RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 PIK3C2AO00443 1686 aa3.94□□□□□ -1.78
UBR1-211ENST00000569971 USP54Q70EL1 1684 aa3.94□□□□□ -1.78
UBR1-211ENST00000569971 C17orf113A0A1B0GUU1 675 aa3.93□□□□□ -1.78
UBR1-211ENST00000569971 FAM237BA0A1B0GVD1 139 aa3.93□□□□□ -1.78
UBR1-211ENST00000569971 TARSL2A2RTX5 802 aaKnown RBP3.93□□□□□ -1.78
UBR1-211ENST00000569971 PABPN1LA6NDY0 278 aaKnown RBP3.93□□□□□ -1.78
UBR1-211ENST00000569971 B4DLN1 442 aa3.93□□□□□ -1.78
UBR1-211ENST00000569971 GCOM1H8Y6P7 765 aaPredicted RBP3.93□□□□□ -1.78
UBR1-211ENST00000569971 VILLO15195 856 aa3.93□□□□□ -1.78
UBR1-211ENST00000569971 STRNO43815 780 aa3.93□□□□□ -1.78
UBR1-211ENST00000569971 HBP1O60381 514 aa3.93□□□□□ -1.78
UBR1-211ENST00000569971 PLOD3O60568 738 aa3.93□□□□□ -1.78
UBR1-211ENST00000569971 TACC1O75410 805 aa3.93□□□□□ -1.78
UBR1-211ENST00000569971 FRAT2O75474 233 aaPredicted RBP3.93□□□□□ -1.78
UBR1-211ENST00000569971 CCNDBP1O95273 360 aa3.93□□□□□ -1.78
UBR1-211ENST00000569971 CBX6O95503 412 aa3.93□□□□□ -1.78
UBR1-211ENST00000569971 GALTP07902 379 aa3.93□□□□□ -1.78
UBR1-211ENST00000569971 HSP90AB1P08238 724 aaKnown RBP3.93□□□□□ -1.78
UBR1-211ENST00000569971 FCGR2AP12318 317 aa3.93□□□□□ -1.78
UBR1-211ENST00000569971 PTMSP20962 102 aa3.93□□□□□ -1.78
UBR1-211ENST00000569971 ELLP55199 621 aaPredicted RBP3.93□□□□□ -1.78
UBR1-211ENST00000569971 RPL7AP62424 266 aaKnown RBP3.93□□□□□ -1.78
UBR1-211ENST00000569971 SIM1P81133 766 aaPredicted RBP3.93□□□□□ -1.78
UBR1-211ENST00000569971 MC1RQ01726 317 aa3.93□□□□□ -1.78
UBR1-211ENST00000569971 WTAPQ15007 396 aa3.93□□□□□ -1.78
UBR1-211ENST00000569971 MTHFSDQ2M296 383 aaKnown RBP3.93□□□□□ -1.78
UBR1-211ENST00000569971 TTI2Q6NXR4 508 aa3.93□□□□□ -1.78
UBR1-211ENST00000569971 AADACL2Q6P093 401 aa3.93□□□□□ -1.78
UBR1-211ENST00000569971 PDXDC1Q6P996 788 aa3.93□□□□□ -1.78
UBR1-211ENST00000569971 ZNF474Q6S9Z5 364 aaPredicted RBP3.93□□□□□ -1.78
UBR1-211ENST00000569971 TMCO3Q6UWJ1 677 aa3.93□□□□□ -1.78
UBR1-211ENST00000569971 VSTM1Q6UX27 236 aa3.93□□□□□ -1.78
UBR1-211ENST00000569971 MOB3CQ70IA8 216 aa3.93□□□□□ -1.78
UBR1-211ENST00000569971 GHDCQ8N2G8 530 aa3.93□□□□□ -1.78
UBR1-211ENST00000569971 CPXM2Q8N436 756 aa3.93□□□□□ -1.78
UBR1-211ENST00000569971 WDTC1Q8N5D0 677 aa3.93□□□□□ -1.78
UBR1-211ENST00000569971 TMEM217Q8N7C4 229 aa3.93□□□□□ -1.78
UBR1-211ENST00000569971 SCAIQ8N9R8 606 aa3.93□□□□□ -1.78
UBR1-211ENST00000569971 KCNH5Q8NCM2 988 aa3.93□□□□□ -1.78
UBR1-211ENST00000569971 SNX21Q969T3 373 aa3.93□□□□□ -1.78
UBR1-211ENST00000569971 BBC3Q96PG8 261 aaPredicted RBP3.93□□□□□ -1.78
UBR1-211ENST00000569971 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.93□□□□□ -1.78
UBR1-211ENST00000569971 DCTPP1Q9H773 170 aa3.93□□□□□ -1.78
UBR1-211ENST00000569971 Q9N2J8 555 aa3.93□□□□□ -1.78
UBR1-211ENST00000569971 IL17RBQ9NRM6 502 aa3.93□□□□□ -1.78
UBR1-211ENST00000569971 ARL8BQ9NVJ2 186 aa3.93□□□□□ -1.78
UBR1-211ENST00000569971 SH3BP4Q9P0V3 963 aa3.93□□□□□ -1.78
UBR1-211ENST00000569971 LIMA1Q9UHB6 759 aaKnown RBP3.93□□□□□ -1.78
UBR1-211ENST00000569971 MAP3K5Q99683 1374 aa3.92□□□□□ -1.78
UBR1-211ENST00000569971 ZNF142P52746 1687 aaPredicted RBP3.92□□□□□ -1.78
UBR1-211ENST00000569971 GRID2IPA4D2P6 1211 aa3.92□□□□□ -1.78
UBR1-211ENST00000569971 SYNDIG1LA6NDD5 238 aa3.92□□□□□ -1.78
UBR1-211ENST00000569971 OR6C68A6NDL8 312 aa3.92□□□□□ -1.78
UBR1-211ENST00000569971 LIPT2A6NK58 231 aa3.92□□□□□ -1.78
UBR1-211ENST00000569971 AGAP14A8MT82 685 aa3.92□□□□□ -1.78
UBR1-211ENST00000569971 BTBD19C9JJ37 291 aa3.92□□□□□ -1.78
UBR1-211ENST00000569971 IFNL4K9M1U5 179 aa3.92□□□□□ -1.78
UBR1-211ENST00000569971 RRHO14718 337 aa3.92□□□□□ -1.78
UBR1-211ENST00000569971 MGST3O14880 152 aa3.92□□□□□ -1.78
UBR1-211ENST00000569971 P4HA2O15460 535 aa3.92□□□□□ -1.78
UBR1-211ENST00000569971 USP12O75317 370 aa3.92□□□□□ -1.78
UBR1-211ENST00000569971 SEC14L2O76054 403 aa3.92□□□□□ -1.78
UBR1-211ENST00000569971 SEC31AO94979 1220 aaKnown RBP3.92□□□□□ -1.78
UBR1-211ENST00000569971 STARD3NLO95772 234 aa3.92□□□□□ -1.78
UBR1-211ENST00000569971 CD38P28907 300 aa3.92□□□□□ -1.78
UBR1-211ENST00000569971 TM4SF1P30408 202 aa3.92□□□□□ -1.78
UBR1-211ENST00000569971 HOXC9P31274 260 aa3.92□□□□□ -1.78
UBR1-211ENST00000569971 BSGP35613 385 aa3.92□□□□□ -1.78
UBR1-211ENST00000569971 CPOXP36551 454 aa3.92□□□□□ -1.78
UBR1-211ENST00000569971 PBX3P40426 434 aa3.92□□□□□ -1.78
UBR1-211ENST00000569971 CLK3P49761 638 aaKnown RBP3.92□□□□□ -1.78
UBR1-211ENST00000569971 RARRES1P49788 294 aa3.92□□□□□ -1.78
UBR1-211ENST00000569971 NLRP5P59047 1200 aa3.92□□□□□ -1.78
UBR1-211ENST00000569971 CYP4A11Q02928 519 aa3.92□□□□□ -1.78
UBR1-211ENST00000569971 ACVR2BQ13705 512 aa3.92□□□□□ -1.78
UBR1-211ENST00000569971 DUSP28Q4G0W2 176 aa3.92□□□□□ -1.78
UBR1-211ENST00000569971 C10orf76Q5T2E6 689 aa3.92□□□□□ -1.78
UBR1-211ENST00000569971 CDC73Q6P1J9 531 aa3.92□□□□□ -1.78
UBR1-211ENST00000569971 CEP85Q6P2H3 762 aa3.92□□□□□ -1.78
UBR1-211ENST00000569971 OLFML1Q6UWY5 402 aa3.92□□□□□ -1.78
UBR1-211ENST00000569971 NEK8Q86SG6 692 aa3.92□□□□□ -1.78
UBR1-211ENST00000569971 TADA2BQ86TJ2 420 aa3.92□□□□□ -1.78
UBR1-211ENST00000569971 C16orf71Q8IYS4 520 aaPredicted RBP3.92□□□□□ -1.78
UBR1-211ENST00000569971 DNAAF1Q8NEP3 725 aa3.92□□□□□ -1.78
UBR1-211ENST00000569971 INTS12Q96CB8 462 aaKnown RBP3.92□□□□□ -1.78
UBR1-211ENST00000569971 REPS1Q96D71 796 aa3.92□□□□□ -1.78
UBR1-211ENST00000569971 CALML4Q96GE6 196 aa3.92□□□□□ -1.78
UBR1-211ENST00000569971 DUSP26Q9BV47 211 aa3.92□□□□□ -1.78
UBR1-211ENST00000569971 MXD3Q9BW11 206 aa3.92□□□□□ -1.78
UBR1-211ENST00000569971 C20orf141Q9NUB4 165 aa3.92□□□□□ -1.78
UBR1-211ENST00000569971 ZNF70Q9UC06 446 aaPredicted RBP3.92□□□□□ -1.78
UBR1-211ENST00000569971 SLCO3A1Q9UIG8 710 aa3.92□□□□□ -1.78
UBR1-211ENST00000569971 RPS6KA6Q9UK32 745 aa3.92□□□□□ -1.78
UBR1-211ENST00000569971 ADAM21Q9UKJ8 722 aa3.92□□□□□ -1.78
UBR1-211ENST00000569971 DHDHQ9UQ10 334 aa3.92□□□□□ -1.78
UBR1-211ENST00000569971 CAPN7Q9Y6W3 813 aa3.92□□□□□ -1.78
UBR1-211ENST00000569971 EMSYQ7Z589 1322 aa3.92□□□□□ -1.78
UBR1-211ENST00000569971 PXDNLA1KZ92 1463 aa3.92□□□□□ -1.78
UBR1-211ENST00000569971 LRRC37A3O60309 1634 aa3.92□□□□□ -1.78
UBR1-211ENST00000569971 RGPD8O14715 1765 aaPredicted RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms