RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 TMEM145Q8NBT3 493 aa20.9■□□□□ 0.94
HCFC1R1-208ENST00000575214 CXorf40AQ8TE69 158 aa20.9■□□□□ 0.94
HCFC1R1-208ENST00000575214 LRRN4Q8WUT4 740 aa20.9■□□□□ 0.94
HCFC1R1-208ENST00000575214 HDAC11Q96DB2 347 aa20.9■□□□□ 0.94
HCFC1R1-208ENST00000575214 TSGA13Q96PP4 275 aa20.9■□□□□ 0.94
HCFC1R1-208ENST00000575214 NUDCD1Q96RS6 583 aa20.9■□□□□ 0.94
HCFC1R1-208ENST00000575214 GDF3Q9NR23 364 aa20.9■□□□□ 0.94
HCFC1R1-208ENST00000575214 TM7SF3Q9NS93 570 aa20.9■□□□□ 0.94
HCFC1R1-208ENST00000575214 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.9■□□□□ 0.94
HCFC1R1-208ENST00000575214 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.89■□□□□ 0.93
HCFC1R1-208ENST00000575214 H0Y8X5 98 aa20.89■□□□□ 0.93
HCFC1R1-208ENST00000575214 MATN3O15232 486 aa20.89■□□□□ 0.93
HCFC1R1-208ENST00000575214 MAGEC1O60732 1142 aa20.89■□□□□ 0.93
HCFC1R1-208ENST00000575214 PAK4O96013 591 aaPredicted RBP20.89■□□□□ 0.93
HCFC1R1-208ENST00000575214 CR2P20023 1033 aa20.89■□□□□ 0.93
HCFC1R1-208ENST00000575214 ITKQ08881 620 aa20.89■□□□□ 0.93
HCFC1R1-208ENST00000575214 OVGP1Q12889 678 aa20.89■□□□□ 0.93
HCFC1R1-208ENST00000575214 FGL2Q14314 439 aa20.89■□□□□ 0.93
HCFC1R1-208ENST00000575214 PSAPL1Q6NUJ1 521 aa20.89■□□□□ 0.93
HCFC1R1-208ENST00000575214 ERAP2Q6P179 960 aa20.89■□□□□ 0.93
HCFC1R1-208ENST00000575214 IQCHQ86VS3 1027 aa20.89■□□□□ 0.93
HCFC1R1-208ENST00000575214 ZSWIM9Q86XI8 627 aa20.89■□□□□ 0.93
HCFC1R1-208ENST00000575214 TEX26Q8N6G2 289 aa20.89■□□□□ 0.93
HCFC1R1-208ENST00000575214 DEFB124Q8NES8 71 aa20.89■□□□□ 0.93
HCFC1R1-208ENST00000575214 MAML1Q92585 1016 aa20.89■□□□□ 0.93
HCFC1R1-208ENST00000575214 WRAP53Q9BUR4 548 aaKnown RBP20.89■□□□□ 0.93
HCFC1R1-208ENST00000575214 SLC32A1Q9H598 525 aa20.89■□□□□ 0.93
HCFC1R1-208ENST00000575214 NOD2Q9HC29 1040 aa20.89■□□□□ 0.93
HCFC1R1-208ENST00000575214 PCDH12Q9NPG4 1184 aa20.89■□□□□ 0.93
HCFC1R1-208ENST00000575214 TTLL3Q9Y4R7 772 aa20.89■□□□□ 0.93
HCFC1R1-208ENST00000575214 MMP20O60882 483 aa20.88■□□□□ 0.93
HCFC1R1-208ENST00000575214 KCNK5O95279 499 aa20.88■□□□□ 0.93
HCFC1R1-208ENST00000575214 PRKCGP05129 697 aa20.88■□□□□ 0.93
HCFC1R1-208ENST00000575214 ZNF883P0CG24 379 aa20.88■□□□□ 0.93
HCFC1R1-208ENST00000575214 CD59P13987 128 aa20.88■□□□□ 0.93
HCFC1R1-208ENST00000575214 CSRP1P21291 193 aaKnown RBP20.88■□□□□ 0.93
HCFC1R1-208ENST00000575214 CDKN2BP42772 138 aa20.88■□□□□ 0.93
HCFC1R1-208ENST00000575214 MARCKSL1P49006 195 aa20.88■□□□□ 0.93
HCFC1R1-208ENST00000575214 CCT8P50990 548 aa20.88■□□□□ 0.93
HCFC1R1-208ENST00000575214 CLDN2P57739 230 aa20.88■□□□□ 0.93
HCFC1R1-208ENST00000575214 NXPH1P58417 271 aa20.88■□□□□ 0.93
HCFC1R1-208ENST00000575214 KIF5AQ12840 1032 aa20.88■□□□□ 0.93
HCFC1R1-208ENST00000575214 LLGL1Q15334 1064 aa20.88■□□□□ 0.93
HCFC1R1-208ENST00000575214 ZNF423Q2M1K9 1284 aa20.88■□□□□ 0.93
HCFC1R1-208ENST00000575214 KAZNQ674X7 775 aa20.88■□□□□ 0.93
HCFC1R1-208ENST00000575214 NPNTQ6UXI9 565 aa20.88■□□□□ 0.93
HCFC1R1-208ENST00000575214 SPOCD1Q6ZMY3 1216 aa20.88■□□□□ 0.93
HCFC1R1-208ENST00000575214 CCDC50Q8IVM0 306 aa20.88■□□□□ 0.93
HCFC1R1-208ENST00000575214 CCDC13Q8IYE1 715 aa20.88■□□□□ 0.93
HCFC1R1-208ENST00000575214 KATNAL2Q8IYT4 538 aa20.88■□□□□ 0.93
HCFC1R1-208ENST00000575214 PDCD6IPQ8WUM4 868 aaKnown RBP20.88■□□□□ 0.93
HCFC1R1-208ENST00000575214 ECHDC3Q96DC8 303 aa20.88■□□□□ 0.93
HCFC1R1-208ENST00000575214 KLHDC7BQ96G42 594 aa20.88■□□□□ 0.93
HCFC1R1-208ENST00000575214 NSMCE3Q96MG7 304 aa20.88■□□□□ 0.93
HCFC1R1-208ENST00000575214 C1QTNF2Q9BXJ5 285 aa20.88■□□□□ 0.93
HCFC1R1-208ENST00000575214 HAUS2Q9NVX0 235 aa20.88■□□□□ 0.93
HCFC1R1-208ENST00000575214 RBM22Q9NW64 420 aaKnown RBP eCLIP20.88■□□□□ 0.93
HCFC1R1-208ENST00000575214 ATP8A1Q9Y2Q0 1164 aa20.88■□□□□ 0.93
HCFC1R1-208ENST00000575214 PCDHGC4Q9Y5F7 938 aa20.88■□□□□ 0.93
HCFC1R1-208ENST00000575214 TRAFD1O14545 582 aaPredicted RBP20.87■□□□□ 0.93
HCFC1R1-208ENST00000575214 ZRANB2O95218 330 aaKnown RBP eCLIP20.87■□□□□ 0.93
HCFC1R1-208ENST00000575214 CCNB1P14635 433 aa20.87■□□□□ 0.93
HCFC1R1-208ENST00000575214 TFDP2Q14188 446 aa20.87■□□□□ 0.93
HCFC1R1-208ENST00000575214 RALGPS1Q5JS13 557 aa20.87■□□□□ 0.93
HCFC1R1-208ENST00000575214 PRAMEF14Q5SWL7 426 aa20.87■□□□□ 0.93
HCFC1R1-208ENST00000575214 KRT35Q92764 455 aa20.87■□□□□ 0.93
HCFC1R1-208ENST00000575214 FATE1Q969F0 183 aa20.87■□□□□ 0.93
HCFC1R1-208ENST00000575214 RBM41Q96IZ5 413 aaKnown RBP20.87■□□□□ 0.93
HCFC1R1-208ENST00000575214 LGMNQ99538 433 aa20.87■□□□□ 0.93
HCFC1R1-208ENST00000575214 ELF4Q99607 663 aaPredicted RBP20.87■□□□□ 0.93
HCFC1R1-208ENST00000575214 POLR1EQ9GZS1 481 aaKnown RBP20.87■□□□□ 0.93
HCFC1R1-208ENST00000575214 ASCC3Q8N3C0 2202 aaKnown RBP20.87■□□□□ 0.93
HCFC1R1-208ENST00000575214 MACROD2A1Z1Q3 448 aa20.86■□□□□ 0.93
HCFC1R1-208ENST00000575214 RIOK3O14730 519 aaKnown RBP20.86■□□□□ 0.93
HCFC1R1-208ENST00000575214 PPP1R12AO14974 1030 aaPredicted RBP20.86■□□□□ 0.93
HCFC1R1-208ENST00000575214 RAD51BO15315 384 aa20.86■□□□□ 0.93
HCFC1R1-208ENST00000575214 SH3BP5O60239 455 aa20.86■□□□□ 0.93
HCFC1R1-208ENST00000575214 DFNA5O60443 496 aa20.86■□□□□ 0.93
HCFC1R1-208ENST00000575214 SOCS5O75159 536 aa20.86■□□□□ 0.93
HCFC1R1-208ENST00000575214 TM7SF2O76062 418 aa20.86■□□□□ 0.93
HCFC1R1-208ENST00000575214 THEGLP0DJG4 465 aa20.86■□□□□ 0.93
HCFC1R1-208ENST00000575214 KRT10P13645 584 aa20.86■□□□□ 0.93
HCFC1R1-208ENST00000575214 POLR2LP62875 67 aaKnown RBP20.86■□□□□ 0.93
HCFC1R1-208ENST00000575214 FAM193AP78312 1265 aa20.86■□□□□ 0.93
HCFC1R1-208ENST00000575214 IL9RQ01113 521 aa20.86■□□□□ 0.93
HCFC1R1-208ENST00000575214 PPIDQ08752 370 aaKnown RBP20.86■□□□□ 0.93
HCFC1R1-208ENST00000575214 PDK1Q15118 436 aa20.86■□□□□ 0.93
HCFC1R1-208ENST00000575214 TMEM52BQ4KMG9 183 aa20.86■□□□□ 0.93
HCFC1R1-208ENST00000575214 TFDP3Q5H9I0 405 aa20.86■□□□□ 0.93
HCFC1R1-208ENST00000575214 GCNT7Q6ZNI0 430 aa20.86■□□□□ 0.93
HCFC1R1-208ENST00000575214 PTAR1Q7Z6K3 402 aaPredicted RBP20.86■□□□□ 0.93
HCFC1R1-208ENST00000575214 PIP4P1Q86T03 277 aa20.86■□□□□ 0.93
HCFC1R1-208ENST00000575214 NAXDQ8IW45 347 aa20.86■□□□□ 0.93
HCFC1R1-208ENST00000575214 RCOR2Q8IZ40 523 aa20.86■□□□□ 0.93
HCFC1R1-208ENST00000575214 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.86■□□□□ 0.93
HCFC1R1-208ENST00000575214 KIAA1524Q8TCG1 905 aa20.86■□□□□ 0.93
HCFC1R1-208ENST00000575214 SEMA3CQ99985 751 aa20.86■□□□□ 0.93
HCFC1R1-208ENST00000575214 TRIM10Q9UDY6 481 aa20.86■□□□□ 0.93
HCFC1R1-208ENST00000575214 HS3ST3A1Q9Y663 406 aa20.86■□□□□ 0.93
HCFC1R1-208ENST00000575214 SHROOM3Q8TF72 1996 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms