RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 B4DGG1 531 aa10.55□□□□□ -0.72
CTDNEP1-202ENST00000570380 TNFP01375 233 aa10.55□□□□□ -0.72
CTDNEP1-202ENST00000570380 UGT2B4P06133 528 aa10.55□□□□□ -0.72
CTDNEP1-202ENST00000570380 ME1P48163 572 aa10.55□□□□□ -0.72
CTDNEP1-202ENST00000570380 SLC20A2Q08357 652 aa10.55□□□□□ -0.72
CTDNEP1-202ENST00000570380 NME3Q13232 169 aa10.55□□□□□ -0.72
CTDNEP1-202ENST00000570380 MTA1Q13330 715 aa10.55□□□□□ -0.72
CTDNEP1-202ENST00000570380 SEPT6Q14141 434 aa10.55□□□□□ -0.72
CTDNEP1-202ENST00000570380 WSCD2Q2TBF2 565 aa10.55□□□□□ -0.72
CTDNEP1-202ENST00000570380 ARTNQ5T4W7 220 aa10.55□□□□□ -0.72
CTDNEP1-202ENST00000570380 ATP1A1-AS1Q5TC04 95 aa10.55□□□□□ -0.72
CTDNEP1-202ENST00000570380 TAF8Q7Z7C8 310 aa10.55□□□□□ -0.72
CTDNEP1-202ENST00000570380 TTC7BQ86TV6 843 aa10.55□□□□□ -0.72
CTDNEP1-202ENST00000570380 PLPP6Q8IY26 295 aa10.55□□□□□ -0.72
CTDNEP1-202ENST00000570380 SRRM1Q8IYB3 904 aaKnown RBP10.55□□□□□ -0.72
CTDNEP1-202ENST00000570380 UNC5BQ8IZJ1 945 aa10.55□□□□□ -0.72
CTDNEP1-202ENST00000570380 PPM1KQ8N3J5 372 aa10.55□□□□□ -0.72
CTDNEP1-202ENST00000570380 RYBPQ8N488 228 aaPredicted RBP10.55□□□□□ -0.72
CTDNEP1-202ENST00000570380 ARHGEF26Q96DR7 871 aa10.55□□□□□ -0.72
CTDNEP1-202ENST00000570380 PDXPQ96GD0 296 aa10.55□□□□□ -0.72
CTDNEP1-202ENST00000570380 KLHL32Q96NJ5 620 aa10.55□□□□□ -0.72
CTDNEP1-202ENST00000570380 NT5C1BQ96P26 610 aa10.55□□□□□ -0.72
CTDNEP1-202ENST00000570380 APOOQ9BUR5 198 aa10.55□□□□□ -0.72
CTDNEP1-202ENST00000570380 SPRY4Q9C004 299 aa10.55□□□□□ -0.72
CTDNEP1-202ENST00000570380 KLQ9UEF7 1012 aa10.55□□□□□ -0.72
CTDNEP1-202ENST00000570380 PILRAQ9UKJ1 303 aa10.55□□□□□ -0.72
CTDNEP1-202ENST00000570380 COQ6Q9Y2Z9 468 aa10.55□□□□□ -0.72
CTDNEP1-202ENST00000570380 OR1A2Q9Y585 309 aa10.55□□□□□ -0.72
CTDNEP1-202ENST00000570380 DGKBQ9Y6T7 804 aa10.55□□□□□ -0.72
CTDNEP1-202ENST00000570380 PRRC2CQ9Y520 2896 aaKnown RBP10.55□□□□□ -0.72
CTDNEP1-202ENST00000570380 OTOGQ6ZRI0 2925 aa10.54□□□□□ -0.72
CTDNEP1-202ENST00000570380 KRIT1O00522 736 aa10.54□□□□□ -0.72
CTDNEP1-202ENST00000570380 CETN3O15182 167 aa10.54□□□□□ -0.72
CTDNEP1-202ENST00000570380 GRAP2O75791 330 aa10.54□□□□□ -0.72
CTDNEP1-202ENST00000570380 CLDN1O95832 211 aa10.54□□□□□ -0.72
CTDNEP1-202ENST00000570380 MYL1P05976 194 aa10.54□□□□□ -0.72
CTDNEP1-202ENST00000570380 HTR1BP28222 390 aa10.54□□□□□ -0.72
CTDNEP1-202ENST00000570380 ALDH4A1P30038 563 aa10.54□□□□□ -0.72
CTDNEP1-202ENST00000570380 OR1E1P30953 314 aa10.54□□□□□ -0.72
CTDNEP1-202ENST00000570380 LIMK2P53671 638 aa10.54□□□□□ -0.72
CTDNEP1-202ENST00000570380 INPP5AQ14642 412 aa10.54□□□□□ -0.72
CTDNEP1-202ENST00000570380 LRRC14Q15048 493 aa10.54□□□□□ -0.72
CTDNEP1-202ENST00000570380 SPECC1LQ69YQ0 1117 aa10.54□□□□□ -0.72
CTDNEP1-202ENST00000570380 TCTN3Q6NUS6 607 aa10.54□□□□□ -0.72
CTDNEP1-202ENST00000570380 FOXR2Q6PJQ5 311 aa10.54□□□□□ -0.72
CTDNEP1-202ENST00000570380 MAMDC2Q7Z304 686 aaPredicted RBP10.54□□□□□ -0.72
CTDNEP1-202ENST00000570380 IRF2BP1Q8IU81 584 aa10.54□□□□□ -0.72
CTDNEP1-202ENST00000570380 FAM114A1Q8IWE2 563 aa10.54□□□□□ -0.72
CTDNEP1-202ENST00000570380 CXorf40AQ8TE69 158 aa10.54□□□□□ -0.72
CTDNEP1-202ENST00000570380 OR1E3Q8WZA6 343 aa10.54□□□□□ -0.72
CTDNEP1-202ENST00000570380 SLC35C1Q96A29 364 aa10.54□□□□□ -0.72
CTDNEP1-202ENST00000570380 WDR92Q96MX6 357 aa10.54□□□□□ -0.72
CTDNEP1-202ENST00000570380 HAPLN3Q96S86 360 aa10.54□□□□□ -0.72
CTDNEP1-202ENST00000570380 WRAP53Q9BUR4 548 aaKnown RBP10.54□□□□□ -0.72
CTDNEP1-202ENST00000570380 ASPSCR1Q9BZE9 553 aa10.54□□□□□ -0.72
CTDNEP1-202ENST00000570380 DPEP2Q9H4A9 486 aa10.54□□□□□ -0.72
CTDNEP1-202ENST00000570380 ZNF768Q9H5H4 540 aaKnown RBP10.54□□□□□ -0.72
CTDNEP1-202ENST00000570380 ATP13A1Q9HD20 1204 aa10.54□□□□□ -0.72
CTDNEP1-202ENST00000570380 MRPL40Q9NQ50 206 aaKnown RBP10.54□□□□□ -0.72
CTDNEP1-202ENST00000570380 OCIAD1Q9NX40 245 aa10.54□□□□□ -0.72
CTDNEP1-202ENST00000570380 ARHGEF38Q9NXL2 777 aa10.54□□□□□ -0.72
CTDNEP1-202ENST00000570380 SLC39A1Q9NY26 324 aa10.54□□□□□ -0.72
CTDNEP1-202ENST00000570380 ZNF212Q9UDV6 495 aa10.54□□□□□ -0.72
CTDNEP1-202ENST00000570380 KCNMB2Q9Y691 235 aa10.54□□□□□ -0.72
CTDNEP1-202ENST00000570380 ITPR3Q14573 2671 aa10.54□□□□□ -0.72
CTDNEP1-202ENST00000570380 ILVBLA1L0T0 632 aa10.53□□□□□ -0.72
CTDNEP1-202ENST00000570380 TTLL8A6PVC2 850 aa10.53□□□□□ -0.72
CTDNEP1-202ENST00000570380 HSF2BPO75031 334 aa10.53□□□□□ -0.72
CTDNEP1-202ENST00000570380 DDAH2O95865 285 aa10.53□□□□□ -0.72
CTDNEP1-202ENST00000570380 GLI1P08151 1106 aa10.53□□□□□ -0.72
CTDNEP1-202ENST00000570380 CD1CP29017 333 aa10.53□□□□□ -0.72
CTDNEP1-202ENST00000570380 MAZP56270 477 aaKnown RBP10.53□□□□□ -0.72
CTDNEP1-202ENST00000570380 CLPPQ16740 277 aaPredicted RBP10.53□□□□□ -0.72
CTDNEP1-202ENST00000570380 FOXD4L6Q3SYB3 417 aaPredicted RBP10.53□□□□□ -0.72
CTDNEP1-202ENST00000570380 CRTC2Q53ET0 693 aaPredicted RBP10.53□□□□□ -0.72
CTDNEP1-202ENST00000570380 DCAF12Q5T6F0 453 aa10.53□□□□□ -0.72
CTDNEP1-202ENST00000570380 OTUD1Q5VV17 481 aaPredicted RBP10.53□□□□□ -0.72
CTDNEP1-202ENST00000570380 ANKS6Q68DC2 871 aa10.53□□□□□ -0.72
CTDNEP1-202ENST00000570380 C16orf46Q6P387 395 aa10.53□□□□□ -0.72
CTDNEP1-202ENST00000570380 FOXD4L3Q6VB84 417 aaPredicted RBP10.53□□□□□ -0.72
CTDNEP1-202ENST00000570380 ASB18Q6ZVZ8 466 aa10.53□□□□□ -0.72
CTDNEP1-202ENST00000570380 RRAGAQ7L523 313 aa10.53□□□□□ -0.72
CTDNEP1-202ENST00000570380 TIPARPQ7Z3E1 657 aaKnown RBP10.53□□□□□ -0.72
CTDNEP1-202ENST00000570380 ZNF438Q7Z4V0 828 aa10.53□□□□□ -0.72
CTDNEP1-202ENST00000570380 C17orf82Q86X59 251 aaPredicted RBP10.53□□□□□ -0.72
CTDNEP1-202ENST00000570380 CCDC13Q8IYE1 715 aa10.53□□□□□ -0.72
CTDNEP1-202ENST00000570380 NLGN4XQ8N0W4 816 aa10.53□□□□□ -0.72
CTDNEP1-202ENST00000570380 EFCAB3Q8N7B9 438 aa10.53□□□□□ -0.72
CTDNEP1-202ENST00000570380 AGBL5Q8NDL9 886 aa10.53□□□□□ -0.72
CTDNEP1-202ENST00000570380 CCDC112Q8NEF3 446 aa10.53□□□□□ -0.72
CTDNEP1-202ENST00000570380 NLGN4YQ8NFZ3 816 aaPredicted RBP10.53□□□□□ -0.72
CTDNEP1-202ENST00000570380 CCL4L1Q8NHW4 92 aa10.53□□□□□ -0.72
CTDNEP1-202ENST00000570380 CPT1CQ8TCG5 803 aa10.53□□□□□ -0.72
CTDNEP1-202ENST00000570380 CCDC47Q96A33 483 aaKnown RBP10.53□□□□□ -0.72
CTDNEP1-202ENST00000570380 KIAA1143Q96AT1 154 aaPredicted RBP10.53□□□□□ -0.72
CTDNEP1-202ENST00000570380 ISG20Q96AZ6 181 aaKnown RBP10.53□□□□□ -0.72
CTDNEP1-202ENST00000570380 TKTL2Q9H0I9 626 aa10.53□□□□□ -0.72
CTDNEP1-202ENST00000570380 TMEM168Q9H0V1 697 aa10.53□□□□□ -0.72
CTDNEP1-202ENST00000570380 METTL14Q9HCE5 456 aaKnown RBP10.53□□□□□ -0.72
CTDNEP1-202ENST00000570380 PIGVQ9NUD9 493 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms