RNA–Protein interactions for RNA: ENST00000568591.5

PKD1-235, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-235ENST00000568591 CACNG3O60359 315 aa18.47■□□□□ 0.55
PKD1-235ENST00000568591 MAFKO60675 156 aa18.47■□□□□ 0.55
PKD1-235ENST00000568591 HSPA1AP0DMV8 641 aaKnown RBP18.47■□□□□ 0.55
PKD1-235ENST00000568591 HSPA1BP0DMV9 641 aaKnown RBP18.47■□□□□ 0.55
PKD1-235ENST00000568591 CD151P48509 253 aa18.47■□□□□ 0.55
PKD1-235ENST00000568591 USP46P62068 366 aa18.47■□□□□ 0.55
PKD1-235ENST00000568591 OLFML2BQ68BL8 750 aa18.47■□□□□ 0.55
PKD1-235ENST00000568591 HMBOX1Q6NT76 420 aa18.47■□□□□ 0.55
PKD1-235ENST00000568591 CUZD1Q86UP6 607 aa18.47■□□□□ 0.55
PKD1-235ENST00000568591 NOL11Q9H8H0 719 aaKnown RBP18.47■□□□□ 0.55
PKD1-235ENST00000568591 NSMCE4AQ9NXX6 385 aa18.47■□□□□ 0.55
PKD1-235ENST00000568591 PSMD12O00232 456 aaPredicted RBP18.46■□□□□ 0.55
PKD1-235ENST00000568591 PDHXO00330 501 aa18.46■□□□□ 0.55
PKD1-235ENST00000568591 NPHS1O60500 1241 aa18.46■□□□□ 0.55
PKD1-235ENST00000568591 F2P00734 622 aa18.46■□□□□ 0.55
PKD1-235ENST00000568591 COL6A2P12110 1019 aa18.46■□□□□ 0.55
PKD1-235ENST00000568591 BDNFP23560 247 aa18.46■□□□□ 0.55
PKD1-235ENST00000568591 LRPAP1P30533 357 aa18.46■□□□□ 0.55
PKD1-235ENST00000568591 ADSLP30566 484 aaPredicted RBP18.46■□□□□ 0.55
PKD1-235ENST00000568591 RANBP1P43487 201 aa18.46■□□□□ 0.55
PKD1-235ENST00000568591 PRKAA2P54646 552 aa18.46■□□□□ 0.55
PKD1-235ENST00000568591 IKBKEQ14164 716 aa18.46■□□□□ 0.55
PKD1-235ENST00000568591 TECRLQ5HYJ1 363 aa18.46■□□□□ 0.55
PKD1-235ENST00000568591 PIWIL4Q7Z3Z4 852 aaKnown RBP18.46■□□□□ 0.55
PKD1-235ENST00000568591 HERC6Q8IVU3 1022 aa18.46■□□□□ 0.55
PKD1-235ENST00000568591 C2CD4AQ8NCU7 369 aaPredicted RBP18.46■□□□□ 0.55
PKD1-235ENST00000568591 CATSPER1Q8NEC5 780 aa18.46■□□□□ 0.55
PKD1-235ENST00000568591 PPHLN1Q8NEY8 458 aaKnown RBP18.46■□□□□ 0.55
PKD1-235ENST00000568591 MRGPRX2Q96LB1 330 aa18.46■□□□□ 0.55
PKD1-235ENST00000568591 TREX1Q9NSU2 369 aa18.46■□□□□ 0.55
PKD1-235ENST00000568591 MPP6Q9NZW5 540 aa18.46■□□□□ 0.55
PKD1-235ENST00000568591 NDUFA13Q9P0J0 144 aa18.46■□□□□ 0.55
PKD1-235ENST00000568591 SFMBT1Q9UHJ3 866 aa18.46■□□□□ 0.55
PKD1-235ENST00000568591 PLXNB2O15031 1838 aa18.46■□□□□ 0.55
PKD1-235ENST00000568591 PPP6CO00743 305 aa18.46■□□□□ 0.55
PKD1-235ENST00000568591 TRIM24O15164 1050 aa18.46■□□□□ 0.55
PKD1-235ENST00000568591 UBDO15205 165 aa18.46■□□□□ 0.55
PKD1-235ENST00000568591 CCDC166P0CW27 439 aa18.46■□□□□ 0.55
PKD1-235ENST00000568591 PSMC3P17980 439 aa18.46■□□□□ 0.55
PKD1-235ENST00000568591 ATP5F1P24539 256 aaPredicted RBP18.46■□□□□ 0.55
PKD1-235ENST00000568591 ADRA1AP35348 466 aa18.46■□□□□ 0.55
PKD1-235ENST00000568591 HK2P52789 917 aa18.46■□□□□ 0.55
PKD1-235ENST00000568591 UGP2Q16851 508 aa18.46■□□□□ 0.55
PKD1-235ENST00000568591 C6orf10Q5SRN2 563 aa18.46■□□□□ 0.55
PKD1-235ENST00000568591 DCLRE1AQ6PJP8 1040 aa18.46■□□□□ 0.55
PKD1-235ENST00000568591 CHSY3Q70JA7 882 aa18.46■□□□□ 0.55
PKD1-235ENST00000568591 GPR142Q7Z601 462 aa18.46■□□□□ 0.55
PKD1-235ENST00000568591 TMEM126BQ8IUX1 230 aa18.46■□□□□ 0.55
PKD1-235ENST00000568591 TINF2Q9BSI4 451 aa18.46■□□□□ 0.55
PKD1-235ENST00000568591 FSD1LQ9BXM9 530 aa18.46■□□□□ 0.55
PKD1-235ENST00000568591 TRIM8Q9BZR9 551 aa18.46■□□□□ 0.55
PKD1-235ENST00000568591 PREBQ9HCU5 417 aa18.46■□□□□ 0.55
PKD1-235ENST00000568591 ATXN10Q9UBB4 475 aa18.46■□□□□ 0.55
PKD1-235ENST00000568591 AAR2Q9Y312 384 aaKnown RBP18.46■□□□□ 0.55
PKD1-235ENST00000568591 TRPC5OSA6NMA1 111 aa18.45■□□□□ 0.54
PKD1-235ENST00000568591 TIPRLO75663 272 aa18.45■□□□□ 0.54
PKD1-235ENST00000568591 CDH15P55291 814 aa18.45■□□□□ 0.54
PKD1-235ENST00000568591 BEX3Q00994 111 aa18.45■□□□□ 0.54
PKD1-235ENST00000568591 LRRC23Q53EV4 343 aaPredicted RBP18.45■□□□□ 0.54
PKD1-235ENST00000568591 HASPINQ8TF76 798 aa18.45■□□□□ 0.54
PKD1-235ENST00000568591 MYLPFQ96A32 169 aa18.45■□□□□ 0.54
PKD1-235ENST00000568591 ZFRQ96KR1 1074 aaKnown RBP18.45■□□□□ 0.54
PKD1-235ENST00000568591 C3orf30Q96M34 536 aa18.45■□□□□ 0.54
PKD1-235ENST00000568591 FCRL5Q96RD9 977 aa18.45■□□□□ 0.54
PKD1-235ENST00000568591 TMEM209Q96SK2 561 aa18.45■□□□□ 0.54
PKD1-235ENST00000568591 IL1RL2Q9HB29 575 aa18.45■□□□□ 0.54
PKD1-235ENST00000568591 TMLHEQ9NVH6 421 aa18.45■□□□□ 0.54
PKD1-235ENST00000568591 RBM22Q9NW64 420 aaKnown RBP eCLIP18.45■□□□□ 0.542e-6■□□□□ 10.6
PKD1-235ENST00000568591 TTC3P53804 2025 aa18.45■□□□□ 0.54
PKD1-235ENST00000568591 ZNF839A8K0R7 811 aa18.45■□□□□ 0.54
PKD1-235ENST00000568591 UGT1A6P19224 532 aa18.45■□□□□ 0.54
PKD1-235ENST00000568591 SLC12A2P55011 1212 aa18.45■□□□□ 0.54
PKD1-235ENST00000568591 MAXP61244 160 aa18.45■□□□□ 0.54
PKD1-235ENST00000568591 MFSD10Q14728 455 aa18.45■□□□□ 0.54
PKD1-235ENST00000568591 NEPROQ6NW34 567 aa18.45■□□□□ 0.54
PKD1-235ENST00000568591 TMEM207Q6UWW9 146 aa18.45■□□□□ 0.54
PKD1-235ENST00000568591 PIM3Q86V86 326 aa18.45■□□□□ 0.54
PKD1-235ENST00000568591 DRAXINQ8NBI3 349 aaPredicted RBP18.45■□□□□ 0.54
PKD1-235ENST00000568591 RTP3Q9BQQ7 232 aa18.45■□□□□ 0.54
PKD1-235ENST00000568591 UNC93B1Q9H1C4 597 aa18.45■□□□□ 0.54
PKD1-235ENST00000568591 ARHGEF38Q9NXL2 777 aa18.45■□□□□ 0.54
PKD1-235ENST00000568591 BCAP29Q9UHQ4 241 aa18.45■□□□□ 0.54
PKD1-235ENST00000568591 CEPT1Q9Y6K0 416 aa18.45■□□□□ 0.54
PKD1-235ENST00000568591 OR51F1A6NGY5 319 aa18.44■□□□□ 0.54
PKD1-235ENST00000568591 MOCS2O96007 188 aaPredicted RBP18.44■□□□□ 0.54
PKD1-235ENST00000568591 C8BP07358 591 aa18.44■□□□□ 0.54
PKD1-235ENST00000568591 CDH13P55290 713 aa18.44■□□□□ 0.54
PKD1-235ENST00000568591 ADAM17P78536 824 aa18.44■□□□□ 0.54
PKD1-235ENST00000568591 RHDQ02161 417 aa18.44■□□□□ 0.54
PKD1-235ENST00000568591 IHHQ14623 411 aa18.44■□□□□ 0.54
PKD1-235ENST00000568591 USP41Q3LFD5 358 aa18.44■□□□□ 0.54
PKD1-235ENST00000568591 ARTNQ5T4W7 220 aa18.44■□□□□ 0.54
PKD1-235ENST00000568591 NUP93Q8N1F7 819 aa18.44■□□□□ 0.54
PKD1-235ENST00000568591 ITFG2Q969R8 447 aa18.44■□□□□ 0.54
PKD1-235ENST00000568591 TSGA13Q96PP4 275 aa18.44■□□□□ 0.54
PKD1-235ENST00000568591 CAAP1Q9H8G2 361 aa18.44■□□□□ 0.54
PKD1-235ENST00000568591 SUCOQ9UBS9 1254 aaKnown RBP18.44■□□□□ 0.54
PKD1-235ENST00000568591 ARHGEF37A1IGU5 675 aa18.44■□□□□ 0.54
PKD1-235ENST00000568591 PAGE1O75459 146 aa18.44■□□□□ 0.54
PKD1-235ENST00000568591 IPO13O94829 963 aaKnown RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms