RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 FUBP1Q96AE4 644 aaKnown RBP17.49■□□□□ 0.39
SMG6-212ENST00000573153 CSPG4P5Q96PW8 444 aa17.49■□□□□ 0.39
SMG6-212ENST00000573153 NUP85Q9BW27 656 aa17.49■□□□□ 0.39
SMG6-212ENST00000573153 ZWILCHQ9H900 591 aa17.49■□□□□ 0.39
SMG6-212ENST00000573153 IP6K2Q9UHH9 426 aa17.49■□□□□ 0.39
SMG6-212ENST00000573153 ANKRD36A6QL64 1941 aa17.49■□□□□ 0.39
SMG6-212ENST00000573153 MMP20O60882 483 aa17.48■□□□□ 0.39
SMG6-212ENST00000573153 RFPL3O75679 317 aa17.48■□□□□ 0.39
SMG6-212ENST00000573153 CSF2P04141 144 aa17.48■□□□□ 0.39
SMG6-212ENST00000573153 AMPD1P23109 780 aa17.48■□□□□ 0.39
SMG6-212ENST00000573153 ACP1P24666 158 aa17.48■□□□□ 0.39
SMG6-212ENST00000573153 EIF4A3P38919 411 aaKnown RBP17.48■□□□□ 0.39
SMG6-212ENST00000573153 MMP12P39900 470 aa17.48■□□□□ 0.39
SMG6-212ENST00000573153 RAD51Q06609 339 aa17.48■□□□□ 0.39
SMG6-212ENST00000573153 IL10RBQ08334 325 aa17.48■□□□□ 0.39
SMG6-212ENST00000573153 ZNF211Q13398 564 aaPredicted RBP17.48■□□□□ 0.39
SMG6-212ENST00000573153 PTAR1Q7Z6K3 402 aaPredicted RBP17.48■□□□□ 0.39
SMG6-212ENST00000573153 ZNF354CQ86Y25 554 aa17.48■□□□□ 0.39
SMG6-212ENST00000573153 CAMK1DQ8IU85 385 aa17.48■□□□□ 0.39
SMG6-212ENST00000573153 PGBD5Q8N414 524 aa17.48■□□□□ 0.39
SMG6-212ENST00000573153 SPOCK2Q92563 424 aa17.48■□□□□ 0.39
SMG6-212ENST00000573153 PACSIN1Q9BY11 444 aa17.48■□□□□ 0.39
SMG6-212ENST00000573153 SUV39H2Q9H5I1 410 aa17.48■□□□□ 0.39
SMG6-212ENST00000573153 PCDH12Q9NPG4 1184 aa17.48■□□□□ 0.39
SMG6-212ENST00000573153 DKK4Q9UBT3 224 aa17.48■□□□□ 0.39
SMG6-212ENST00000573153 ANAPC7Q9UJX3 599 aa17.48■□□□□ 0.39
SMG6-212ENST00000573153 H3BRJ5 948 aa17.47■□□□□ 0.39
SMG6-212ENST00000573153 RIOK3O14730 519 aaKnown RBP17.47■□□□□ 0.39
SMG6-212ENST00000573153 DAPK3O43293 454 aa17.47■□□□□ 0.39
SMG6-212ENST00000573153 MAFKO60675 156 aa17.47■□□□□ 0.39
SMG6-212ENST00000573153 PRKCGP05129 697 aa17.47■□□□□ 0.39
SMG6-212ENST00000573153 CD48P09326 243 aa17.47■□□□□ 0.39
SMG6-212ENST00000573153 RABIFP47224 123 aa17.47■□□□□ 0.39
SMG6-212ENST00000573153 SUOXP51687 545 aa17.47■□□□□ 0.39
SMG6-212ENST00000573153 SLC10A7Q0GE19 358 aa17.47■□□□□ 0.39
SMG6-212ENST00000573153 RFTN1Q14699 578 aaPredicted RBP17.47■□□□□ 0.39
SMG6-212ENST00000573153 GRM3Q14832 879 aa17.47■□□□□ 0.39
SMG6-212ENST00000573153 AGERQ15109 404 aa17.47■□□□□ 0.39
SMG6-212ENST00000573153 NFKBIBQ15653 356 aa17.47■□□□□ 0.39
SMG6-212ENST00000573153 UGP2Q16851 508 aa17.47■□□□□ 0.39
SMG6-212ENST00000573153 KCTD16Q68DU8 428 aa17.47■□□□□ 0.39
SMG6-212ENST00000573153 TTC7BQ86TV6 843 aa17.47■□□□□ 0.39
SMG6-212ENST00000573153 MDM1Q8TC05 714 aa17.47■□□□□ 0.39
SMG6-212ENST00000573153 RFFLQ8WZ73 363 aa17.47■□□□□ 0.39
SMG6-212ENST00000573153 PSKH2Q96QS6 385 aa17.47■□□□□ 0.39
SMG6-212ENST00000573153 TUBGCP5Q96RT8 1024 aa17.47■□□□□ 0.39
SMG6-212ENST00000573153 TCEAL2Q9H3H9 227 aaPredicted RBP17.47■□□□□ 0.39
SMG6-212ENST00000573153 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.47■□□□□ 0.39
SMG6-212ENST00000573153 RCOR3Q9P2K3 495 aaPredicted RBP17.47■□□□□ 0.39
SMG6-212ENST00000573153 UVRAGQ9P2Y5 699 aa17.47■□□□□ 0.39
SMG6-212ENST00000573153 IPO11Q9UI26 975 aaKnown RBP17.47■□□□□ 0.39
SMG6-212ENST00000573153 LCMT1Q9UIC8 334 aa17.47■□□□□ 0.39
SMG6-212ENST00000573153 COQ6Q9Y2Z9 468 aa17.47■□□□□ 0.39
SMG6-212ENST00000573153 APC2O95996 2303 aa17.47■□□□□ 0.39
SMG6-212ENST00000573153 TDRD6O60522 2096 aaKnown RBP17.46■□□□□ 0.39
SMG6-212ENST00000573153 MYO1FO00160 1098 aa17.46■□□□□ 0.39
SMG6-212ENST00000573153 C1SP09871 688 aa17.46■□□□□ 0.39
SMG6-212ENST00000573153 CKMT2P17540 419 aa17.46■□□□□ 0.39
SMG6-212ENST00000573153 SEMG2Q02383 582 aa17.46■□□□□ 0.39
SMG6-212ENST00000573153 PDE1CQ14123 709 aaPredicted RBP17.46■□□□□ 0.39
SMG6-212ENST00000573153 IHHQ14623 411 aa17.46■□□□□ 0.39
SMG6-212ENST00000573153 IRF4Q15306 451 aa17.46■□□□□ 0.39
SMG6-212ENST00000573153 WSCD2Q2TBF2 565 aa17.46■□□□□ 0.39
SMG6-212ENST00000573153 SARM1Q6SZW1 724 aa17.46■□□□□ 0.39
SMG6-212ENST00000573153 SRLQ86TD4 932 aa17.46■□□□□ 0.39
SMG6-212ENST00000573153 PARGQ86W56 976 aa17.46■□□□□ 0.39
SMG6-212ENST00000573153 TMPRSS12Q86WS5 348 aa17.46■□□□□ 0.39
SMG6-212ENST00000573153 DCP2Q8IU60 420 aaKnown RBP17.46■□□□□ 0.39
SMG6-212ENST00000573153 GALNT15Q8N3T1 639 aa17.46■□□□□ 0.39
SMG6-212ENST00000573153 ZNF548Q8NEK5 533 aaPredicted RBP17.46■□□□□ 0.39
SMG6-212ENST00000573153 ZNF641Q96N77 438 aaPredicted RBP17.46■□□□□ 0.39
SMG6-212ENST00000573153 WRAP53Q9BUR4 548 aaKnown RBP17.46■□□□□ 0.39
SMG6-212ENST00000573153 ABHD10Q9NUJ1 306 aa17.46■□□□□ 0.39
SMG6-212ENST00000573153 TTC24A2A3L6 582 aaPredicted RBP17.45■□□□□ 0.38
SMG6-212ENST00000573153 DFFAO00273 331 aa17.45■□□□□ 0.38
SMG6-212ENST00000573153 FPGTO14772 594 aa17.45■□□□□ 0.38
SMG6-212ENST00000573153 MFAP3LO75121 409 aa17.45■□□□□ 0.38
SMG6-212ENST00000573153 NEBLO76041 1014 aa17.45■□□□□ 0.38
SMG6-212ENST00000573153 H2AFZP0C0S5 128 aa17.45■□□□□ 0.38
SMG6-212ENST00000573153 MYF5P13349 255 aa17.45■□□□□ 0.38
SMG6-212ENST00000573153 C6P13671 934 aa17.45■□□□□ 0.38
SMG6-212ENST00000573153 ARL4AP40617 200 aa17.45■□□□□ 0.38
SMG6-212ENST00000573153 TAS2R40P59535 323 aa17.45■□□□□ 0.38
SMG6-212ENST00000573153 NSUN2Q08J23 767 aaKnown RBP eCLIP17.45■□□□□ 0.38
SMG6-212ENST00000573153 MMRN1Q13201 1228 aa17.45■□□□□ 0.38
SMG6-212ENST00000573153 ATP13A4Q4VNC1 1196 aa17.45■□□□□ 0.38
SMG6-212ENST00000573153 H2AFVQ71UI9 128 aa17.45■□□□□ 0.38
SMG6-212ENST00000573153 RBFAQ8N0V3 343 aa17.45■□□□□ 0.38
SMG6-212ENST00000573153 ZNF564Q8TBZ8 553 aaPredicted RBP17.45■□□□□ 0.38
SMG6-212ENST00000573153 HSPH1Q92598 858 aa17.45■□□□□ 0.38
SMG6-212ENST00000573153 ZNF599Q96NL3 588 aa17.45■□□□□ 0.38
SMG6-212ENST00000573153 ZNHIT6Q9NWK9 470 aaKnown RBP17.45■□□□□ 0.38
SMG6-212ENST00000573153 TRABD2BA6NFA1 517 aa17.44■□□□□ 0.38
SMG6-212ENST00000573153 K7ESM1 405 aa17.44■□□□□ 0.38
SMG6-212ENST00000573153 SCAMP1O15126 338 aa17.44■□□□□ 0.38
SMG6-212ENST00000573153 FFAR2O15552 330 aa17.44■□□□□ 0.38
SMG6-212ENST00000573153 HTRA2O43464 458 aaPredicted RBP17.44■□□□□ 0.38
SMG6-212ENST00000573153 PALMO75781 387 aa17.44■□□□□ 0.38
SMG6-212ENST00000573153 TM7SF2O76062 418 aa17.44■□□□□ 0.38
SMG6-212ENST00000573153 TPM1P09493 284 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms