RNA–Protein interactions for RNA: ENST00000569337.1

UBR1-210, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5

Gene UBR1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-210ENST00000569337 C21orf59P57076 290 aa9.51□□□□□ -0.89
UBR1-210ENST00000569337 EIF3EP60228 445 aaKnown RBP9.51□□□□□ -0.89
UBR1-210ENST00000569337 PPIDQ08752 370 aaKnown RBP9.51□□□□□ -0.89
UBR1-210ENST00000569337 SNX1Q13596 522 aa9.51□□□□□ -0.89
UBR1-210ENST00000569337 PRKD1Q15139 912 aaPredicted RBP9.51□□□□□ -0.89
UBR1-210ENST00000569337 OASLQ15646 514 aaKnown RBP9.51□□□□□ -0.89
UBR1-210ENST00000569337 CYP1B1Q16678 543 aa9.51□□□□□ -0.89
UBR1-210ENST00000569337 HLA-BQ31612 363 aa9.51□□□□□ -0.89
UBR1-210ENST00000569337 N4BP2L1Q5TBK1 243 aaPredicted RBP9.51□□□□□ -0.89
UBR1-210ENST00000569337 CCDC181Q5TID7 509 aa9.51□□□□□ -0.89
UBR1-210ENST00000569337 AGBL4Q5VU57 503 aa9.51□□□□□ -0.89
UBR1-210ENST00000569337 TTC27Q6P3X3 843 aa9.51□□□□□ -0.89
UBR1-210ENST00000569337 PIP4P1Q86T03 277 aa9.51□□□□□ -0.89
UBR1-210ENST00000569337 PLPP6Q8IY26 295 aa9.51□□□□□ -0.89
UBR1-210ENST00000569337 RYBPQ8N488 228 aaPredicted RBP9.51□□□□□ -0.89
UBR1-210ENST00000569337 FAM131CQ96AQ9 280 aa9.51□□□□□ -0.89
UBR1-210ENST00000569337 SERAC1Q96JX3 654 aa9.51□□□□□ -0.89
UBR1-210ENST00000569337 ORAI3Q9BRQ5 295 aa9.51□□□□□ -0.89
UBR1-210ENST00000569337 TM6SF2Q9BZW4 377 aa9.51□□□□□ -0.89
UBR1-210ENST00000569337 EBF2Q9HAK2 575 aa9.51□□□□□ -0.89
UBR1-210ENST00000569337 PDFQ9HBH1 243 aa9.51□□□□□ -0.89
UBR1-210ENST00000569337 USP29Q9HBJ7 922 aa9.51□□□□□ -0.89
UBR1-210ENST00000569337 RRAGDQ9NQL2 400 aaPredicted RBP9.51□□□□□ -0.89
UBR1-210ENST00000569337 AASDHPPTQ9NRN7 309 aa9.51□□□□□ -0.89
UBR1-210ENST00000569337 HECAQ9UBI9 543 aaPredicted RBP9.51□□□□□ -0.89
UBR1-210ENST00000569337 IPO11Q9UI26 975 aaKnown RBP9.51□□□□□ -0.89
UBR1-210ENST00000569337 SNX11Q9Y5W9 270 aa9.51□□□□□ -0.89
UBR1-210ENST00000569337 RALGAPA1Q6GYQ0 2036 aa9.5□□□□□ -0.89
UBR1-210ENST00000569337 ARHGAP42A6NI28 874 aa9.5□□□□□ -0.89
UBR1-210ENST00000569337 KRIT1O00522 736 aa9.5□□□□□ -0.89
UBR1-210ENST00000569337 VILLO15195 856 aa9.5□□□□□ -0.89
UBR1-210ENST00000569337 LATO43561 262 aa9.5□□□□□ -0.89
UBR1-210ENST00000569337 LIASO43766 372 aa9.5□□□□□ -0.89
UBR1-210ENST00000569337 SH3BP5O60239 455 aa9.5□□□□□ -0.89
UBR1-210ENST00000569337 PRAMEF11O60813 436 aa9.5□□□□□ -0.89
UBR1-210ENST00000569337 GJB3O75712 270 aa9.5□□□□□ -0.89
UBR1-210ENST00000569337 POP4O95707 220 aaKnown RBP9.5□□□□□ -0.89
UBR1-210ENST00000569337 RBP3P10745 1247 aa9.5□□□□□ -0.89
UBR1-210ENST00000569337 CD59P13987 128 aa9.5□□□□□ -0.89
UBR1-210ENST00000569337 CD38P28907 300 aa9.5□□□□□ -0.89
UBR1-210ENST00000569337 MAT2AP31153 395 aaKnown RBP9.5□□□□□ -0.89
UBR1-210ENST00000569337 NUDT1P36639 197 aa9.5□□□□□ -0.89
UBR1-210ENST00000569337 KCNJ1P48048 391 aa9.5□□□□□ -0.89
UBR1-210ENST00000569337 CCNHP51946 323 aaPredicted RBP9.5□□□□□ -0.89
UBR1-210ENST00000569337 GDF10P55107 478 aa9.5□□□□□ -0.89
UBR1-210ENST00000569337 SNRPD1P62314 119 aaKnown RBP9.5□□□□□ -0.89
UBR1-210ENST00000569337 PPP2CBP62714 309 aa9.5□□□□□ -0.89
UBR1-210ENST00000569337 PPP2CAP67775 309 aa9.5□□□□□ -0.89
UBR1-210ENST00000569337 BNC1Q01954 994 aa9.5□□□□□ -0.89
UBR1-210ENST00000569337 XRCC4Q13426 336 aa9.5□□□□□ -0.89
UBR1-210ENST00000569337 SUZ12Q15022 739 aaKnown RBP9.5□□□□□ -0.89
UBR1-210ENST00000569337 PDK1Q15118 436 aa9.5□□□□□ -0.89
UBR1-210ENST00000569337 CCNG2Q16589 344 aa9.5□□□□□ -0.89
UBR1-210ENST00000569337 KIF19Q2TAC6 998 aa9.5□□□□□ -0.89
UBR1-210ENST00000569337 INO80DQ53TQ3 878 aaPredicted RBP9.5□□□□□ -0.89
UBR1-210ENST00000569337 SLC45A4Q5BKX6 768 aa9.5□□□□□ -0.89
UBR1-210ENST00000569337 NEK5Q6P3R8 708 aa9.5□□□□□ -0.89
UBR1-210ENST00000569337 FBXL19Q6PCT2 694 aa9.5□□□□□ -0.89
UBR1-210ENST00000569337 LAYNQ6UX15 382 aa9.5□□□□□ -0.89
UBR1-210ENST00000569337 ERN2Q76MJ5 926 aaKnown RBP9.5□□□□□ -0.89
UBR1-210ENST00000569337 ZNF572Q7Z3I7 529 aaPredicted RBP9.5□□□□□ -0.89
UBR1-210ENST00000569337 PRUNE1Q86TP1 453 aa9.5□□□□□ -0.89
UBR1-210ENST00000569337 ATPAF2Q8N5M1 289 aa9.5□□□□□ -0.89
UBR1-210ENST00000569337 LRRN4CLQ8ND94 238 aa9.5□□□□□ -0.89
UBR1-210ENST00000569337 OR2AP1Q8NGE2 309 aa9.5□□□□□ -0.89
UBR1-210ENST00000569337 CASKIN2Q8WXE0 1202 aa9.5□□□□□ -0.89
UBR1-210ENST00000569337 ARRDC3Q96B67 414 aa9.5□□□□□ -0.89
UBR1-210ENST00000569337 HDAC11Q96DB2 347 aa9.5□□□□□ -0.89
UBR1-210ENST00000569337 SLC6A18Q96N87 628 aa9.5□□□□□ -0.89
UBR1-210ENST00000569337 TSGA13Q96PP4 275 aa9.5□□□□□ -0.89
UBR1-210ENST00000569337 QKIQ96PU8 341 aaKnown RBP eCLIP9.5□□□□□ -0.89
UBR1-210ENST00000569337 DDX47Q9H0S4 455 aaKnown RBP9.5□□□□□ -0.89
UBR1-210ENST00000569337 ZDHHC6Q9H6R6 413 aa9.5□□□□□ -0.89
UBR1-210ENST00000569337 IL21RQ9HBE5 538 aa9.5□□□□□ -0.89
UBR1-210ENST00000569337 PREBQ9HCU5 417 aa9.5□□□□□ -0.89
UBR1-210ENST00000569337 TM7SF3Q9NS93 570 aa9.5□□□□□ -0.89
UBR1-210ENST00000569337 RNF14Q9UBS8 474 aa9.5□□□□□ -0.89
UBR1-210ENST00000569337 DMTF1Q9Y222 760 aa9.5□□□□□ -0.89
UBR1-210ENST00000569337 PCDHB9Q9Y5E1 797 aa9.5□□□□□ -0.89
UBR1-210ENST00000569337 WASF2Q9Y6W5 498 aa9.5□□□□□ -0.89
UBR1-210ENST00000569337 C10orf142B7Z368 130 aa9.49□□□□□ -0.89
UBR1-210ENST00000569337 H7C0C1 242 aa9.49□□□□□ -0.89
UBR1-210ENST00000569337 KCNK1O00180 336 aa9.49□□□□□ -0.89
UBR1-210ENST00000569337 RNF103O00237 685 aa9.49□□□□□ -0.89
UBR1-210ENST00000569337 MUSKO15146 869 aa9.49□□□□□ -0.89
UBR1-210ENST00000569337 DFNA5O60443 496 aa9.49□□□□□ -0.89
UBR1-210ENST00000569337 RNGTTO60942 597 aaKnown RBP9.49□□□□□ -0.89
UBR1-210ENST00000569337 PHF2O75151 1096 aa9.49□□□□□ -0.89
UBR1-210ENST00000569337 TMCC1O94876 653 aa9.49□□□□□ -0.89
UBR1-210ENST00000569337 PCDH8O95206 1070 aa9.49□□□□□ -0.89
UBR1-210ENST00000569337 GSRP00390 522 aa9.49□□□□□ -0.89
UBR1-210ENST00000569337 ZNF883P0CG24 379 aa9.49□□□□□ -0.89
UBR1-210ENST00000569337 ETS1P14921 441 aa9.49□□□□□ -0.89
UBR1-210ENST00000569337 MX2P20592 715 aa9.49□□□□□ -0.89
UBR1-210ENST00000569337 CCNCP24863 283 aa9.49□□□□□ -0.89
UBR1-210ENST00000569337 RBL1P28749 1068 aa9.49□□□□□ -0.89
UBR1-210ENST00000569337 COILP38432 576 aaPredicted RBP9.49□□□□□ -0.89
UBR1-210ENST00000569337 ATP5OP48047 213 aa9.49□□□□□ -0.89
UBR1-210ENST00000569337 NEK3P51956 506 aa9.49□□□□□ -0.89
UBR1-210ENST00000569337 TAS2R38P59533 333 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms