RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 OR6J1Q8NGC5 347 aa10.84□□□□□ -0.67
CCDC40-207ENST00000572253 SPATA22Q8NHS9 363 aa10.84□□□□□ -0.67
CCDC40-207ENST00000572253 TRMOQ9BU70 441 aa10.84□□□□□ -0.67
CCDC40-207ENST00000572253 RHOBTB2Q9BYZ6 727 aa10.84□□□□□ -0.67
CCDC40-207ENST00000572253 NOL11Q9H8H0 719 aaKnown RBP10.84□□□□□ -0.67
CCDC40-207ENST00000572253 MRM3Q9HC36 420 aaKnown RBP10.84□□□□□ -0.67
CCDC40-207ENST00000572253 RHBDL2Q9NX52 303 aa10.84□□□□□ -0.67
CCDC40-207ENST00000572253 HSFX1Q9UBD0 423 aa10.84□□□□□ -0.67
CCDC40-207ENST00000572253 RNF11Q9Y3C5 154 aa10.84□□□□□ -0.67
CCDC40-207ENST00000572253 MTF2Q9Y483 593 aaPredicted RBP10.84□□□□□ -0.67
CCDC40-207ENST00000572253 ZNF839A8K0R7 811 aa10.84□□□□□ -0.67
CCDC40-207ENST00000572253 TRIM24O15164 1050 aa10.84□□□□□ -0.67
CCDC40-207ENST00000572253 CLCN5P51795 746 aa10.84□□□□□ -0.67
CCDC40-207ENST00000572253 PRAMEP78395 509 aa10.84□□□□□ -0.67
CCDC40-207ENST00000572253 MYBPC3Q14896 1274 aa10.84□□□□□ -0.67
CCDC40-207ENST00000572253 KIF19Q2TAC6 998 aa10.84□□□□□ -0.67
CCDC40-207ENST00000572253 KIAA0930Q6ICG6 404 aaPredicted RBP10.84□□□□□ -0.67
CCDC40-207ENST00000572253 FAM45BPQ6NSW5 357 aa10.84□□□□□ -0.67
CCDC40-207ENST00000572253 PRMT9Q6P2P2 845 aa10.84□□□□□ -0.67
CCDC40-207ENST00000572253 CCDC117Q8IWD4 279 aaPredicted RBP10.84□□□□□ -0.67
CCDC40-207ENST00000572253 ANKRD13AQ8IZ07 590 aa10.84□□□□□ -0.67
CCDC40-207ENST00000572253 OR2T34Q8NGX1 318 aa10.84□□□□□ -0.67
CCDC40-207ENST00000572253 OR2T3Q8NH03 318 aa10.84□□□□□ -0.67
CCDC40-207ENST00000572253 FAM45AQ8TCE6 357 aa10.84□□□□□ -0.67
CCDC40-207ENST00000572253 GAB3Q8WWW8 586 aa10.84□□□□□ -0.67
CCDC40-207ENST00000572253 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.84□□□□□ -0.67
CCDC40-207ENST00000572253 SARDHQ9UL12 918 aa10.84□□□□□ -0.67
CCDC40-207ENST00000572253 NEMP2A6NFY4 417 aa10.84□□□□□ -0.67
CCDC40-207ENST00000572253 PMPCBO75439 489 aa10.84□□□□□ -0.67
CCDC40-207ENST00000572253 CYP2C18P33260 490 aa10.84□□□□□ -0.67
CCDC40-207ENST00000572253 TSTD2Q5T7W7 516 aa10.84□□□□□ -0.67
CCDC40-207ENST00000572253 FAM35AQ86V20 835 aa10.84□□□□□ -0.67
CCDC40-207ENST00000572253 C2CD4AQ8NCU7 369 aaPredicted RBP10.84□□□□□ -0.67
CCDC40-207ENST00000572253 EDEM1Q92611 657 aa10.84□□□□□ -0.67
CCDC40-207ENST00000572253 DUS3LQ96G46 650 aaKnown RBP10.84□□□□□ -0.67
CCDC40-207ENST00000572253 SNX10Q9Y5X0 201 aa10.84□□□□□ -0.67
CCDC40-207ENST00000572253 BBIP1A8MTZ0 92 aa10.84□□□□□ -0.67
CCDC40-207ENST00000572253 HTRA2O43464 458 aaPredicted RBP10.84□□□□□ -0.67
CCDC40-207ENST00000572253 FYNP06241 537 aa10.84□□□□□ -0.67
CCDC40-207ENST00000572253 ALDH3B2P48448 385 aa10.84□□□□□ -0.67
CCDC40-207ENST00000572253 LHX1P48742 406 aa10.84□□□□□ -0.67
CCDC40-207ENST00000572253 CXCR3P49682 368 aa10.84□□□□□ -0.67
CCDC40-207ENST00000572253 SLC7A2P52569 658 aa10.84□□□□□ -0.67
CCDC40-207ENST00000572253 PLOD1Q02809 727 aaPredicted RBP10.84□□□□□ -0.67
CCDC40-207ENST00000572253 TTC33Q6PID6 262 aaPredicted RBP10.84□□□□□ -0.67
CCDC40-207ENST00000572253 LIMS2Q7Z4I7 341 aa10.84□□□□□ -0.67
CCDC40-207ENST00000572253 CAMK1DQ8IU85 385 aa10.84□□□□□ -0.67
CCDC40-207ENST00000572253 PACRGLQ8N7B6 248 aa10.84□□□□□ -0.67
CCDC40-207ENST00000572253 ROPN1LQ96C74 230 aa10.84□□□□□ -0.67
CCDC40-207ENST00000572253 BIRC8Q96P09 236 aa10.84□□□□□ -0.67
CCDC40-207ENST00000572253 SIK2Q9H0K1 926 aa10.84□□□□□ -0.67
CCDC40-207ENST00000572253 VPS45Q9NRW7 570 aa10.84□□□□□ -0.67
CCDC40-207ENST00000572253 AURKCQ9UQB9 309 aa10.84□□□□□ -0.67
CCDC40-207ENST00000572253 TRAF6Q9Y4K3 522 aa10.84□□□□□ -0.67
CCDC40-207ENST00000572253 PRORSD1PA6NEY8 169 aa10.83□□□□□ -0.68
CCDC40-207ENST00000572253 A8MT66 165 aa10.83□□□□□ -0.68
CCDC40-207ENST00000572253 NELFEP18615 380 aaKnown RBP10.83□□□□□ -0.68
CCDC40-207ENST00000572253 ATP4BP51164 291 aa10.83□□□□□ -0.68
CCDC40-207ENST00000572253 PFKPQ01813 784 aa10.83□□□□□ -0.68
CCDC40-207ENST00000572253 SOX4Q06945 474 aaPredicted RBP10.83□□□□□ -0.68
CCDC40-207ENST00000572253 GEN1Q17RS7 908 aa10.83□□□□□ -0.68
CCDC40-207ENST00000572253 TECRLQ5HYJ1 363 aa10.83□□□□□ -0.68
CCDC40-207ENST00000572253 MAMDC4Q6UXC1 1216 aa10.83□□□□□ -0.68
CCDC40-207ENST00000572253 PAQR9Q6ZVX9 377 aa10.83□□□□□ -0.68
CCDC40-207ENST00000572253 LZTR1Q8N653 840 aa10.83□□□□□ -0.68
CCDC40-207ENST00000572253 ANKFN1Q8N957 763 aa10.83□□□□□ -0.68
CCDC40-207ENST00000572253 FAM47BQ8NA70 645 aa10.83□□□□□ -0.68
CCDC40-207ENST00000572253 DIS3LQ8TF46 1054 aaKnown RBP10.83□□□□□ -0.68
CCDC40-207ENST00000572253 ITFG2Q969R8 447 aa10.83□□□□□ -0.68
CCDC40-207ENST00000572253 PPP1R14BQ96C90 147 aa10.83□□□□□ -0.68
CCDC40-207ENST00000572253 TRIM62Q9BVG3 475 aa10.83□□□□□ -0.68
CCDC40-207ENST00000572253 ANKRD60Q9BZ19 345 aa10.83□□□□□ -0.68
CCDC40-207ENST00000572253 CATSPERBQ9H7T0 1116 aa10.83□□□□□ -0.68
CCDC40-207ENST00000572253 ANLNQ9NQW6 1124 aa10.83□□□□□ -0.68
CCDC40-207ENST00000572253 TBC1D13Q9NVG8 400 aa10.83□□□□□ -0.68
CCDC40-207ENST00000572253 A0A0J9YVX5 310 aa10.83□□□□□ -0.68
CCDC40-207ENST00000572253 TIPRLO75663 272 aa10.83□□□□□ -0.68
CCDC40-207ENST00000572253 BMP10O95393 424 aa10.83□□□□□ -0.68
CCDC40-207ENST00000572253 MT-CYBP00156 380 aaPredicted RBP10.83□□□□□ -0.68
CCDC40-207ENST00000572253 PCSK6P29122 969 aa10.83□□□□□ -0.68
CCDC40-207ENST00000572253 GRIA3P42263 894 aa10.83□□□□□ -0.68
CCDC40-207ENST00000572253 GALK1P51570 392 aa10.83□□□□□ -0.68
CCDC40-207ENST00000572253 TBCELQ5QJ74 424 aa10.83□□□□□ -0.68
CCDC40-207ENST00000572253 IRAK1BP1Q5VVH5 260 aa10.83□□□□□ -0.68
CCDC40-207ENST00000572253 TIGD7Q6NT04 549 aaPredicted RBP10.83□□□□□ -0.68
CCDC40-207ENST00000572253 RAB44Q7Z6P3 723 aaPredicted RBP10.83□□□□□ -0.68
CCDC40-207ENST00000572253 ZNF786Q8N393 782 aa10.83□□□□□ -0.68
CCDC40-207ENST00000572253 PHF21BQ96EK2 531 aa10.83□□□□□ -0.68
CCDC40-207ENST00000572253 UHRF1Q96T88 793 aaPredicted RBP10.83□□□□□ -0.68
CCDC40-207ENST00000572253 TUBA8Q9NY65 449 aaPredicted RBP10.83□□□□□ -0.68
CCDC40-207ENST00000572253 GJD2Q9UKL4 321 aa10.83□□□□□ -0.68
CCDC40-207ENST00000572253 PTCH2Q9Y6C5 1203 aa10.83□□□□□ -0.68
CCDC40-207ENST00000572253 RNF103-CHMP3A0A140T963 221 aa10.83□□□□□ -0.68
CCDC40-207ENST00000572253 RBM47A0AV96 593 aaKnown RBP10.83□□□□□ -0.68
CCDC40-207ENST00000572253 SAC3D1A6NKF1 404 aa10.83□□□□□ -0.68
CCDC40-207ENST00000572253 GPR32O75388 356 aa10.83□□□□□ -0.68
CCDC40-207ENST00000572253 MMP3P08254 477 aa10.83□□□□□ -0.68
CCDC40-207ENST00000572253 ACADVLP49748 655 aa10.83□□□□□ -0.68
CCDC40-207ENST00000572253 RPS6KA2Q15349 733 aa10.83□□□□□ -0.68
CCDC40-207ENST00000572253 BTBD8Q5XKL5 378 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms