RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 C11orf70Q9BRQ4 267 aa12.21□□□□□ -0.45
CAPN3-220ENST00000569827 NOL6Q9H6R4 1146 aaKnown RBP12.21□□□□□ -0.45
CAPN3-220ENST00000569827 TMEM248Q9NWD8 314 aa12.21□□□□□ -0.45
CAPN3-220ENST00000569827 NCKIPSDQ9NZQ3 722 aa12.21□□□□□ -0.45
CAPN3-220ENST00000569827 PPARGC1AQ9UBK2 798 aaKnown RBP12.21□□□□□ -0.45
CAPN3-220ENST00000569827 PISDQ9UG56 409 aa12.21□□□□□ -0.45
CAPN3-220ENST00000569827 OR1A2Q9Y585 309 aa12.21□□□□□ -0.45
CAPN3-220ENST00000569827 UBR5O95071 2799 aaPredicted RBP12.21□□□□□ -0.46
CAPN3-220ENST00000569827 CAPN8A6NHC0 703 aa12.2□□□□□ -0.46
CAPN3-220ENST00000569827 NTN3O00634 580 aaPredicted RBP12.2□□□□□ -0.46
CAPN3-220ENST00000569827 RAMP2O60895 175 aa12.2□□□□□ -0.46
CAPN3-220ENST00000569827 ITGA2BP08514 1039 aa12.2□□□□□ -0.46
CAPN3-220ENST00000569827 CTSEP14091 401 aa12.2□□□□□ -0.46
CAPN3-220ENST00000569827 RHOQP17081 205 aa12.2□□□□□ -0.46
CAPN3-220ENST00000569827 WT1P19544 449 aaPredicted RBP12.2□□□□□ -0.46
CAPN3-220ENST00000569827 ADRA1BP35368 520 aa12.2□□□□□ -0.46
CAPN3-220ENST00000569827 SCNN1AP37088 669 aa12.2□□□□□ -0.46
CAPN3-220ENST00000569827 ETV5P41161 510 aa12.2□□□□□ -0.46
CAPN3-220ENST00000569827 RPIAP49247 311 aa12.2□□□□□ -0.46
CAPN3-220ENST00000569827 KLK7P49862 253 aa12.2□□□□□ -0.46
CAPN3-220ENST00000569827 RHOAP61586 193 aa12.2□□□□□ -0.46
CAPN3-220ENST00000569827 CYP4F2P78329 520 aa12.2□□□□□ -0.46
CAPN3-220ENST00000569827 KCNC4Q03721 635 aa12.2□□□□□ -0.46
CAPN3-220ENST00000569827 WSCD2Q2TBF2 565 aa12.2□□□□□ -0.46
CAPN3-220ENST00000569827 ARL13BQ3SXY8 428 aa12.2□□□□□ -0.46
CAPN3-220ENST00000569827 LINC00303Q3SY05 128 aa12.2□□□□□ -0.46
CAPN3-220ENST00000569827 VWA3BQ502W6 1294 aa12.2□□□□□ -0.46
CAPN3-220ENST00000569827 KLHDC7AQ5VTJ3 777 aa12.2□□□□□ -0.46
CAPN3-220ENST00000569827 RAB11FIP2Q7L804 512 aa12.2□□□□□ -0.46
CAPN3-220ENST00000569827 ARL10Q8N8L6 244 aa12.2□□□□□ -0.46
CAPN3-220ENST00000569827 EPS8L1Q8TE68 723 aa12.2□□□□□ -0.46
CAPN3-220ENST00000569827 FUBP1Q96AE4 644 aaKnown RBP12.2□□□□□ -0.46
CAPN3-220ENST00000569827 TBC1D31Q96DN5 1066 aa12.2□□□□□ -0.46
CAPN3-220ENST00000569827 HMCESQ96FZ2 354 aa12.2□□□□□ -0.46
CAPN3-220ENST00000569827 GDAP1L1Q96MZ0 367 aa12.2□□□□□ -0.46
CAPN3-220ENST00000569827 GFM1Q96RP9 751 aaKnown RBP12.2□□□□□ -0.46
CAPN3-220ENST00000569827 NDST4Q9H3R1 872 aa12.2□□□□□ -0.46
CAPN3-220ENST00000569827 SUDS3Q9H7L9 328 aaPredicted RBP12.2□□□□□ -0.46
CAPN3-220ENST00000569827 MRPL40Q9NQ50 206 aaKnown RBP12.2□□□□□ -0.46
CAPN3-220ENST00000569827 KIAA1468Q9P260 1216 aa12.2□□□□□ -0.46
CAPN3-220ENST00000569827 GPR34Q9UPC5 381 aa12.2□□□□□ -0.46
CAPN3-220ENST00000569827 RELNP78509 3460 aa12.2□□□□□ -0.46
CAPN3-220ENST00000569827 PRAMEF33A0A0G2JMD5 474 aa12.19□□□□□ -0.46
CAPN3-220ENST00000569827 F8VZ95 297 aa12.19□□□□□ -0.46
CAPN3-220ENST00000569827 ARHGAP6O43182 974 aa12.19□□□□□ -0.46
CAPN3-220ENST00000569827 KDELR3O43731 214 aa12.19□□□□□ -0.46
CAPN3-220ENST00000569827 NOBOXO60393 691 aa12.19□□□□□ -0.46
CAPN3-220ENST00000569827 PRAMEF10O60809 474 aa12.19□□□□□ -0.46
CAPN3-220ENST00000569827 GFPT2O94808 682 aa12.19□□□□□ -0.46
CAPN3-220ENST00000569827 WISP1O95388 367 aa12.19□□□□□ -0.46
CAPN3-220ENST00000569827 POP4O95707 220 aaKnown RBP12.19□□□□□ -0.46
CAPN3-220ENST00000569827 IGSF6O95976 241 aa12.19□□□□□ -0.46
CAPN3-220ENST00000569827 PLEKP08567 350 aaPredicted RBP12.19□□□□□ -0.46
CAPN3-220ENST00000569827 FAM87AP0C7U9 286 aa12.19□□□□□ -0.46
CAPN3-220ENST00000569827 CHRNB2P17787 502 aa12.19□□□□□ -0.46
CAPN3-220ENST00000569827 SDC4P31431 198 aa12.19□□□□□ -0.46
CAPN3-220ENST00000569827 MAPKAPK2P49137 400 aa12.19□□□□□ -0.46
CAPN3-220ENST00000569827 HK3P52790 923 aa12.19□□□□□ -0.46
CAPN3-220ENST00000569827 HDAC4P56524 1084 aa12.19□□□□□ -0.46
CAPN3-220ENST00000569827 BPIFB4P59827 614 aa12.19□□□□□ -0.46
CAPN3-220ENST00000569827 TMPRSS9Q7Z410 1059 aa12.19□□□□□ -0.46
CAPN3-220ENST00000569827 ZFAND4Q86XD8 727 aa12.19□□□□□ -0.46
CAPN3-220ENST00000569827 ZSWIM9Q86XI8 627 aa12.19□□□□□ -0.46
CAPN3-220ENST00000569827 PLA2G15Q8NCC3 412 aa12.19□□□□□ -0.46
CAPN3-220ENST00000569827 FAM172AQ8WUF8 416 aa12.19□□□□□ -0.46
CAPN3-220ENST00000569827 JPH3Q8WXH2 748 aaPredicted RBP12.19□□□□□ -0.46
CAPN3-220ENST00000569827 ASB12Q8WXK4 309 aa12.19□□□□□ -0.46
CAPN3-220ENST00000569827 CCDC97Q96F63 343 aaPredicted RBP12.19□□□□□ -0.46
CAPN3-220ENST00000569827 LIN37Q96GY3 246 aaPredicted RBP12.19□□□□□ -0.46
CAPN3-220ENST00000569827 TUBGCP2Q9BSJ2 902 aa12.19□□□□□ -0.46
CAPN3-220ENST00000569827 NAA15Q9BXJ9 866 aaKnown RBP12.19□□□□□ -0.46
CAPN3-220ENST00000569827 OSBPL1AQ9BXW6 950 aa12.19□□□□□ -0.46
CAPN3-220ENST00000569827 EDEM3Q9BZQ6 932 aa12.19□□□□□ -0.46
CAPN3-220ENST00000569827 TTYH3Q9C0H2 523 aa12.19□□□□□ -0.46
CAPN3-220ENST00000569827 MAGEH1Q9H213 219 aa12.19□□□□□ -0.46
CAPN3-220ENST00000569827 FOXJ2Q9P0K8 574 aa12.19□□□□□ -0.46
CAPN3-220ENST00000569827 LHX3Q9UBR4 397 aa12.19□□□□□ -0.46
CAPN3-220ENST00000569827 HPCAL4Q9UM19 191 aa12.19□□□□□ -0.46
CAPN3-220ENST00000569827 C2CD4BA6NLJ0 364 aa12.18□□□□□ -0.46
CAPN3-220ENST00000569827 B4DGG1 531 aa12.18□□□□□ -0.46
CAPN3-220ENST00000569827 LSM8O95777 96 aaKnown RBP12.18□□□□□ -0.46
CAPN3-220ENST00000569827 JMJD7P0C870 316 aa12.18□□□□□ -0.46
CAPN3-220ENST00000569827 UCHL3P15374 230 aa12.18□□□□□ -0.46
CAPN3-220ENST00000569827 XPAP23025 273 aaPredicted RBP12.18□□□□□ -0.46
CAPN3-220ENST00000569827 ETFBP38117 255 aa12.18□□□□□ -0.46
CAPN3-220ENST00000569827 MAPK10P53779 464 aa12.18□□□□□ -0.46
CAPN3-220ENST00000569827 INHBCP55103 352 aa12.18□□□□□ -0.46
CAPN3-220ENST00000569827 SRP54P61011 504 aaKnown RBP12.18□□□□□ -0.46
CAPN3-220ENST00000569827 YPEL5P62699 121 aa12.18□□□□□ -0.46
CAPN3-220ENST00000569827 FMO1Q01740 532 aa12.18□□□□□ -0.46
CAPN3-220ENST00000569827 INPP5AQ14642 412 aa12.18□□□□□ -0.46
CAPN3-220ENST00000569827 NFATC4Q14934 902 aa12.18□□□□□ -0.46
CAPN3-220ENST00000569827 LRRC14Q15048 493 aa12.18□□□□□ -0.46
CAPN3-220ENST00000569827 ELOCQ15369 112 aa12.18□□□□□ -0.46
CAPN3-220ENST00000569827 DPCR1Q3MIW9 517 aa12.18□□□□□ -0.46
CAPN3-220ENST00000569827 USP53Q70EK8 1073 aa12.18□□□□□ -0.46
CAPN3-220ENST00000569827 PLPP6Q8IY26 295 aa12.18□□□□□ -0.46
CAPN3-220ENST00000569827 GRAMD1AQ96CP6 724 aa12.18□□□□□ -0.46
CAPN3-220ENST00000569827 ARHGEF26Q96DR7 871 aa12.18□□□□□ -0.46
CAPN3-220ENST00000569827 NCAPGQ9BPX3 1015 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms