RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 MFAP3P55082 362 aa6.73□□□□□ -1.33
SMG1-217ENST00000569764 IL2P60568 153 aa6.73□□□□□ -1.33
SMG1-217ENST00000569764 RPS26P62854 115 aaKnown RBP6.73□□□□□ -1.33
SMG1-217ENST00000569764 TUBA4AP68366 448 aa6.73□□□□□ -1.33
SMG1-217ENST00000569764 KCNJ12Q14500 433 aa6.73□□□□□ -1.33
SMG1-217ENST00000569764 SCYL2Q6P3W7 929 aa6.73□□□□□ -1.33
SMG1-217ENST00000569764 FOXR2Q6PJQ5 311 aa6.73□□□□□ -1.33
SMG1-217ENST00000569764 VSTM1Q6UX27 236 aa6.73□□□□□ -1.33
SMG1-217ENST00000569764 SULF2Q8IWU5 870 aa6.73□□□□□ -1.33
SMG1-217ENST00000569764 TMEM145Q8NBT3 493 aa6.73□□□□□ -1.33
SMG1-217ENST00000569764 GPR156Q8NFN8 814 aa6.73□□□□□ -1.33
SMG1-217ENST00000569764 CHP1Q99653 195 aa6.73□□□□□ -1.33
SMG1-217ENST00000569764 PANK4Q9NVE7 773 aa6.73□□□□□ -1.33
SMG1-217ENST00000569764 NSMCE4AQ9NXX6 385 aa6.73□□□□□ -1.33
SMG1-217ENST00000569764 DEC1Q9P2X7 70 aa6.73□□□□□ -1.33
SMG1-217ENST00000569764 NDOR1Q9UHB4 597 aa6.73□□□□□ -1.33
SMG1-217ENST00000569764 STAP1Q9ULZ2 295 aa6.73□□□□□ -1.33
SMG1-217ENST00000569764 MYH11P35749 1972 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 GOLGA8OA6NCC3 632 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 ZNF891A8MT65 544 aaPredicted RBP6.72□□□□□ -1.33
SMG1-217ENST00000569764 A8MXQ7 604 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 GOLGA8NF8WBI6 632 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 PDE2AO00408 941 aaPredicted RBP6.72□□□□□ -1.33
SMG1-217ENST00000569764 PODXLO00592 558 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 FPGTO14772 594 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 PFDN6O15212 129 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 DAB1O75553 588 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 DNAJC8O75937 253 aaPredicted RBP6.72□□□□□ -1.33
SMG1-217ENST00000569764 TRIM16O95361 564 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 FGF4P08620 206 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 ITGB5P18084 799 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 HOXA9P31269 272 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 OR1D2P34982 312 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 NUDT1P36639 197 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 OSTNP61366 133 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 FAM189BP81408 668 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 BLMHQ13867 455 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 CCINQ13939 588 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 MOGQ16653 247 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 SKIDA1Q1XH10 827 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 CEP85LQ5SZL2 805 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 ASTLQ6HA08 431 aaPredicted RBP6.72□□□□□ -1.33
SMG1-217ENST00000569764 DENND5BQ6ZUT9 1274 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 ERMP1Q7Z2K6 904 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 CPLX4Q7Z7G2 160 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 WFIKKN2Q8TEU8 576 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 CHTF18Q8WVB6 975 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 CCDC74BQ96LY2 380 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 LENG8Q96PV6 779 aaPredicted RBP6.72□□□□□ -1.33
SMG1-217ENST00000569764 SH2D3AQ9BRG2 576 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 MAGEH1Q9H213 219 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 TJP2Q9UDY2 1190 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 RNF24Q9Y225 148 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 CCDC195A0A1B0GUA6 201 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 TMEM150BA6NC51 233 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 GOLGA8KD6RF30 607 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 H3BUI4 141 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 DFNA5O60443 496 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 TSPAN3O60637 253 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 ZNF217O75362 1048 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 KRT37O76014 449 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 STAU1O95793 577 aaKnown RBP6.72□□□□□ -1.33
SMG1-217ENST00000569764 HMBSP08397 361 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 OXTRP30559 389 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 CAMLGP49069 296 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 COPB1P53618 953 aaKnown RBP6.72□□□□□ -1.33
SMG1-217ENST00000569764 DUSP6Q16828 381 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 PCGF3Q3KNV8 242 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 CCDC153Q494R4 210 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 ABHD15Q6UXT9 468 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 MRPL43Q8N983 215 aaKnown RBP6.72□□□□□ -1.33
SMG1-217ENST00000569764 ZNF671Q8TAW3 534 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 LENG1Q96BZ8 264 aaPredicted RBP6.72□□□□□ -1.33
SMG1-217ENST00000569764 NUDCD1Q96RS6 583 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 HAPLN3Q96S86 360 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 CCDC77Q9BR77 488 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 MLPHQ9BV36 600 aaPredicted RBP6.72□□□□□ -1.33
SMG1-217ENST00000569764 OSBPL6Q9BZF3 934 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 RNF38Q9H0F5 515 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 ISCUQ9H1K1 167 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 EPC1Q9H2F5 836 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 OSGEPL1Q9H4B0 414 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 CLK4Q9HAZ1 481 aaKnown RBP6.72□□□□□ -1.33
SMG1-217ENST00000569764 ERVK-5Q9HDB9 667 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 AGPAT5Q9NUQ2 364 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 FLRT1Q9NZU1 646 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 SOAT2O75908 522 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 PLGP00747 810 aaPredicted RBP6.72□□□□□ -1.33
SMG1-217ENST00000569764 SRFP11831 508 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 DRD1P21728 446 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 ACADSBP45954 432 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 CYP27A1Q02318 531 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 GAD2Q05329 585 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 CNGA2Q16280 664 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 NFIL3Q16649 462 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 INSCQ1MX18 579 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 PPP1R26Q5T8A7 1209 aaPredicted RBP6.72□□□□□ -1.33
SMG1-217ENST00000569764 CASC4Q6P4E1 433 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 WDR59Q6PJI9 974 aa6.72□□□□□ -1.33
SMG1-217ENST00000569764 CRELD2Q6UXH1 353 aaPredicted RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms