RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 EFHC2Q5JST6 749 aa16.45■□□□□ 0.22
CTDNEP1-211ENST00000575783 BRMS1LQ5PSV4 323 aa16.45■□□□□ 0.22
CTDNEP1-211ENST00000575783 KCTD16Q68DU8 428 aa16.45■□□□□ 0.22
CTDNEP1-211ENST00000575783 OGFOD3Q6PK18 319 aa16.45■□□□□ 0.22
CTDNEP1-211ENST00000575783 ZNF783Q6ZMS7 281 aa16.45■□□□□ 0.22
CTDNEP1-211ENST00000575783 LEKR1Q6ZMV7 388 aa16.45■□□□□ 0.22
CTDNEP1-211ENST00000575783 C11orf57Q6ZUT1 292 aaPredicted RBP16.45■□□□□ 0.22
CTDNEP1-211ENST00000575783 PASD1Q8IV76 773 aa16.45■□□□□ 0.22
CTDNEP1-211ENST00000575783 DRC7Q8IY82 874 aa16.45■□□□□ 0.22
CTDNEP1-211ENST00000575783 GPBAR1Q8TDU6 330 aa16.45■□□□□ 0.22
CTDNEP1-211ENST00000575783 APOOQ9BUR5 198 aa16.45■□□□□ 0.22
CTDNEP1-211ENST00000575783 DPEP2Q9H4A9 486 aa16.45■□□□□ 0.22
CTDNEP1-211ENST00000575783 IGSF5Q9NSI5 407 aa16.45■□□□□ 0.22
CTDNEP1-211ENST00000575783 DAAM1Q9Y4D1 1078 aa16.45■□□□□ 0.22
CTDNEP1-211ENST00000575783 SPTBN1Q01082 2364 aaKnown RBP16.45■□□□□ 0.22
CTDNEP1-211ENST00000575783 CENPEQ02224 2701 aa16.45■□□□□ 0.22
CTDNEP1-211ENST00000575783 PMM2O15305 246 aa16.44■□□□□ 0.22
CTDNEP1-211ENST00000575783 B4GAT1O43505 415 aa16.44■□□□□ 0.22
CTDNEP1-211ENST00000575783 DAB1O75553 588 aa16.44■□□□□ 0.22
CTDNEP1-211ENST00000575783 POP4O95707 220 aaKnown RBP16.44■□□□□ 0.22
CTDNEP1-211ENST00000575783 CPNE6O95741 557 aa16.44■□□□□ 0.22
CTDNEP1-211ENST00000575783 ALDH4A1P30038 563 aa16.44■□□□□ 0.22
CTDNEP1-211ENST00000575783 ACVRL1P37023 503 aa16.44■□□□□ 0.22
CTDNEP1-211ENST00000575783 MLLT10P55197 1068 aa16.44■□□□□ 0.22
CTDNEP1-211ENST00000575783 OR1D5P58170 312 aa16.44■□□□□ 0.22
CTDNEP1-211ENST00000575783 B4GALNT1Q00973 533 aa16.44■□□□□ 0.22
CTDNEP1-211ENST00000575783 POLD3Q15054 466 aaPredicted RBP16.44■□□□□ 0.22
CTDNEP1-211ENST00000575783 WSCD2Q2TBF2 565 aa16.44■□□□□ 0.22
CTDNEP1-211ENST00000575783 CCDC40Q4G0X9 1142 aa16.44■□□□□ 0.22
CTDNEP1-211ENST00000575783 OTUD1Q5VV17 481 aaPredicted RBP16.44■□□□□ 0.22
CTDNEP1-211ENST00000575783 GDPD4Q6W3E5 623 aa16.44■□□□□ 0.22
CTDNEP1-211ENST00000575783 PLPP6Q8IY26 295 aa16.44■□□□□ 0.22
CTDNEP1-211ENST00000575783 ISG20Q96AZ6 181 aaKnown RBP16.44■□□□□ 0.22
CTDNEP1-211ENST00000575783 PDXPQ96GD0 296 aa16.44■□□□□ 0.22
CTDNEP1-211ENST00000575783 C1orf74Q96LT6 269 aa16.44■□□□□ 0.22
CTDNEP1-211ENST00000575783 RBM15Q96T37 977 aaKnown RBP eCLIP16.44■□□□□ 0.22
CTDNEP1-211ENST00000575783 OSBPL1AQ9BXW6 950 aa16.44■□□□□ 0.22
CTDNEP1-211ENST00000575783 CDH19Q9H159 772 aa16.44■□□□□ 0.22
CTDNEP1-211ENST00000575783 UBE2TQ9NPD8 197 aaPredicted RBP16.44■□□□□ 0.22
CTDNEP1-211ENST00000575783 B3GALT1Q9Y5Z6 326 aa16.44■□□□□ 0.22
CTDNEP1-211ENST00000575783 IGLV3-10A0A075B6K4 115 aa16.43■□□□□ 0.22
CTDNEP1-211ENST00000575783 PRR19A6NJB7 356 aa16.43■□□□□ 0.22
CTDNEP1-211ENST00000575783 KRT7P08729 469 aa16.43■□□□□ 0.22
CTDNEP1-211ENST00000575783 USP8P40818 1118 aa16.43■□□□□ 0.22
CTDNEP1-211ENST00000575783 SULT1E1P49888 294 aa16.43■□□□□ 0.22
CTDNEP1-211ENST00000575783 SNRPD1P62314 119 aaKnown RBP16.43■□□□□ 0.22
CTDNEP1-211ENST00000575783 SLC6A3Q01959 620 aa16.43■□□□□ 0.22
CTDNEP1-211ENST00000575783 DEUP1Q05D60 604 aa16.43■□□□□ 0.22
CTDNEP1-211ENST00000575783 KLRB1Q12918 225 aa16.43■□□□□ 0.22
CTDNEP1-211ENST00000575783 HLTFQ14527 1009 aaKnown RBP eCLIP16.43■□□□□ 0.22
CTDNEP1-211ENST00000575783 ARHGAP44Q17R89 818 aa16.43■□□□□ 0.22
CTDNEP1-211ENST00000575783 DEFB109BQ30KR1 87 aa16.43■□□□□ 0.22
CTDNEP1-211ENST00000575783 LACTB2Q53H82 288 aaPredicted RBP16.43■□□□□ 0.22
CTDNEP1-211ENST00000575783 ATXN7L2Q5T6C5 722 aaPredicted RBP16.43■□□□□ 0.22
CTDNEP1-211ENST00000575783 OLFML1Q6UWY5 402 aa16.43■□□□□ 0.22
CTDNEP1-211ENST00000575783 IRF2BP1Q8IU81 584 aa16.43■□□□□ 0.22
CTDNEP1-211ENST00000575783 OR2AP1Q8NGE2 309 aa16.43■□□□□ 0.22
CTDNEP1-211ENST00000575783 ATL2Q8NHH9 583 aa16.43■□□□□ 0.22
CTDNEP1-211ENST00000575783 ART4Q93070 314 aa16.43■□□□□ 0.22
CTDNEP1-211ENST00000575783 SPATA32Q96LK8 384 aa16.43■□□□□ 0.22
CTDNEP1-211ENST00000575783 WDR92Q96MX6 357 aa16.43■□□□□ 0.22
CTDNEP1-211ENST00000575783 NUDT22Q9BRQ3 303 aa16.43■□□□□ 0.22
CTDNEP1-211ENST00000575783 SYNCQ9H7C4 482 aa16.43■□□□□ 0.22
CTDNEP1-211ENST00000575783 PCDHGA3Q9Y5H0 932 aa16.43■□□□□ 0.22
CTDNEP1-211ENST00000575783 IGHV5-10-1A0A0J9YXX1 117 aa16.42■□□□□ 0.22
CTDNEP1-211ENST00000575783 P4HA2O15460 535 aa16.42■□□□□ 0.22
CTDNEP1-211ENST00000575783 NUDT21O43809 227 aaKnown RBP16.42■□□□□ 0.22
CTDNEP1-211ENST00000575783 DUX1O43812 170 aa16.42■□□□□ 0.22
CTDNEP1-211ENST00000575783 RAD1O60671 282 aa16.42■□□□□ 0.22
CTDNEP1-211ENST00000575783 ERBB2P04626 1255 aa16.42■□□□□ 0.22
CTDNEP1-211ENST00000575783 PCCBP05166 539 aa16.42■□□□□ 0.22
CTDNEP1-211ENST00000575783 TIMP2P16035 220 aa16.42■□□□□ 0.22
CTDNEP1-211ENST00000575783 XPAP23025 273 aaPredicted RBP16.42■□□□□ 0.22
CTDNEP1-211ENST00000575783 CD97P48960 835 aa16.42■□□□□ 0.22
CTDNEP1-211ENST00000575783 LRRC63Q05C16 580 aa16.42■□□□□ 0.22
CTDNEP1-211ENST00000575783 PKP1Q13835 747 aa16.42■□□□□ 0.22
CTDNEP1-211ENST00000575783 SPECC1LQ69YQ0 1117 aa16.42■□□□□ 0.22
CTDNEP1-211ENST00000575783 SPATA20Q8TB22 786 aa16.42■□□□□ 0.22
CTDNEP1-211ENST00000575783 APOBEC4Q8WW27 367 aaKnown RBP16.42■□□□□ 0.22
CTDNEP1-211ENST00000575783 OR1E3Q8WZA6 343 aa16.42■□□□□ 0.22
CTDNEP1-211ENST00000575783 VOPP1Q96AW1 172 aa16.42■□□□□ 0.22
CTDNEP1-211ENST00000575783 CCDC74BQ96LY2 380 aa16.42■□□□□ 0.22
CTDNEP1-211ENST00000575783 NPY6RQ99463 290 aa16.42■□□□□ 0.22
CTDNEP1-211ENST00000575783 ZYG11BQ9C0D3 744 aa16.42■□□□□ 0.22
CTDNEP1-211ENST00000575783 INTS2Q9H0H0 1204 aaKnown RBP16.42■□□□□ 0.22
CTDNEP1-211ENST00000575783 MRPL40Q9NQ50 206 aaKnown RBP16.42■□□□□ 0.22
CTDNEP1-211ENST00000575783 RMND1Q9NWS8 449 aa16.42■□□□□ 0.22
CTDNEP1-211ENST00000575783 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.42■□□□□ 0.22
CTDNEP1-211ENST00000575783 ZNF212Q9UDV6 495 aa16.42■□□□□ 0.22
CTDNEP1-211ENST00000575783 ANKRD17O75179 2603 aaKnown RBP16.42■□□□□ 0.22
CTDNEP1-211ENST00000575783 SCN8AQ9UQD0 1980 aa16.42■□□□□ 0.22
CTDNEP1-211ENST00000575783 UNC13CQ8NB66 2214 aa16.41■□□□□ 0.22
CTDNEP1-211ENST00000575783 FAM237AA0A1B0GTK4 181 aa16.41■□□□□ 0.22
CTDNEP1-211ENST00000575783 RHPN2P1A8MT19 583 aa16.41■□□□□ 0.22
CTDNEP1-211ENST00000575783 HGSO14964 777 aaPredicted RBP16.41■□□□□ 0.22
CTDNEP1-211ENST00000575783 CAPN5O15484 640 aaPredicted RBP16.41■□□□□ 0.22
CTDNEP1-211ENST00000575783 ZNF202O95125 648 aa16.41■□□□□ 0.22
CTDNEP1-211ENST00000575783 GSRP00390 522 aa16.41■□□□□ 0.22
CTDNEP1-211ENST00000575783 UQCRFS1P47985 274 aa16.41■□□□□ 0.22
CTDNEP1-211ENST00000575783 PNOCQ13519 176 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms