RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 USP17L3A6NCW0 530 aa7.15□□□□□ -1.26
CNOT1-216ENST00000569240 USP17L4A6NCW7 530 aa7.15□□□□□ -1.26
CNOT1-216ENST00000569240 MGAT4DA6NG13 374 aa7.15□□□□□ -1.26
CNOT1-216ENST00000569240 RPLP2P05387 115 aaKnown RBP7.15□□□□□ -1.26
CNOT1-216ENST00000569240 GNAZP19086 355 aa7.15□□□□□ -1.26
CNOT1-216ENST00000569240 SLC7A2P52569 658 aa7.15□□□□□ -1.26
CNOT1-216ENST00000569240 TCEAL1Q15170 157 aa7.15□□□□□ -1.26
CNOT1-216ENST00000569240 FAM189A2Q15884 450 aa7.15□□□□□ -1.26
CNOT1-216ENST00000569240 CTC1Q2NKJ3 1217 aa7.15□□□□□ -1.26
CNOT1-216ENST00000569240 KLHL35Q6PF15 583 aa7.15□□□□□ -1.26
CNOT1-216ENST00000569240 USP17L1Q7RTZ2 530 aa7.15□□□□□ -1.26
CNOT1-216ENST00000569240 FAM71AQ8IYT1 594 aa7.15□□□□□ -1.26
CNOT1-216ENST00000569240 ABI1Q8IZP0 508 aa7.15□□□□□ -1.26
CNOT1-216ENST00000569240 CBR4Q8N4T8 237 aa7.15□□□□□ -1.26
CNOT1-216ENST00000569240 SPPL2AQ8TCT8 520 aa7.15□□□□□ -1.26
CNOT1-216ENST00000569240 ATXN7L3BQ96GX2 97 aa7.15□□□□□ -1.26
CNOT1-216ENST00000569240 FEM1CQ96JP0 617 aa7.15□□□□□ -1.26
CNOT1-216ENST00000569240 RPRD1AQ96P16 312 aaPredicted RBP7.15□□□□□ -1.26
CNOT1-216ENST00000569240 SLITRK1Q96PX8 696 aa7.15□□□□□ -1.26
CNOT1-216ENST00000569240 CHMP1AQ9HD42 196 aaPredicted RBP7.15□□□□□ -1.26
CNOT1-216ENST00000569240 TMEM45AQ9NWC5 275 aa7.15□□□□□ -1.26
CNOT1-216ENST00000569240 TRAF6Q9Y4K3 522 aa7.15□□□□□ -1.26
CNOT1-216ENST00000569240 V9GYQ6 96 aa7.15□□□□□ -1.26
CNOT1-216ENST00000569240 EFCAB9A8MZ26 197 aa7.15□□□□□ -1.26
CNOT1-216ENST00000569240 KPNA5O15131 536 aa7.15□□□□□ -1.26
CNOT1-216ENST00000569240 AKAP3O75969 853 aa7.15□□□□□ -1.26
CNOT1-216ENST00000569240 USP17L8P0C7I0 530 aa7.15□□□□□ -1.26
CNOT1-216ENST00000569240 ANXA8P13928 327 aa7.15□□□□□ -1.26
CNOT1-216ENST00000569240 NDST1P52848 882 aa7.15□□□□□ -1.26
CNOT1-216ENST00000569240 UGT2B15P54855 530 aa7.15□□□□□ -1.26
CNOT1-216ENST00000569240 SRP54P61011 504 aaKnown RBP7.15□□□□□ -1.26
CNOT1-216ENST00000569240 HMBOX1Q6NT76 420 aa7.15□□□□□ -1.26
CNOT1-216ENST00000569240 FNDC5Q8NAU1 212 aa7.15□□□□□ -1.26
CNOT1-216ENST00000569240 MIPEPQ99797 713 aa7.15□□□□□ -1.26
CNOT1-216ENST00000569240 C14orf105Q9NVL8 296 aa7.15□□□□□ -1.26
CNOT1-216ENST00000569240 RDH8Q9NYR8 311 aa7.15□□□□□ -1.26
CNOT1-216ENST00000569240 IL20Q9NYY1 176 aa7.15□□□□□ -1.26
CNOT1-216ENST00000569240 XPR1Q9UBH6 696 aa7.15□□□□□ -1.26
CNOT1-216ENST00000569240 FARP1Q9Y4F1 1045 aaPredicted RBP7.15□□□□□ -1.26
CNOT1-216ENST00000569240 LMTK3Q96Q04 1460 aa7.15□□□□□ -1.27
CNOT1-216ENST00000569240 SH3D21A4FU49 640 aa7.15□□□□□ -1.27
CNOT1-216ENST00000569240 RXRBP28702 533 aa7.15□□□□□ -1.27
CNOT1-216ENST00000569240 TAGLNQ01995 201 aaKnown RBP7.15□□□□□ -1.27
CNOT1-216ENST00000569240 KCTD1Q719H9 257 aa7.15□□□□□ -1.27
CNOT1-216ENST00000569240 UBE2J2Q8N2K1 259 aa7.15□□□□□ -1.27
CNOT1-216ENST00000569240 LILRB4Q8NHJ6 448 aa7.15□□□□□ -1.27
CNOT1-216ENST00000569240 ITCHQ96J02 903 aa7.15□□□□□ -1.27
CNOT1-216ENST00000569240 FBXO6Q9NRD1 293 aaPredicted RBP7.15□□□□□ -1.27
CNOT1-216ENST00000569240 FAM217BQ9NTX9 383 aaPredicted RBP7.15□□□□□ -1.27
CNOT1-216ENST00000569240 LMCD1Q9NZU5 365 aa7.15□□□□□ -1.27
CNOT1-216ENST00000569240 TFR2Q9UP52 801 aa7.15□□□□□ -1.27
CNOT1-216ENST00000569240 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.15□□□□□ -1.27
CNOT1-216ENST00000569240 MEMO1Q9Y316 297 aa7.15□□□□□ -1.27
CNOT1-216ENST00000569240 RNF17Q9BXT8 1623 aaKnown RBP7.15□□□□□ -1.27
CNOT1-216ENST00000569240 CSF1RP07333 972 aa7.15□□□□□ -1.27
CNOT1-216ENST00000569240 CHRNGP07510 517 aa7.15□□□□□ -1.27
CNOT1-216ENST00000569240 STOMP27105 288 aa7.15□□□□□ -1.27
CNOT1-216ENST00000569240 CTSKP43235 329 aa7.15□□□□□ -1.27
CNOT1-216ENST00000569240 ETV1P50549 477 aa7.15□□□□□ -1.27
CNOT1-216ENST00000569240 ATP4BP51164 291 aa7.15□□□□□ -1.27
CNOT1-216ENST00000569240 PPP5CP53041 499 aa7.15□□□□□ -1.27
CNOT1-216ENST00000569240 BMPR2Q13873 1038 aa7.15□□□□□ -1.27
CNOT1-216ENST00000569240 MAPKAPK3Q16644 382 aa7.15□□□□□ -1.27
CNOT1-216ENST00000569240 WDR72Q3MJ13 1102 aa7.15□□□□□ -1.27
CNOT1-216ENST00000569240 KLHL22Q53GT1 634 aa7.15□□□□□ -1.27
CNOT1-216ENST00000569240 ZSCAN18Q8TBC5 510 aaPredicted RBP7.15□□□□□ -1.27
CNOT1-216ENST00000569240 LPGAT1Q92604 370 aa7.15□□□□□ -1.27
CNOT1-216ENST00000569240 AKAP1Q92667 903 aaKnown RBP eCLIP7.15□□□□□ -1.27
CNOT1-216ENST00000569240 ISOC1Q96CN7 298 aa7.15□□□□□ -1.27
CNOT1-216ENST00000569240 GMCL1Q96IK5 515 aa7.15□□□□□ -1.27
CNOT1-216ENST00000569240 CORO1BQ9BR76 489 aa7.15□□□□□ -1.27
CNOT1-216ENST00000569240 MKRN2Q9H000 416 aaKnown RBP7.15□□□□□ -1.27
CNOT1-216ENST00000569240 A0A0B4J269 797 aa7.14□□□□□ -1.27
CNOT1-216ENST00000569240 GMFGO60234 142 aa7.14□□□□□ -1.27
CNOT1-216ENST00000569240 RFPL2O75678 378 aa7.14□□□□□ -1.27
CNOT1-216ENST00000569240 SLITRK5O94991 958 aa7.14□□□□□ -1.27
CNOT1-216ENST00000569240 HMGCRP04035 888 aa7.14□□□□□ -1.27
CNOT1-216ENST00000569240 TRAPPC2P0DI81 140 aa7.14□□□□□ -1.27
CNOT1-216ENST00000569240 TRAPPC2BP0DI82 140 aa7.14□□□□□ -1.27
CNOT1-216ENST00000569240 PRKACAP17612 351 aa7.14□□□□□ -1.27
CNOT1-216ENST00000569240 IGFBP5P24593 272 aa7.14□□□□□ -1.27
CNOT1-216ENST00000569240 PIK3CBP42338 1070 aa7.14□□□□□ -1.27
CNOT1-216ENST00000569240 MAPK9P45984 424 aa7.14□□□□□ -1.27
CNOT1-216ENST00000569240 ABRQ12979 859 aa7.14□□□□□ -1.27
CNOT1-216ENST00000569240 SV2CQ496J9 727 aa7.14□□□□□ -1.27
CNOT1-216ENST00000569240 TPRG1LQ5T0D9 272 aa7.14□□□□□ -1.27
CNOT1-216ENST00000569240 ZBTB33Q86T24 672 aa7.14□□□□□ -1.27
CNOT1-216ENST00000569240 PSTKQ8IV42 348 aaKnown RBP7.14□□□□□ -1.27
CNOT1-216ENST00000569240 SPARTQ8N0X7 666 aa7.14□□□□□ -1.27
CNOT1-216ENST00000569240 OR8H3Q8N146 312 aa7.14□□□□□ -1.27
CNOT1-216ENST00000569240 CPSF7Q8N684 471 aaKnown RBP7.14□□□□□ -1.27
CNOT1-216ENST00000569240 COLGALT1Q8NBJ5 622 aa7.14□□□□□ -1.27
CNOT1-216ENST00000569240 SLC39A8Q9C0K1 460 aa7.14□□□□□ -1.27
CNOT1-216ENST00000569240 KCTD10Q9H3F6 313 aa7.14□□□□□ -1.27
CNOT1-216ENST00000569240 NXF3Q9H4D5 531 aaKnown RBP7.14□□□□□ -1.27
CNOT1-216ENST00000569240 MID1IP1Q9NPA3 183 aa7.14□□□□□ -1.27
CNOT1-216ENST00000569240 TESMINQ9Y4I5 508 aa7.14□□□□□ -1.27
CNOT1-216ENST00000569240 ASB4Q9Y574 426 aa7.14□□□□□ -1.27
CNOT1-216ENST00000569240 ADGRB2O60241 1585 aa7.14□□□□□ -1.27
CNOT1-216ENST00000569240 MST1RQ04912 1400 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms