RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 SYNCQ9H7C4 482 aa12.62□□□□□ -0.39
SNX29-207ENST00000568949 PPARGC1AQ9UBK2 798 aaKnown RBP12.62□□□□□ -0.39
SNX29-207ENST00000568949 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.62□□□□□ -0.39
SNX29-207ENST00000568949 ACTL7AQ9Y615 435 aa12.62□□□□□ -0.39
SNX29-207ENST00000568949 TEX15Q9BXT5 2789 aa12.62□□□□□ -0.39
SNX29-207ENST00000568949 SDK2Q58EX2 2172 aa12.62□□□□□ -0.39
SNX29-207ENST00000568949 SCNN1AP37088 669 aa12.61□□□□□ -0.39
SNX29-207ENST00000568949 USP8P40818 1118 aa12.61□□□□□ -0.39
SNX29-207ENST00000568949 CASRP41180 1078 aa12.61□□□□□ -0.39
SNX29-207ENST00000568949 SUOXP51687 545 aa12.61□□□□□ -0.39
SNX29-207ENST00000568949 MAPK10P53779 464 aa12.61□□□□□ -0.39
SNX29-207ENST00000568949 SRP54P61011 504 aaKnown RBP12.61□□□□□ -0.39
SNX29-207ENST00000568949 KCNAB2Q13303 367 aa12.61□□□□□ -0.39
SNX29-207ENST00000568949 NFATC4Q14934 902 aa12.61□□□□□ -0.39
SNX29-207ENST00000568949 PTPN20Q4JDL3 420 aa12.61□□□□□ -0.39
SNX29-207ENST00000568949 CERCAMQ5T4B2 595 aa12.61□□□□□ -0.39
SNX29-207ENST00000568949 ENPP7Q6UWV6 458 aa12.61□□□□□ -0.39
SNX29-207ENST00000568949 GDPD4Q6W3E5 623 aa12.61□□□□□ -0.39
SNX29-207ENST00000568949 SPRED1Q7Z699 444 aa12.61□□□□□ -0.39
SNX29-207ENST00000568949 PTRH1Q86Y79 214 aaKnown RBP12.61□□□□□ -0.39
SNX29-207ENST00000568949 DRC7Q8IY82 874 aa12.61□□□□□ -0.39
SNX29-207ENST00000568949 Q8N9G6 341 aaPredicted RBP12.61□□□□□ -0.39
SNX29-207ENST00000568949 SHC3Q92529 594 aa12.61□□□□□ -0.39
SNX29-207ENST00000568949 RBM15Q96T37 977 aaKnown RBP eCLIP12.61□□□□□ -0.39
SNX29-207ENST00000568949 RETREG1Q9H6L5 497 aa12.61□□□□□ -0.39
SNX29-207ENST00000568949 TMPRSS4Q9NRS4 437 aa12.61□□□□□ -0.39
SNX29-207ENST00000568949 AKAP7Q9P0M2 348 aaPredicted RBP12.61□□□□□ -0.39
SNX29-207ENST00000568949 DKK3Q9UBP4 350 aa12.61□□□□□ -0.39
SNX29-207ENST00000568949 ANAPC2Q9UJX6 822 aa12.61□□□□□ -0.39
SNX29-207ENST00000568949 ZDHHC9Q9Y397 364 aa12.61□□□□□ -0.39
SNX29-207ENST00000568949 RNF215Q9Y6U7 377 aa12.61□□□□□ -0.39
SNX29-207ENST00000568949 ARHGEF17Q96PE2 2063 aaPredicted RBP12.61□□□□□ -0.39
SNX29-207ENST00000568949 USP9XQ93008 2570 aaPredicted RBP12.61□□□□□ -0.39
SNX29-207ENST00000568949 ZFC3H1O60293 1989 aaKnown RBP12.6□□□□□ -0.39
SNX29-207ENST00000568949 BICDL2A1A5D9 508 aa12.6□□□□□ -0.39
SNX29-207ENST00000568949 STMND1H3BQB6 276 aa12.6□□□□□ -0.39
SNX29-207ENST00000568949 TNFP01375 233 aa12.6□□□□□ -0.39
SNX29-207ENST00000568949 CD44P16070 742 aaKnown RBP12.6□□□□□ -0.39
SNX29-207ENST00000568949 KRT9P35527 623 aa12.6□□□□□ -0.39
SNX29-207ENST00000568949 ACVRL1P37023 503 aa12.6□□□□□ -0.39
SNX29-207ENST00000568949 ATP1A2P50993 1020 aa12.6□□□□□ -0.39
SNX29-207ENST00000568949 POLE2P56282 527 aa12.6□□□□□ -0.39
SNX29-207ENST00000568949 RNASE9P60153 205 aaKnown RBP12.6□□□□□ -0.39
SNX29-207ENST00000568949 PTK2Q05397 1052 aa12.6□□□□□ -0.39
SNX29-207ENST00000568949 RAD51Q06609 339 aa12.6□□□□□ -0.39
SNX29-207ENST00000568949 LRRC14Q15048 493 aa12.6□□□□□ -0.39
SNX29-207ENST00000568949 SKIDA1Q1XH10 827 aa12.6□□□□□ -0.39
SNX29-207ENST00000568949 WSCD2Q2TBF2 565 aa12.6□□□□□ -0.39
SNX29-207ENST00000568949 TMEM52BQ4KMG9 183 aa12.6□□□□□ -0.39
SNX29-207ENST00000568949 PHF19Q5T6S3 580 aa12.6□□□□□ -0.39
SNX29-207ENST00000568949 TRIM65Q6PJ69 517 aa12.6□□□□□ -0.39
SNX29-207ENST00000568949 RD3Q7Z3Z2 195 aa12.6□□□□□ -0.39
SNX29-207ENST00000568949 GPBAR1Q8TDU6 330 aa12.6□□□□□ -0.39
SNX29-207ENST00000568949 TBCBQ99426 244 aa12.6□□□□□ -0.39
SNX29-207ENST00000568949 APOOQ9BUR5 198 aa12.6□□□□□ -0.39
SNX29-207ENST00000568949 KLQ9UEF7 1012 aa12.6□□□□□ -0.39
SNX29-207ENST00000568949 HOOK1Q9UJC3 728 aaKnown RBP12.6□□□□□ -0.39
SNX29-207ENST00000568949 HPCAL4Q9UM19 191 aa12.6□□□□□ -0.39
SNX29-207ENST00000568949 MAN2B2Q9Y2E5 1009 aa12.6□□□□□ -0.39
SNX29-207ENST00000568949 ATP6V1DQ9Y5K8 247 aa12.6□□□□□ -0.39
SNX29-207ENST00000568949 DGKBQ9Y6T7 804 aa12.6□□□□□ -0.39
SNX29-207ENST00000568949 NUDT21O43809 227 aaKnown RBP12.59□□□□□ -0.39
SNX29-207ENST00000568949 TIMP2P16035 220 aa12.59□□□□□ -0.39
SNX29-207ENST00000568949 CCR10P46092 362 aa12.59□□□□□ -0.39
SNX29-207ENST00000568949 MAPKAPK2P49137 400 aa12.59□□□□□ -0.39
SNX29-207ENST00000568949 NRG1Q02297 640 aaPredicted RBP12.59□□□□□ -0.39
SNX29-207ENST00000568949 ELP6Q0PNE2 266 aa12.59□□□□□ -0.39
SNX29-207ENST00000568949 ARHGEF7Q14155 803 aa12.59□□□□□ -0.39
SNX29-207ENST00000568949 HLTFQ14527 1009 aaKnown RBP eCLIP12.59□□□□□ -0.39
SNX29-207ENST00000568949 C16orf72Q14CZ0 275 aa12.59□□□□□ -0.39
SNX29-207ENST00000568949 AGERQ15109 404 aa12.59□□□□□ -0.39
SNX29-207ENST00000568949 TCEA2Q15560 299 aa12.59□□□□□ -0.39
SNX29-207ENST00000568949 CLPPQ16740 277 aaPredicted RBP12.59□□□□□ -0.39
SNX29-207ENST00000568949 ARHGAP44Q17R89 818 aa12.59□□□□□ -0.39
SNX29-207ENST00000568949 C14orf28Q4W4Y0 310 aa12.59□□□□□ -0.39
SNX29-207ENST00000568949 LRRC73Q5JTD7 316 aa12.59□□□□□ -0.39
SNX29-207ENST00000568949 KLHL10Q6JEL2 608 aa12.59□□□□□ -0.39
SNX29-207ENST00000568949 GJB7Q6PEY0 223 aa12.59□□□□□ -0.39
SNX29-207ENST00000568949 BNIPLQ7Z465 357 aa12.59□□□□□ -0.39
SNX29-207ENST00000568949 FAM26EQ8N5C1 309 aa12.59□□□□□ -0.39
SNX29-207ENST00000568949 NKD1Q969G9 470 aa12.59□□□□□ -0.39
SNX29-207ENST00000568949 WDR92Q96MX6 357 aa12.59□□□□□ -0.39
SNX29-207ENST00000568949 GDAP1L1Q96MZ0 367 aa12.59□□□□□ -0.39
SNX29-207ENST00000568949 CATSPER2Q96P56 530 aa12.59□□□□□ -0.39
SNX29-207ENST00000568949 PSMG3-AS1Q96PY0 264 aa12.59□□□□□ -0.39
SNX29-207ENST00000568949 WRAP53Q9BUR4 548 aaKnown RBP12.59□□□□□ -0.39
SNX29-207ENST00000568949 CDH19Q9H159 772 aa12.59□□□□□ -0.39
SNX29-207ENST00000568949 MAGEH1Q9H213 219 aa12.59□□□□□ -0.39
SNX29-207ENST00000568949 SEMA6CQ9H3T2 930 aa12.59□□□□□ -0.39
SNX29-207ENST00000568949 LRIT1Q9P2V4 623 aa12.59□□□□□ -0.39
SNX29-207ENST00000568949 MFHAS1Q9Y4C4 1052 aa12.59□□□□□ -0.39
SNX29-207ENST00000568949 PCDHGA3Q9Y5H0 932 aa12.59□□□□□ -0.39
SNX29-207ENST00000568949 MYO9AB2RTY4 2548 aa12.59□□□□□ -0.39
SNX29-207ENST00000568949 ZSCAN5CA6NGD5 496 aaPredicted RBP12.58□□□□□ -0.4
SNX29-207ENST00000568949 AGRPO00253 132 aa12.58□□□□□ -0.4
SNX29-207ENST00000568949 HGSO14964 777 aaPredicted RBP12.58□□□□□ -0.4
SNX29-207ENST00000568949 CPNE6O95741 557 aa12.58□□□□□ -0.4
SNX29-207ENST00000568949 ITIH2P19823 946 aa12.58□□□□□ -0.4
SNX29-207ENST00000568949 GABRB2P47870 512 aa12.58□□□□□ -0.4
SNX29-207ENST00000568949 B4GALNT1Q00973 533 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms