RNA–Protein interactions for RNA: ENST00000570129.1

GTF3C1-212, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-212ENST00000570129 GATAD2AQ86YP4 633 aa9.9□□□□□ -0.82
GTF3C1-212ENST00000570129 KATNAL2Q8IYT4 538 aa9.9□□□□□ -0.82
GTF3C1-212ENST00000570129 PLA2G15Q8NCC3 412 aa9.9□□□□□ -0.82
GTF3C1-212ENST00000570129 DEFB124Q8NES8 71 aa9.9□□□□□ -0.82
GTF3C1-212ENST00000570129 OR13H1Q8NG92 308 aa9.9□□□□□ -0.82
GTF3C1-212ENST00000570129 SPATA22Q8NHS9 363 aa9.9□□□□□ -0.82
GTF3C1-212ENST00000570129 KIAA1524Q8TCG1 905 aa9.9□□□□□ -0.82
GTF3C1-212ENST00000570129 PDCD6IPQ8WUM4 868 aaKnown RBP9.9□□□□□ -0.82
GTF3C1-212ENST00000570129 CCDC114Q96M63 670 aa9.9□□□□□ -0.82
GTF3C1-212ENST00000570129 OLFM3Q96PB7 478 aa9.9□□□□□ -0.82
GTF3C1-212ENST00000570129 TSGA13Q96PP4 275 aa9.9□□□□□ -0.82
GTF3C1-212ENST00000570129 C1QTNF2Q9BXJ5 285 aa9.9□□□□□ -0.82
GTF3C1-212ENST00000570129 NUSAP1Q9BXS6 441 aaKnown RBP9.9□□□□□ -0.82
GTF3C1-212ENST00000570129 SLC17A9Q9BYT1 436 aa9.9□□□□□ -0.82
GTF3C1-212ENST00000570129 CPEB1Q9BZB8 566 aaKnown RBP9.9□□□□□ -0.82
GTF3C1-212ENST00000570129 GAREM1Q9H706 876 aa9.9□□□□□ -0.82
GTF3C1-212ENST00000570129 TMEM9BQ9NQ34 198 aa9.9□□□□□ -0.82
GTF3C1-212ENST00000570129 SCUBE2Q9NQ36 999 aa9.9□□□□□ -0.82
GTF3C1-212ENST00000570129 DYRK4Q9NR20 520 aa9.9□□□□□ -0.82
GTF3C1-212ENST00000570129 SEPT3Q9UH03 358 aa9.9□□□□□ -0.82
GTF3C1-212ENST00000570129 KLF15Q9UIH9 416 aa9.9□□□□□ -0.82
GTF3C1-212ENST00000570129 GUCA1BQ9UMX6 200 aa9.9□□□□□ -0.82
GTF3C1-212ENST00000570129 R3HDM2Q9Y2K5 976 aaKnown RBP9.9□□□□□ -0.82
GTF3C1-212ENST00000570129 TTLL3Q9Y4R7 772 aa9.9□□□□□ -0.82
GTF3C1-212ENST00000570129 CACNA1AO00555 2505 aa9.9□□□□□ -0.83
GTF3C1-212ENST00000570129 PLXNA2O75051 1894 aa9.89□□□□□ -0.83
GTF3C1-212ENST00000570129 CABIN1Q9Y6J0 2220 aa9.89□□□□□ -0.83
GTF3C1-212ENST00000570129 SPAARA0A1B0GVQ0 90 aa9.89□□□□□ -0.83
GTF3C1-212ENST00000570129 TSPAN11A1L157 253 aa9.89□□□□□ -0.83
GTF3C1-212ENST00000570129 K7ESM1 405 aa9.89□□□□□ -0.83
GTF3C1-212ENST00000570129 TLR4O00206 839 aa9.89□□□□□ -0.83
GTF3C1-212ENST00000570129 RIOK3O14730 519 aaKnown RBP9.89□□□□□ -0.83
GTF3C1-212ENST00000570129 SLC7A4O43246 635 aa9.89□□□□□ -0.83
GTF3C1-212ENST00000570129 PSTPIP1O43586 416 aa9.89□□□□□ -0.83
GTF3C1-212ENST00000570129 ZRANB2O95218 330 aaKnown RBP eCLIP9.89□□□□□ -0.83
GTF3C1-212ENST00000570129 CTNNA2P26232 953 aa9.89□□□□□ -0.83
GTF3C1-212ENST00000570129 CD68P34810 354 aaPredicted RBP9.89□□□□□ -0.83
GTF3C1-212ENST00000570129 CTNNA1P35221 906 aaKnown RBP9.89□□□□□ -0.83
GTF3C1-212ENST00000570129 CSNK1DP48730 415 aa9.89□□□□□ -0.83
GTF3C1-212ENST00000570129 LIG3P49916 1009 aa9.89□□□□□ -0.83
GTF3C1-212ENST00000570129 ZNF135P52742 658 aaPredicted RBP9.89□□□□□ -0.83
GTF3C1-212ENST00000570129 AP1B1Q10567 949 aa9.89□□□□□ -0.83
GTF3C1-212ENST00000570129 WASHC5Q12768 1159 aa9.89□□□□□ -0.83
GTF3C1-212ENST00000570129 OLIG2Q13516 323 aa9.89□□□□□ -0.83
GTF3C1-212ENST00000570129 ZNF235Q14590 738 aa9.89□□□□□ -0.83
GTF3C1-212ENST00000570129 TCEA2Q15560 299 aa9.89□□□□□ -0.83
GTF3C1-212ENST00000570129 UGP2Q16851 508 aa9.89□□□□□ -0.83
GTF3C1-212ENST00000570129 WSCD2Q2TBF2 565 aa9.89□□□□□ -0.83
GTF3C1-212ENST00000570129 ADAT2Q7Z6V5 191 aaKnown RBP9.89□□□□□ -0.83
GTF3C1-212ENST00000570129 PRUNE1Q86TP1 453 aa9.89□□□□□ -0.83
GTF3C1-212ENST00000570129 PRPF39Q86UA1 669 aaKnown RBP9.89□□□□□ -0.83
GTF3C1-212ENST00000570129 ZC3H18Q86VM9 953 aaKnown RBP9.89□□□□□ -0.83
GTF3C1-212ENST00000570129 TRIM69Q86WT6 500 aa9.89□□□□□ -0.83
GTF3C1-212ENST00000570129 MARCH9Q86YJ5 346 aa9.89□□□□□ -0.83
GTF3C1-212ENST00000570129 CCDC50Q8IVM0 306 aa9.89□□□□□ -0.83
GTF3C1-212ENST00000570129 MAP7D3Q8IWC1 876 aa9.89□□□□□ -0.83
GTF3C1-212ENST00000570129 CCDC13Q8IYE1 715 aa9.89□□□□□ -0.83
GTF3C1-212ENST00000570129 RCOR2Q8IZ40 523 aa9.89□□□□□ -0.83
GTF3C1-212ENST00000570129 SLC22A18ASQ8N1D0 253 aa9.89□□□□□ -0.83
GTF3C1-212ENST00000570129 TMEM145Q8NBT3 493 aa9.89□□□□□ -0.83
GTF3C1-212ENST00000570129 PIH1D2Q8WWB5 315 aa9.89□□□□□ -0.83
GTF3C1-212ENST00000570129 CASKIN2Q8WXE0 1202 aa9.89□□□□□ -0.83
GTF3C1-212ENST00000570129 ECHDC3Q96DC8 303 aa9.89□□□□□ -0.83
GTF3C1-212ENST00000570129 ZNF599Q96NL3 588 aa9.89□□□□□ -0.83
GTF3C1-212ENST00000570129 AGAP3Q96P47 875 aa9.89□□□□□ -0.83
GTF3C1-212ENST00000570129 NUDCD1Q96RS6 583 aa9.89□□□□□ -0.83
GTF3C1-212ENST00000570129 IL12RB2Q99665 862 aa9.89□□□□□ -0.83
GTF3C1-212ENST00000570129 MGME1Q9BQP7 344 aa9.89□□□□□ -0.83
GTF3C1-212ENST00000570129 MAK16Q9BXY0 300 aaKnown RBP9.89□□□□□ -0.83
GTF3C1-212ENST00000570129 TCEAL2Q9H3H9 227 aaPredicted RBP9.89□□□□□ -0.83
GTF3C1-212ENST00000570129 PREBQ9HCU5 417 aa9.89□□□□□ -0.83
GTF3C1-212ENST00000570129 LZTFL1Q9NQ48 299 aa9.89□□□□□ -0.83
GTF3C1-212ENST00000570129 DDX56Q9NY93 547 aaKnown RBP9.89□□□□□ -0.83
GTF3C1-212ENST00000570129 UBP1Q9NZI7 540 aa9.89□□□□□ -0.83
GTF3C1-212ENST00000570129 CDV3Q9UKY7 258 aaKnown RBP9.89□□□□□ -0.83
GTF3C1-212ENST00000570129 CHKBQ9Y259 395 aa9.89□□□□□ -0.83
GTF3C1-212ENST00000570129 ATP8A1Q9Y2Q0 1164 aa9.89□□□□□ -0.83
GTF3C1-212ENST00000570129 PCDHB9Q9Y5E1 797 aa9.89□□□□□ -0.83
GTF3C1-212ENST00000570129 RAI2Q9Y5P3 530 aa9.89□□□□□ -0.83
GTF3C1-212ENST00000570129 CXorf51AA0A1B0GTR3 108 aa9.88□□□□□ -0.83
GTF3C1-212ENST00000570129 UPK3BL1B0FP48 263 aa9.88□□□□□ -0.83
GTF3C1-212ENST00000570129 UPK3BL2E5RIL1 263 aa9.88□□□□□ -0.83
GTF3C1-212ENST00000570129 NEMP1O14524 444 aa9.88□□□□□ -0.83
GTF3C1-212ENST00000570129 VILLO15195 856 aa9.88□□□□□ -0.83
GTF3C1-212ENST00000570129 CASC3O15234 703 aaKnown RBP9.88□□□□□ -0.83
GTF3C1-212ENST00000570129 HTRA2O43464 458 aaPredicted RBP9.88□□□□□ -0.83
GTF3C1-212ENST00000570129 SDC3O75056 442 aa9.88□□□□□ -0.83
GTF3C1-212ENST00000570129 PIRTP0C851 137 aa9.88□□□□□ -0.83
GTF3C1-212ENST00000570129 GNSP15586 552 aa9.88□□□□□ -0.83
GTF3C1-212ENST00000570129 LHCGRP22888 699 aa9.88□□□□□ -0.83
GTF3C1-212ENST00000570129 CCNCP24863 283 aa9.88□□□□□ -0.83
GTF3C1-212ENST00000570129 PTPN3P26045 913 aa9.88□□□□□ -0.83
GTF3C1-212ENST00000570129 CD38P28907 300 aa9.88□□□□□ -0.83
GTF3C1-212ENST00000570129 IGFALSP35858 605 aa9.88□□□□□ -0.83
GTF3C1-212ENST00000570129 CD86P42081 329 aa9.88□□□□□ -0.83
GTF3C1-212ENST00000570129 AFF3P51826 1226 aaKnown RBP9.88□□□□□ -0.83
GTF3C1-212ENST00000570129 NXPH1P58417 271 aa9.88□□□□□ -0.83
GTF3C1-212ENST00000570129 RACK1P63244 317 aaKnown RBP9.88□□□□□ -0.83
GTF3C1-212ENST00000570129 SKOR1P84550 965 aa9.88□□□□□ -0.83
GTF3C1-212ENST00000570129 BCL2L1Q07817 233 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms