RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 PYGMP11217 842 aa12.83□□□□□ -0.36
CDK5RAP3-203ENST00000577442 MSNP26038 577 aaKnown RBP12.83□□□□□ -0.36
CDK5RAP3-203ENST00000577442 AFF3P51826 1226 aaKnown RBP12.83□□□□□ -0.36
CDK5RAP3-203ENST00000577442 MAXP61244 160 aa12.83□□□□□ -0.36
CDK5RAP3-203ENST00000577442 PPP2CBP62714 309 aa12.83□□□□□ -0.36
CDK5RAP3-203ENST00000577442 RPS21P63220 83 aaKnown RBP12.83□□□□□ -0.36
CDK5RAP3-203ENST00000577442 PPP2CAP67775 309 aa12.83□□□□□ -0.36
CDK5RAP3-203ENST00000577442 NOMO1Q15155 1222 aa12.83□□□□□ -0.36
CDK5RAP3-203ENST00000577442 AASDHQ4L235 1098 aaPredicted RBP12.83□□□□□ -0.36
CDK5RAP3-203ENST00000577442 SLC45A4Q5BKX6 768 aa12.83□□□□□ -0.36
CDK5RAP3-203ENST00000577442 NAPEPLDQ6IQ20 393 aa12.83□□□□□ -0.36
CDK5RAP3-203ENST00000577442 SLC23A3Q6PIS1 610 aa12.83□□□□□ -0.36
CDK5RAP3-203ENST00000577442 TTC7BQ86TV6 843 aa12.83□□□□□ -0.36
CDK5RAP3-203ENST00000577442 CDKL3Q8IVW4 592 aaPredicted RBP12.83□□□□□ -0.36
CDK5RAP3-203ENST00000577442 PGBD5Q8N414 524 aa12.83□□□□□ -0.36
CDK5RAP3-203ENST00000577442 TTC13Q8NBP0 860 aa12.83□□□□□ -0.36
CDK5RAP3-203ENST00000577442 SPOCK2Q92563 424 aa12.83□□□□□ -0.36
CDK5RAP3-203ENST00000577442 VOPP1Q96AW1 172 aa12.83□□□□□ -0.36
CDK5RAP3-203ENST00000577442 SKA1Q96BD8 255 aa12.83□□□□□ -0.36
CDK5RAP3-203ENST00000577442 HAUS1Q96CS2 278 aa12.83□□□□□ -0.36
CDK5RAP3-203ENST00000577442 ECHDC3Q96DC8 303 aa12.83□□□□□ -0.36
CDK5RAP3-203ENST00000577442 QKIQ96PU8 341 aaKnown RBP eCLIP12.83□□□□□ -0.36
CDK5RAP3-203ENST00000577442 SEMA3CQ99985 751 aa12.83□□□□□ -0.36
CDK5RAP3-203ENST00000577442 CARD9Q9H257 536 aa12.83□□□□□ -0.36
CDK5RAP3-203ENST00000577442 NOD2Q9HC29 1040 aa12.83□□□□□ -0.36
CDK5RAP3-203ENST00000577442 PARD6AQ9NPB6 346 aa12.83□□□□□ -0.36
CDK5RAP3-203ENST00000577442 TMEM74BQ9NUR3 256 aa12.83□□□□□ -0.36
CDK5RAP3-203ENST00000577442 SEPT10Q9P0V9 454 aa12.83□□□□□ -0.36
CDK5RAP3-203ENST00000577442 SLC6A14Q9UN76 642 aa12.83□□□□□ -0.36
CDK5RAP3-203ENST00000577442 ATP8A1Q9Y2Q0 1164 aa12.83□□□□□ -0.36
CDK5RAP3-203ENST00000577442 CFAP54Q96N23 3096 aa12.82□□□□□ -0.36
CDK5RAP3-203ENST00000577442 A0A1W2PQU0 124 aa12.82□□□□□ -0.36
CDK5RAP3-203ENST00000577442 H7C0C1 242 aa12.82□□□□□ -0.36
CDK5RAP3-203ENST00000577442 AREL1O15033 823 aa12.82□□□□□ -0.36
CDK5RAP3-203ENST00000577442 HTRA2O43464 458 aaPredicted RBP12.82□□□□□ -0.36
CDK5RAP3-203ENST00000577442 SYPP08247 313 aa12.82□□□□□ -0.36
CDK5RAP3-203ENST00000577442 TIMP2P16035 220 aa12.82□□□□□ -0.36
CDK5RAP3-203ENST00000577442 TGM1P22735 817 aa12.82□□□□□ -0.36
CDK5RAP3-203ENST00000577442 MAOBP27338 520 aa12.82□□□□□ -0.36
CDK5RAP3-203ENST00000577442 ABL2P42684 1182 aa12.82□□□□□ -0.36
CDK5RAP3-203ENST00000577442 ATP5OP48047 213 aa12.82□□□□□ -0.36
CDK5RAP3-203ENST00000577442 GRIA4P48058 902 aa12.82□□□□□ -0.36
CDK5RAP3-203ENST00000577442 RACK1P63244 317 aaKnown RBP12.82□□□□□ -0.36
CDK5RAP3-203ENST00000577442 ARHGAP8P85298 464 aa12.82□□□□□ -0.36
CDK5RAP3-203ENST00000577442 ADCY2Q08462 1091 aa12.82□□□□□ -0.36
CDK5RAP3-203ENST00000577442 ZNF211Q13398 564 aaPredicted RBP12.82□□□□□ -0.36
CDK5RAP3-203ENST00000577442 CCDC6Q16204 474 aa12.82□□□□□ -0.36
CDK5RAP3-203ENST00000577442 UGP2Q16851 508 aa12.82□□□□□ -0.36
CDK5RAP3-203ENST00000577442 MEI1Q5TIA1 1274 aa12.82□□□□□ -0.36
CDK5RAP3-203ENST00000577442 ADAT2Q7Z6V5 191 aaKnown RBP12.82□□□□□ -0.36
CDK5RAP3-203ENST00000577442 ZC3H18Q86VM9 953 aaKnown RBP12.82□□□□□ -0.36
CDK5RAP3-203ENST00000577442 NDUFAF2Q8N183 169 aa12.82□□□□□ -0.36
CDK5RAP3-203ENST00000577442 ACTL9Q8TC94 416 aa12.82□□□□□ -0.36
CDK5RAP3-203ENST00000577442 CXorf40AQ8TE69 158 aa12.82□□□□□ -0.36
CDK5RAP3-203ENST00000577442 VAT1Q99536 393 aa12.82□□□□□ -0.36
CDK5RAP3-203ENST00000577442 ZDHHC5Q9C0B5 715 aa12.82□□□□□ -0.36
CDK5RAP3-203ENST00000577442 CAPN10Q9HC96 672 aa12.82□□□□□ -0.36
CDK5RAP3-203ENST00000577442 SAE1Q9UBE0 346 aaPredicted RBP12.82□□□□□ -0.36
CDK5RAP3-203ENST00000577442 PLXNA2O75051 1894 aa12.81□□□□□ -0.36
CDK5RAP3-203ENST00000577442 TRAFD1O14545 582 aaPredicted RBP12.81□□□□□ -0.36
CDK5RAP3-203ENST00000577442 STK10O94804 968 aaKnown RBP12.81□□□□□ -0.36
CDK5RAP3-203ENST00000577442 CPP00450 1065 aa12.81□□□□□ -0.36
CDK5RAP3-203ENST00000577442 MAT2AP31153 395 aaKnown RBP12.81□□□□□ -0.36
CDK5RAP3-203ENST00000577442 AKT2P31751 481 aa12.81□□□□□ -0.36
CDK5RAP3-203ENST00000577442 ATXN3P54252 364 aaPredicted RBP12.81□□□□□ -0.36
CDK5RAP3-203ENST00000577442 OTUD4Q01804 1114 aaKnown RBP12.81□□□□□ -0.36
CDK5RAP3-203ENST00000577442 DSC2Q02487 901 aa12.81□□□□□ -0.36
CDK5RAP3-203ENST00000577442 ZBTB17Q13105 803 aa12.81□□□□□ -0.36
CDK5RAP3-203ENST00000577442 SF3A2Q15428 464 aaKnown RBP12.81□□□□□ -0.36
CDK5RAP3-203ENST00000577442 SLC14A2Q15849 920 aa12.81□□□□□ -0.36
CDK5RAP3-203ENST00000577442 TMEM259Q4ZIN3 620 aa12.81□□□□□ -0.36
CDK5RAP3-203ENST00000577442 TEX44Q53QW1 395 aa12.81□□□□□ -0.36
CDK5RAP3-203ENST00000577442 ARMC12Q5T9G4 340 aa12.81□□□□□ -0.36
CDK5RAP3-203ENST00000577442 KIAA2013Q8IYS2 634 aa12.81□□□□□ -0.36
CDK5RAP3-203ENST00000577442 C1orf216Q8TAB5 229 aa12.81□□□□□ -0.36
CDK5RAP3-203ENST00000577442 PDCD6IPQ8WUM4 868 aaKnown RBP12.81□□□□□ -0.36
CDK5RAP3-203ENST00000577442 LRRN4Q8WUT4 740 aa12.81□□□□□ -0.36
CDK5RAP3-203ENST00000577442 SERAC1Q96JX3 654 aa12.81□□□□□ -0.36
CDK5RAP3-203ENST00000577442 C1QTNF7Q9BXJ2 289 aa12.81□□□□□ -0.36
CDK5RAP3-203ENST00000577442 SMOC1Q9H4F8 434 aa12.81□□□□□ -0.36
CDK5RAP3-203ENST00000577442 TM9SF3Q9HD45 589 aa12.81□□□□□ -0.36
CDK5RAP3-203ENST00000577442 PCDH12Q9NPG4 1184 aa12.81□□□□□ -0.36
CDK5RAP3-203ENST00000577442 AASDHPPTQ9NRN7 309 aa12.81□□□□□ -0.36
CDK5RAP3-203ENST00000577442 RAI2Q9Y5P3 530 aa12.81□□□□□ -0.36
CDK5RAP3-203ENST00000577442 PCDH15Q96QU1 1955 aa12.8□□□□□ -0.36
CDK5RAP3-203ENST00000577442 LNP1A1A4G5 178 aa12.8□□□□□ -0.36
CDK5RAP3-203ENST00000577442 PATE3B3GLJ2 98 aa12.8□□□□□ -0.36
CDK5RAP3-203ENST00000577442 PRAMEF26H0Y7S4 382 aa12.8□□□□□ -0.36
CDK5RAP3-203ENST00000577442 KCNK3O14649 394 aa12.8□□□□□ -0.36
CDK5RAP3-203ENST00000577442 KIF5CO60282 957 aa12.8□□□□□ -0.36
CDK5RAP3-203ENST00000577442 MAGEC1O60732 1142 aa12.8□□□□□ -0.36
CDK5RAP3-203ENST00000577442 GJB3O75712 270 aa12.8□□□□□ -0.36
CDK5RAP3-203ENST00000577442 PGLSO95336 258 aa12.8□□□□□ -0.36
CDK5RAP3-203ENST00000577442 RBP3P10745 1247 aa12.8□□□□□ -0.36
CDK5RAP3-203ENST00000577442 CYP2A6P11509 494 aaPredicted RBP12.8□□□□□ -0.36
CDK5RAP3-203ENST00000577442 HNRNPA2B1P22626 353 aaKnown RBP12.8□□□□□ -0.36
CDK5RAP3-203ENST00000577442 PTPN3P26045 913 aa12.8□□□□□ -0.36
CDK5RAP3-203ENST00000577442 MMP12P39900 470 aa12.8□□□□□ -0.36
CDK5RAP3-203ENST00000577442 EIF3EP60228 445 aaKnown RBP12.8□□□□□ -0.36
CDK5RAP3-203ENST00000577442 RPL26P61254 145 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms