RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 WSCD2Q2TBF2 565 aa8.7□□□□□ -1.02
CTDNEP1-203ENST00000570385 EFHC2Q5JST6 749 aa8.7□□□□□ -1.02
CTDNEP1-203ENST00000570385 C6orf132Q5T0Z8 1188 aa8.7□□□□□ -1.02
CTDNEP1-203ENST00000570385 KCTD16Q68DU8 428 aa8.7□□□□□ -1.02
CTDNEP1-203ENST00000570385 DNAJC24Q6P3W2 148 aa8.7□□□□□ -1.02
CTDNEP1-203ENST00000570385 ENPP7Q6UWV6 458 aa8.7□□□□□ -1.02
CTDNEP1-203ENST00000570385 TRIM72Q6ZMU5 477 aa8.7□□□□□ -1.02
CTDNEP1-203ENST00000570385 ZNF605Q86T29 641 aa8.7□□□□□ -1.02
CTDNEP1-203ENST00000570385 TP53I13Q8NBR0 393 aaPredicted RBP8.7□□□□□ -1.02
CTDNEP1-203ENST00000570385 DENND6BQ8NEG7 585 aa8.7□□□□□ -1.02
CTDNEP1-203ENST00000570385 PCDH19Q8TAB3 1148 aa8.7□□□□□ -1.02
CTDNEP1-203ENST00000570385 ENOX1Q8TC92 643 aaKnown RBP8.7□□□□□ -1.02
CTDNEP1-203ENST00000570385 BTN2A2Q8WVV5 523 aa8.7□□□□□ -1.02
CTDNEP1-203ENST00000570385 ASB12Q8WXK4 309 aa8.7□□□□□ -1.02
CTDNEP1-203ENST00000570385 NTAN1Q96AB6 310 aa8.7□□□□□ -1.02
CTDNEP1-203ENST00000570385 PRR11Q96HE9 360 aaPredicted RBP8.7□□□□□ -1.02
CTDNEP1-203ENST00000570385 CELF6Q96J87 481 aaKnown RBP8.7□□□□□ -1.02
CTDNEP1-203ENST00000570385 SLC46A1Q96NT5 459 aa8.7□□□□□ -1.02
CTDNEP1-203ENST00000570385 MCEEQ96PE7 176 aa8.7□□□□□ -1.02
CTDNEP1-203ENST00000570385 CCDC3Q9BQI4 270 aa8.7□□□□□ -1.02
CTDNEP1-203ENST00000570385 BOCQ9BWV1 1114 aa8.7□□□□□ -1.02
CTDNEP1-203ENST00000570385 SEMA4CQ9C0C4 833 aa8.7□□□□□ -1.02
CTDNEP1-203ENST00000570385 PCDH12Q9NPG4 1184 aa8.7□□□□□ -1.02
CTDNEP1-203ENST00000570385 RABGEF1Q9UJ41 708 aa8.7□□□□□ -1.02
CTDNEP1-203ENST00000570385 SIK3Q9Y2K2 1263 aa8.7□□□□□ -1.02
CTDNEP1-203ENST00000570385 OR1A2Q9Y585 309 aa8.7□□□□□ -1.02
CTDNEP1-203ENST00000570385 LRRK1Q38SD2 2015 aa8.7□□□□□ -1.02
CTDNEP1-203ENST00000570385 PIEZO2Q9H5I5 2752 aa8.69□□□□□ -1.02
CTDNEP1-203ENST00000570385 ZSCAN5CA6NGD5 496 aaPredicted RBP8.69□□□□□ -1.02
CTDNEP1-203ENST00000570385 SIGLEC16A6NMB1 481 aa8.69□□□□□ -1.02
CTDNEP1-203ENST00000570385 A8MX80 341 aa8.69□□□□□ -1.02
CTDNEP1-203ENST00000570385 TMCO5BA8MYB1 307 aa8.69□□□□□ -1.02
CTDNEP1-203ENST00000570385 LZTS3O60299 673 aaPredicted RBP8.69□□□□□ -1.02
CTDNEP1-203ENST00000570385 BUB1BO60566 1050 aaPredicted RBP8.69□□□□□ -1.02
CTDNEP1-203ENST00000570385 CALB1P05937 261 aa8.69□□□□□ -1.02
CTDNEP1-203ENST00000570385 TPM2P07951 284 aa8.69□□□□□ -1.02
CTDNEP1-203ENST00000570385 C6P13671 934 aa8.69□□□□□ -1.02
CTDNEP1-203ENST00000570385 CTSEP14091 401 aa8.69□□□□□ -1.02
CTDNEP1-203ENST00000570385 HGFP14210 728 aa8.69□□□□□ -1.02
CTDNEP1-203ENST00000570385 PLA2G2AP14555 144 aa8.69□□□□□ -1.02
CTDNEP1-203ENST00000570385 RGRP47804 291 aa8.69□□□□□ -1.02
CTDNEP1-203ENST00000570385 PDX1P52945 283 aa8.69□□□□□ -1.02
CTDNEP1-203ENST00000570385 COPB1P53618 953 aaKnown RBP8.69□□□□□ -1.02
CTDNEP1-203ENST00000570385 OGDHQ02218 1023 aa8.69□□□□□ -1.02
CTDNEP1-203ENST00000570385 SERINC3Q13530 473 aa8.69□□□□□ -1.02
CTDNEP1-203ENST00000570385 SPIDRQ14159 915 aa8.69□□□□□ -1.02
CTDNEP1-203ENST00000570385 INPP5AQ14642 412 aa8.69□□□□□ -1.02
CTDNEP1-203ENST00000570385 LRRC14Q15048 493 aa8.69□□□□□ -1.02
CTDNEP1-203ENST00000570385 ZSCAN23Q3MJ62 389 aa8.69□□□□□ -1.02
CTDNEP1-203ENST00000570385 CFAP58Q5T655 872 aa8.69□□□□□ -1.02
CTDNEP1-203ENST00000570385 CDKAL1Q5VV42 579 aa8.69□□□□□ -1.02
CTDNEP1-203ENST00000570385 KIAA1614Q5VZ46 1190 aa8.69□□□□□ -1.02
CTDNEP1-203ENST00000570385 ESRP1Q6NXG1 681 aaKnown RBP8.69□□□□□ -1.02
CTDNEP1-203ENST00000570385 MACC1Q6ZN28 852 aa8.69□□□□□ -1.02
CTDNEP1-203ENST00000570385 MON1BQ7L1V2 547 aa8.69□□□□□ -1.02
CTDNEP1-203ENST00000570385 B3GNT8Q7Z7M8 397 aa8.69□□□□□ -1.02
CTDNEP1-203ENST00000570385 ZSCAN30Q86W11 494 aa8.69□□□□□ -1.02
CTDNEP1-203ENST00000570385 ZSWIM9Q86XI8 627 aa8.69□□□□□ -1.02
CTDNEP1-203ENST00000570385 DNAAF5Q86Y56 855 aa8.69□□□□□ -1.02
CTDNEP1-203ENST00000570385 PHF13Q86YI8 300 aaPredicted RBP8.69□□□□□ -1.02
CTDNEP1-203ENST00000570385 CAMK1DQ8IU85 385 aa8.69□□□□□ -1.02
CTDNEP1-203ENST00000570385 SFTPA2Q8IWL1 248 aa8.69□□□□□ -1.02
CTDNEP1-203ENST00000570385 Q8N9G6 341 aaPredicted RBP8.69□□□□□ -1.02
CTDNEP1-203ENST00000570385 KYQ8NBH2 561 aa8.69□□□□□ -1.02
CTDNEP1-203ENST00000570385 C3orf20Q8ND61 904 aa8.69□□□□□ -1.02
CTDNEP1-203ENST00000570385 NEK11Q8NG66 645 aa8.69□□□□□ -1.02
CTDNEP1-203ENST00000570385 TPCN2Q8NHX9 752 aa8.69□□□□□ -1.02
CTDNEP1-203ENST00000570385 GLMNQ92990 594 aa8.69□□□□□ -1.02
CTDNEP1-203ENST00000570385 CCDC74AQ96AQ1 378 aa8.69□□□□□ -1.02
CTDNEP1-203ENST00000570385 AGPAT1Q99943 283 aa8.69□□□□□ -1.02
CTDNEP1-203ENST00000570385 C1QTNF7Q9BXJ2 289 aa8.69□□□□□ -1.02
CTDNEP1-203ENST00000570385 FOXP3Q9BZS1 431 aa8.69□□□□□ -1.02
CTDNEP1-203ENST00000570385 SUV39H2Q9H5I1 410 aa8.69□□□□□ -1.02
CTDNEP1-203ENST00000570385 NCKIPSDQ9NZQ3 722 aa8.69□□□□□ -1.02
CTDNEP1-203ENST00000570385 DKK3Q9UBP4 350 aa8.69□□□□□ -1.02
CTDNEP1-203ENST00000570385 UBA2Q9UBT2 640 aaPredicted RBP8.69□□□□□ -1.02
CTDNEP1-203ENST00000570385 FZD10Q9ULW2 581 aa8.69□□□□□ -1.02
CTDNEP1-203ENST00000570385 GPR34Q9UPC5 381 aa8.69□□□□□ -1.02
CTDNEP1-203ENST00000570385 DAAM1Q9Y4D1 1078 aa8.69□□□□□ -1.02
CTDNEP1-203ENST00000570385 SETXQ7Z333 2677 aaKnown RBP8.69□□□□□ -1.02
CTDNEP1-203ENST00000570385 SPTA1P02549 2419 aa8.69□□□□□ -1.02
CTDNEP1-203ENST00000570385 CFAP46Q8IYW2 2715 aa8.68□□□□□ -1.02
CTDNEP1-203ENST00000570385 COL27A1Q8IZC6 1860 aaPredicted RBP8.68□□□□□ -1.02
CTDNEP1-203ENST00000570385 ARHGEF17Q96PE2 2063 aaPredicted RBP8.68□□□□□ -1.02
CTDNEP1-203ENST00000570385 CXorf51AA0A1B0GTR3 108 aa8.68□□□□□ -1.02
CTDNEP1-203ENST00000570385 TCRBV5S1A1TA0A578 114 aa8.68□□□□□ -1.02
CTDNEP1-203ENST00000570385 TTC24A2A3L6 582 aaPredicted RBP8.68□□□□□ -1.02
CTDNEP1-203ENST00000570385 ANKRD62A6NC57 917 aa8.68□□□□□ -1.02
CTDNEP1-203ENST00000570385 ATMINO43313 823 aaPredicted RBP8.68□□□□□ -1.02
CTDNEP1-203ENST00000570385 RASGRP1O95267 797 aa8.68□□□□□ -1.02
CTDNEP1-203ENST00000570385 RPLP0P05388 317 aaKnown RBP8.68□□□□□ -1.02
CTDNEP1-203ENST00000570385 LIG3P49916 1009 aa8.68□□□□□ -1.02
CTDNEP1-203ENST00000570385 PAPOLAP51003 745 aaKnown RBP8.68□□□□□ -1.02
CTDNEP1-203ENST00000570385 ZNF143P52747 638 aaPredicted RBP8.68□□□□□ -1.02
CTDNEP1-203ENST00000570385 HK3P52790 923 aa8.68□□□□□ -1.02
CTDNEP1-203ENST00000570385 YBEYP58557 167 aaPredicted RBP8.68□□□□□ -1.02
CTDNEP1-203ENST00000570385 TPI1P60174 286 aa8.68□□□□□ -1.02
CTDNEP1-203ENST00000570385 SRP54P61011 504 aaKnown RBP8.68□□□□□ -1.02
CTDNEP1-203ENST00000570385 YPEL5P62699 121 aa8.68□□□□□ -1.02
CTDNEP1-203ENST00000570385 CCL7P80098 99 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms