RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 PMPCBO75439 489 aa19.22■□□□□ 0.67
SCARF1-206ENST00000573852 CCNCP24863 283 aa19.22■□□□□ 0.67
SCARF1-206ENST00000573852 ADRA1AP35348 466 aa19.22■□□□□ 0.67
SCARF1-206ENST00000573852 PLK1P53350 603 aa19.22■□□□□ 0.67
SCARF1-206ENST00000573852 TXNL4AP83876 142 aaKnown RBP19.22■□□□□ 0.67
SCARF1-206ENST00000573852 SQLEQ14534 574 aa19.22■□□□□ 0.67
SCARF1-206ENST00000573852 MTX3Q5HYI7 312 aa19.22■□□□□ 0.67
SCARF1-206ENST00000573852 TECRLQ5HYJ1 363 aa19.22■□□□□ 0.67
SCARF1-206ENST00000573852 HERC6Q8IVU3 1022 aa19.22■□□□□ 0.67
SCARF1-206ENST00000573852 TSPAN14Q8NG11 270 aa19.22■□□□□ 0.67
SCARF1-206ENST00000573852 PPP1R10Q96QC0 940 aaKnown RBP19.22■□□□□ 0.67
SCARF1-206ENST00000573852 TSPAN18Q96SJ8 248 aa19.22■□□□□ 0.67
SCARF1-206ENST00000573852 OLFM1Q99784 485 aa19.22■□□□□ 0.67
SCARF1-206ENST00000573852 PREBQ9HCU5 417 aa19.22■□□□□ 0.67
SCARF1-206ENST00000573852 ADARB2Q9NS39 739 aaKnown RBP19.22■□□□□ 0.67
SCARF1-206ENST00000573852 TREX1Q9NSU2 369 aa19.22■□□□□ 0.67
SCARF1-206ENST00000573852 TRIP12Q14669 1992 aaPredicted RBP19.22■□□□□ 0.67
SCARF1-206ENST00000573852 ARHGAP10A1A4S6 786 aa19.21■□□□□ 0.67
SCARF1-206ENST00000573852 ARHGEF37A1IGU5 675 aa19.21■□□□□ 0.67
SCARF1-206ENST00000573852 MEIS3P2A8K0S8 358 aa19.21■□□□□ 0.67
SCARF1-206ENST00000573852 A8MT66 165 aa19.21■□□□□ 0.67
SCARF1-206ENST00000573852 H0YJX3 145 aa19.21■□□□□ 0.67
SCARF1-206ENST00000573852 ANXA9O76027 345 aa19.21■□□□□ 0.67
SCARF1-206ENST00000573852 CPB1P15086 417 aa19.21■□□□□ 0.67
SCARF1-206ENST00000573852 CDH2P19022 906 aaPredicted RBP19.21■□□□□ 0.67
SCARF1-206ENST00000573852 SLC12A2P55011 1212 aa19.21■□□□□ 0.67
SCARF1-206ENST00000573852 TBC1D25Q3MII6 688 aa19.21■□□□□ 0.67
SCARF1-206ENST00000573852 POTEHQ6S545 545 aa19.21■□□□□ 0.67
SCARF1-206ENST00000573852 LAYNQ6UX15 382 aa19.21■□□□□ 0.67
SCARF1-206ENST00000573852 IL12RB2Q99665 862 aa19.21■□□□□ 0.67
SCARF1-206ENST00000573852 RRN3Q9NYV6 651 aa19.21■□□□□ 0.67
SCARF1-206ENST00000573852 CD300AQ9UGN4 299 aa19.21■□□□□ 0.67
SCARF1-206ENST00000573852 PYGLP06737 847 aa19.21■□□□□ 0.67
SCARF1-206ENST00000573852 ZNF135P52742 658 aaPredicted RBP19.21■□□□□ 0.67
SCARF1-206ENST00000573852 PFKPQ01813 784 aa19.21■□□□□ 0.67
SCARF1-206ENST00000573852 POU4F1Q01851 419 aa19.21■□□□□ 0.67
SCARF1-206ENST00000573852 HMBOX1Q6NT76 420 aa19.21■□□□□ 0.67
SCARF1-206ENST00000573852 CUZD1Q86UP6 607 aa19.21■□□□□ 0.67
SCARF1-206ENST00000573852 NUP93Q8N1F7 819 aa19.21■□□□□ 0.67
SCARF1-206ENST00000573852 MYO1HQ8N1T3 1032 aa19.21■□□□□ 0.67
SCARF1-206ENST00000573852 ATPAF2Q8N5M1 289 aa19.21■□□□□ 0.67
SCARF1-206ENST00000573852 TOP1MTQ969P6 601 aa19.21■□□□□ 0.67
SCARF1-206ENST00000573852 CDCA5Q96FF9 252 aa19.21■□□□□ 0.67
SCARF1-206ENST00000573852 IRAK4Q9NWZ3 460 aa19.21■□□□□ 0.67
SCARF1-206ENST00000573852 GMPR2Q9P2T1 348 aaKnown RBP19.21■□□□□ 0.67
SCARF1-206ENST00000573852 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.21■□□□□ 0.67
SCARF1-206ENST00000573852 TCRBV3S1A0A5B6 114 aa19.2■□□□□ 0.66
SCARF1-206ENST00000573852 MAFKO60675 156 aa19.2■□□□□ 0.66
SCARF1-206ENST00000573852 CDK4P11802 303 aa19.2■□□□□ 0.66
SCARF1-206ENST00000573852 ZNF33AQ06730 810 aa19.2■□□□□ 0.66
SCARF1-206ENST00000573852 SEPT6Q14141 434 aa19.2■□□□□ 0.66
SCARF1-206ENST00000573852 NOMO2Q5JPE7 1267 aa19.2■□□□□ 0.66
SCARF1-206ENST00000573852 C6orf10Q5SRN2 563 aa19.2■□□□□ 0.66
SCARF1-206ENST00000573852 CARM1Q86X55 608 aa19.2■□□□□ 0.66
SCARF1-206ENST00000573852 OR9I1Q8NGQ6 314 aa19.2■□□□□ 0.66
SCARF1-206ENST00000573852 TMIGD2Q96BF3 282 aa19.2■□□□□ 0.66
SCARF1-206ENST00000573852 CIB1Q99828 191 aa19.2■□□□□ 0.66
SCARF1-206ENST00000573852 NOL11Q9H8H0 719 aaKnown RBP19.2■□□□□ 0.66
SCARF1-206ENST00000573852 SPAG4Q9NPE6 437 aa19.2■□□□□ 0.66
SCARF1-206ENST00000573852 MRPL40Q9NQ50 206 aaKnown RBP19.2■□□□□ 0.66
SCARF1-206ENST00000573852 IPO13O94829 963 aaKnown RBP19.2■□□□□ 0.66
SCARF1-206ENST00000573852 TRAP1Q12931 704 aaKnown RBP19.2■□□□□ 0.66
SCARF1-206ENST00000573852 MAPRE2Q15555 327 aa19.2■□□□□ 0.66
SCARF1-206ENST00000573852 NEPROQ6NW34 567 aa19.2■□□□□ 0.66
SCARF1-206ENST00000573852 PHF21BQ96EK2 531 aa19.2■□□□□ 0.66
SCARF1-206ENST00000573852 CCT7Q99832 543 aa19.2■□□□□ 0.66
SCARF1-206ENST00000573852 OSBPL11Q9BXB4 747 aa19.2■□□□□ 0.66
SCARF1-206ENST00000573852 TSPYL2Q9H2G4 693 aaPredicted RBP19.2■□□□□ 0.66
SCARF1-206ENST00000573852 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.2■□□□□ 0.66
SCARF1-206ENST00000573852 DYNC1LI2O43237 492 aaPredicted RBP19.19■□□□□ 0.66
SCARF1-206ENST00000573852 TREHO43280 583 aa19.19■□□□□ 0.66
SCARF1-206ENST00000573852 MT-CO1P00395 513 aa19.19■□□□□ 0.66
SCARF1-206ENST00000573852 HLA-DQB2P05538 268 aa19.19■□□□□ 0.66
SCARF1-206ENST00000573852 SNRPB2P08579 225 aaKnown RBP19.19■□□□□ 0.66
SCARF1-206ENST00000573852 YWHAQP27348 245 aa19.19■□□□□ 0.66
SCARF1-206ENST00000573852 SLC7A1P30825 629 aa19.19■□□□□ 0.66
SCARF1-206ENST00000573852 AFF1P51825 1210 aaKnown RBP19.19■□□□□ 0.66
SCARF1-206ENST00000573852 KPNA2P52292 529 aaKnown RBP19.19■□□□□ 0.66
SCARF1-206ENST00000573852 HPCAP84074 193 aa19.19■□□□□ 0.66
SCARF1-206ENST00000573852 ADRM1Q16186 407 aa19.19■□□□□ 0.66
SCARF1-206ENST00000573852 FAM83EQ2M2I3 478 aa19.19■□□□□ 0.66
SCARF1-206ENST00000573852 OLFML2BQ68BL8 750 aa19.19■□□□□ 0.66
SCARF1-206ENST00000573852 ZNF467Q7Z7K2 595 aaPredicted RBP19.19■□□□□ 0.66
SCARF1-206ENST00000573852 FAR2Q96K12 515 aa19.19■□□□□ 0.66
SCARF1-206ENST00000573852 SLC39A3Q9BRY0 314 aa19.19■□□□□ 0.66
SCARF1-206ENST00000573852 TMEM79Q9BSE2 394 aa19.19■□□□□ 0.66
SCARF1-206ENST00000573852 SLC39A8Q9C0K1 460 aa19.19■□□□□ 0.66
SCARF1-206ENST00000573852 NDFIP2Q9NV92 336 aa19.19■□□□□ 0.66
SCARF1-206ENST00000573852 ARHGEF38Q9NXL2 777 aa19.19■□□□□ 0.66
SCARF1-206ENST00000573852 PLOD2O00469 737 aa19.19■□□□□ 0.66
SCARF1-206ENST00000573852 MRASO14807 208 aa19.19■□□□□ 0.66
SCARF1-206ENST00000573852 GPC4O75487 556 aa19.19■□□□□ 0.66
SCARF1-206ENST00000573852 FAM163BP0C2L3 166 aa19.19■□□□□ 0.66
SCARF1-206ENST00000573852 GEMP55040 296 aa19.19■□□□□ 0.66
SCARF1-206ENST00000573852 PSMD5Q16401 504 aa19.19■□□□□ 0.66
SCARF1-206ENST00000573852 TWF2Q6IBS0 349 aaKnown RBP19.19■□□□□ 0.66
SCARF1-206ENST00000573852 KIAA0930Q6ICG6 404 aaPredicted RBP19.19■□□□□ 0.66
SCARF1-206ENST00000573852 CYHR1Q6ZMK1 362 aa19.19■□□□□ 0.66
SCARF1-206ENST00000573852 DPP9Q86TI2 863 aa19.19■□□□□ 0.66
SCARF1-206ENST00000573852 ALDH16A1Q8IZ83 802 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms