST00000577897 CDK16Q00536 496 aa14.24□□□□□ -0.13
SREBF1-217ENST00000577897 STARD3Q14849 445 aa14.24□□□□□ -0.13
SREBF1-217ENST00000577897 KIF19Q2TAC6 998 aa14.24□□□□□ -0.13
SREBF1-217ENST00000577897 KDM7AQ6ZMT4 941 aa14.24□□□□□ -0.13
SREBF1-217ENST00000577897 GPRIN1Q7Z2K8 1008 aa14.24□□□□□ -0.13
SREBF1-217ENST00000577897 ATP11CQ8NB49 1132 aa14.24□□□□□ -0.13
SREBF1-217ENST00000577897 CADM4Q8NFZ8 388 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms