RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 C10orf88Q9H8K7 445 aa13.96□□□□□ -0.18
RPAIN-209ENST00000571558 USP29Q9HBJ7 922 aa13.96□□□□□ -0.18
RPAIN-209ENST00000571558 CHD5Q8TDI0 1954 aa13.95□□□□□ -0.18
RPAIN-209ENST00000571558 A0A1B0GVT2 93 aa13.95□□□□□ -0.18
RPAIN-209ENST00000571558 HACD1B0YJ81 288 aa13.95□□□□□ -0.18
RPAIN-209ENST00000571558 RASA4BC9J798 803 aa13.95□□□□□ -0.18
RPAIN-209ENST00000571558 RRP8O43159 456 aaKnown RBP13.95□□□□□ -0.18
RPAIN-209ENST00000571558 RASA4O43374 803 aa13.95□□□□□ -0.18
RPAIN-209ENST00000571558 C1QL1O75973 258 aa13.95□□□□□ -0.18
RPAIN-209ENST00000571558 SLU7O95391 586 aaKnown RBP13.95□□□□□ -0.18
RPAIN-209ENST00000571558 RHOCP08134 193 aa13.95□□□□□ -0.18
RPAIN-209ENST00000571558 C1SP09871 688 aa13.95□□□□□ -0.18
RPAIN-209ENST00000571558 HNF1BP35680 557 aa13.95□□□□□ -0.18
RPAIN-209ENST00000571558 ACVRL1P37023 503 aa13.95□□□□□ -0.18
RPAIN-209ENST00000571558 EIF2S3P41091 472 aaKnown RBP13.95□□□□□ -0.18
RPAIN-209ENST00000571558 CSNK1EP49674 416 aaKnown RBP13.95□□□□□ -0.18
RPAIN-209ENST00000571558 CCT8P50990 548 aa13.95□□□□□ -0.18
RPAIN-209ENST00000571558 PPIDQ08752 370 aaKnown RBP13.95□□□□□ -0.18
RPAIN-209ENST00000571558 POLD3Q15054 466 aaPredicted RBP13.95□□□□□ -0.18
RPAIN-209ENST00000571558 RNF219Q5W0B1 726 aaPredicted RBP13.95□□□□□ -0.18
RPAIN-209ENST00000571558 ARHGAP36Q6ZRI8 547 aa13.95□□□□□ -0.18
RPAIN-209ENST00000571558 B4GALNT4Q76KP1 1039 aa13.95□□□□□ -0.18
RPAIN-209ENST00000571558 KIAA0907Q7Z7F0 614 aaPredicted RBP13.95□□□□□ -0.18
RPAIN-209ENST00000571558 KLHL7Q8IXQ5 586 aa13.95□□□□□ -0.18
RPAIN-209ENST00000571558 LRRN4Q8WUT4 740 aa13.95□□□□□ -0.18
RPAIN-209ENST00000571558 FATE1Q969F0 183 aa13.95□□□□□ -0.18
RPAIN-209ENST00000571558 RTP4Q96DX8 246 aa13.95□□□□□ -0.18
RPAIN-209ENST00000571558 CRELD1Q96HD1 420 aa13.95□□□□□ -0.18
RPAIN-209ENST00000571558 DCBLD2Q96PD2 775 aa13.95□□□□□ -0.18
RPAIN-209ENST00000571558 FEM1AQ9BSK4 669 aa13.95□□□□□ -0.18
RPAIN-209ENST00000571558 ACE2Q9BYF1 805 aaPredicted RBP13.95□□□□□ -0.18
RPAIN-209ENST00000571558 SLC2A11Q9BYW1 496 aa13.95□□□□□ -0.18
RPAIN-209ENST00000571558 TEX51A0A1B0GUA7 166 aa13.94□□□□□ -0.18
RPAIN-209ENST00000571558 H7C0C1 242 aa13.94□□□□□ -0.18
RPAIN-209ENST00000571558 PPP1R12AO14974 1030 aaPredicted RBP13.94□□□□□ -0.18
RPAIN-209ENST00000571558 TIMM44O43615 452 aa13.94□□□□□ -0.18
RPAIN-209ENST00000571558 PEX11BO96011 259 aa13.94□□□□□ -0.18
RPAIN-209ENST00000571558 PLA2G2AP14555 144 aa13.94□□□□□ -0.18
RPAIN-209ENST00000571558 VAV1P15498 845 aa13.94□□□□□ -0.18
RPAIN-209ENST00000571558 MZF1P28698 734 aaPredicted RBP13.94□□□□□ -0.18
RPAIN-209ENST00000571558 ATP5OP48047 213 aa13.94□□□□□ -0.18
RPAIN-209ENST00000571558 PLK1P53350 603 aa13.94□□□□□ -0.18
RPAIN-209ENST00000571558 CDH18Q13634 790 aa13.94□□□□□ -0.18
RPAIN-209ENST00000571558 KIF19Q2TAC6 998 aa13.94□□□□□ -0.18
RPAIN-209ENST00000571558 CDKL3Q8IVW4 592 aaPredicted RBP13.94□□□□□ -0.18
RPAIN-209ENST00000571558 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.94□□□□□ -0.18
RPAIN-209ENST00000571558 OR7D4Q8NG98 312 aa13.94□□□□□ -0.18
RPAIN-209ENST00000571558 ATL2Q8NHH9 583 aa13.94□□□□□ -0.18
RPAIN-209ENST00000571558 PIP4K2CQ8TBX8 421 aa13.94□□□□□ -0.18
RPAIN-209ENST00000571558 TFB1MQ8WVM0 346 aaKnown RBP13.94□□□□□ -0.18
RPAIN-209ENST00000571558 TMEM121Q9BTD3 319 aa13.94□□□□□ -0.18
RPAIN-209ENST00000571558 AMACRQ9UHK6 382 aa13.94□□□□□ -0.18
RPAIN-209ENST00000571558 BTBD3Q9Y2F9 522 aa13.94□□□□□ -0.18
RPAIN-209ENST00000571558 ANKRD6Q9Y2G4 727 aa13.94□□□□□ -0.18
RPAIN-209ENST00000571558 NEU2Q9Y3R4 380 aa13.94□□□□□ -0.18
RPAIN-209ENST00000571558 RAI2Q9Y5P3 530 aa13.94□□□□□ -0.18
RPAIN-209ENST00000571558 GOLGA4Q13439 2230 aaKnown RBP13.94□□□□□ -0.18
RPAIN-209ENST00000571558 FAM149AA5PLN7 773 aa13.93□□□□□ -0.18
RPAIN-209ENST00000571558 ARHGAP42A6NI28 874 aa13.93□□□□□ -0.18
RPAIN-209ENST00000571558 GOLGA8CPA6NN73 597 aa13.93□□□□□ -0.18
RPAIN-209ENST00000571558 DFFAO00273 331 aa13.93□□□□□ -0.18
RPAIN-209ENST00000571558 ZMPSTE24O75844 475 aa13.93□□□□□ -0.18
RPAIN-209ENST00000571558 PRB1P04280 392 aa13.93□□□□□ -0.18
RPAIN-209ENST00000571558 CCNCP24863 283 aa13.93□□□□□ -0.18
RPAIN-209ENST00000571558 RBL1P28749 1068 aa13.93□□□□□ -0.18
RPAIN-209ENST00000571558 HLA-FP30511 346 aa13.93□□□□□ -0.18
RPAIN-209ENST00000571558 CD70P32970 193 aa13.93□□□□□ -0.18
RPAIN-209ENST00000571558 CSKP41240 450 aa13.93□□□□□ -0.18
RPAIN-209ENST00000571558 IL12RB1P42701 662 aa13.93□□□□□ -0.18
RPAIN-209ENST00000571558 GDF10P55107 478 aa13.93□□□□□ -0.18
RPAIN-209ENST00000571558 OXCT1P55809 520 aa13.93□□□□□ -0.18
RPAIN-209ENST00000571558 SLC12A1Q13621 1099 aa13.93□□□□□ -0.18
RPAIN-209ENST00000571558 DHX34Q14147 1143 aaKnown RBP13.93□□□□□ -0.18
RPAIN-209ENST00000571558 DARS2Q6PI48 645 aaKnown RBP13.93□□□□□ -0.18
RPAIN-209ENST00000571558 ATPAF2Q8N5M1 289 aa13.93□□□□□ -0.18
RPAIN-209ENST00000571558 CCNYQ8ND76 341 aa13.93□□□□□ -0.18
RPAIN-209ENST00000571558 ERLEC1Q96DZ1 483 aa13.93□□□□□ -0.18
RPAIN-209ENST00000571558 RUNDC3BQ96NL0 473 aa13.93□□□□□ -0.18
RPAIN-209ENST00000571558 NRSN2Q9GZP1 204 aa13.93□□□□□ -0.18
RPAIN-209ENST00000571558 PDFQ9HBH1 243 aa13.93□□□□□ -0.18
RPAIN-209ENST00000571558 IPO11Q9UI26 975 aaKnown RBP13.93□□□□□ -0.18
RPAIN-209ENST00000571558 INTS6Q9UL03 887 aaKnown RBP13.93□□□□□ -0.18
RPAIN-209ENST00000571558 ZNF148Q9UQR1 794 aa13.93□□□□□ -0.18
RPAIN-209ENST00000571558 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.93□□□□□ -0.18
RPAIN-209ENST00000571558 SNX11Q9Y5W9 270 aa13.93□□□□□ -0.18
RPAIN-209ENST00000571558 NYNRINQ9P2P1 1898 aaKnown RBP13.93□□□□□ -0.18
RPAIN-209ENST00000571558 CFAP69A5D8W1 941 aa13.92□□□□□ -0.18
RPAIN-209ENST00000571558 BHMG1C9JSJ3 638 aaPredicted RBP13.92□□□□□ -0.18
RPAIN-209ENST00000571558 J3KR12 359 aa13.92□□□□□ -0.18
RPAIN-209ENST00000571558 RAD51CO43502 376 aa13.92□□□□□ -0.18
RPAIN-209ENST00000571558 KDELR3O43731 214 aa13.92□□□□□ -0.18
RPAIN-209ENST00000571558 PRAMEF11O60813 436 aa13.92□□□□□ -0.18
RPAIN-209ENST00000571558 STIP1P31948 543 aaKnown RBP13.92□□□□□ -0.18
RPAIN-209ENST00000571558 ETFBP38117 255 aa13.92□□□□□ -0.18
RPAIN-209ENST00000571558 CLCN6P51797 869 aa13.92□□□□□ -0.18
RPAIN-209ENST00000571558 COPAP53621 1224 aa13.92□□□□□ -0.18
RPAIN-209ENST00000571558 DR1Q01658 176 aa13.92□□□□□ -0.18
RPAIN-209ENST00000571558 ZBTB16Q05516 673 aa13.92□□□□□ -0.18
RPAIN-209ENST00000571558 IL10RBQ08334 325 aa13.92□□□□□ -0.18
RPAIN-209ENST00000571558 WASHC5Q12768 1159 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms