RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 EEF1GP26641 437 aaKnown RBP15.69■□□□□ 0.1
NME3-211ENST00000568561 EPHB2P29323 1055 aa15.69■□□□□ 0.1
NME3-211ENST00000568561 SOX5P35711 763 aa15.69■□□□□ 0.1
NME3-211ENST00000568561 JAM2P57087 298 aa15.69■□□□□ 0.1
NME3-211ENST00000568561 YPEL5P62699 121 aa15.69■□□□□ 0.1
NME3-211ENST00000568561 PPARDQ03181 441 aa15.69■□□□□ 0.1
NME3-211ENST00000568561 ALG11Q2TAA5 492 aa15.69■□□□□ 0.1
NME3-211ENST00000568561 KCTD16Q68DU8 428 aa15.69■□□□□ 0.1
NME3-211ENST00000568561 IGF2-ASQ6U949 168 aa15.69■□□□□ 0.1
NME3-211ENST00000568561 RD3Q7Z3Z2 195 aa15.69■□□□□ 0.1
NME3-211ENST00000568561 RTL3Q8N8U3 475 aaKnown RBP15.69■□□□□ 0.1
NME3-211ENST00000568561 TPCN2Q8NHX9 752 aa15.69■□□□□ 0.1
NME3-211ENST00000568561 WDR36Q8NI36 951 aaKnown RBP15.69■□□□□ 0.1
NME3-211ENST00000568561 TTC9Q92623 222 aa15.69■□□□□ 0.1
NME3-211ENST00000568561 NAT6Q93015 286 aa15.69■□□□□ 0.1
NME3-211ENST00000568561 TSACCQ96A04 125 aaPredicted RBP15.69■□□□□ 0.1
NME3-211ENST00000568561 NTAN1Q96AB6 310 aa15.69■□□□□ 0.1
NME3-211ENST00000568561 CCDC74AQ96AQ1 378 aa15.69■□□□□ 0.1
NME3-211ENST00000568561 EPB41L5Q9HCM4 733 aa15.69■□□□□ 0.1
NME3-211ENST00000568561 ADAM22Q9P0K1 906 aa15.69■□□□□ 0.1
NME3-211ENST00000568561 LHX3Q9UBR4 397 aa15.69■□□□□ 0.1
NME3-211ENST00000568561 DACH1Q9UI36 760 aa15.69■□□□□ 0.1
NME3-211ENST00000568561 DOLKQ9UPQ8 538 aa15.69■□□□□ 0.1
NME3-211ENST00000568561 UNC13CQ8NB66 2214 aa15.69■□□□□ 0.1
NME3-211ENST00000568561 CCDC187A0A096LP49 1063 aa15.68■□□□□ 0.1
NME3-211ENST00000568561 ZSCAN5CA6NGD5 496 aaPredicted RBP15.68■□□□□ 0.1
NME3-211ENST00000568561 CDRT15L2A8MXV6 281 aa15.68■□□□□ 0.1
NME3-211ENST00000568561 RASA4BC9J798 803 aa15.68■□□□□ 0.1
NME3-211ENST00000568561 CCP110O43303 1012 aa15.68■□□□□ 0.1
NME3-211ENST00000568561 RASA4O43374 803 aa15.68■□□□□ 0.1
NME3-211ENST00000568561 CREB3O43889 395 aa15.68■□□□□ 0.1
NME3-211ENST00000568561 PRKCGP05129 697 aa15.68■□□□□ 0.1
NME3-211ENST00000568561 KRT3P12035 628 aa15.68■□□□□ 0.1
NME3-211ENST00000568561 UNGP13051 313 aaPredicted RBP15.68■□□□□ 0.1
NME3-211ENST00000568561 XPAP23025 273 aaPredicted RBP15.68■□□□□ 0.1
NME3-211ENST00000568561 NSFP46459 744 aaKnown RBP15.68■□□□□ 0.1
NME3-211ENST00000568561 SKOR1P84550 965 aa15.68■□□□□ 0.1
NME3-211ENST00000568561 RAD51Q06609 339 aa15.68■□□□□ 0.1
NME3-211ENST00000568561 CLN3Q13286 438 aa15.68■□□□□ 0.1
NME3-211ENST00000568561 WSCD2Q2TBF2 565 aa15.68■□□□□ 0.1
NME3-211ENST00000568561 ZSCAN23Q3MJ62 389 aa15.68■□□□□ 0.1
NME3-211ENST00000568561 ESRP1Q6NXG1 681 aaKnown RBP15.68■□□□□ 0.1
NME3-211ENST00000568561 SCYL2Q6P3W7 929 aa15.68■□□□□ 0.1
NME3-211ENST00000568561 WDR59Q6PJI9 974 aa15.68■□□□□ 0.1
NME3-211ENST00000568561 SLFN11Q7Z7L1 901 aa15.68■□□□□ 0.1
NME3-211ENST00000568561 SDR16C5Q8N3Y7 309 aa15.68■□□□□ 0.1
NME3-211ENST00000568561 NCAPGQ9BPX3 1015 aa15.68■□□□□ 0.1
NME3-211ENST00000568561 SELENOOQ9BVL4 669 aa15.68■□□□□ 0.1
NME3-211ENST00000568561 C1QTNF7Q9BXJ2 289 aa15.68■□□□□ 0.1
NME3-211ENST00000568561 FOXP3Q9BZS1 431 aa15.68■□□□□ 0.1
NME3-211ENST00000568561 NUP62CLQ9H1M0 184 aa15.68■□□□□ 0.1
NME3-211ENST00000568561 OR1A2Q9Y585 309 aa15.68■□□□□ 0.1
NME3-211ENST00000568561 PCDHGA8Q9Y5G5 932 aa15.68■□□□□ 0.1
NME3-211ENST00000568561 MAST4O15021 2626 aa15.67■□□□□ 0.1
NME3-211ENST00000568561 HECTD1Q9ULT8 2610 aa15.67■□□□□ 0.1
NME3-211ENST00000568561 J3QKU1 62 aa15.67■□□□□ 0.1
NME3-211ENST00000568561 C6P13671 934 aa15.67■□□□□ 0.1
NME3-211ENST00000568561 HGFP14210 728 aa15.67■□□□□ 0.1
NME3-211ENST00000568561 HK3P52790 923 aa15.67■□□□□ 0.1
NME3-211ENST00000568561 LRRC14Q15048 493 aa15.67■□□□□ 0.1
NME3-211ENST00000568561 KRT31Q15323 416 aa15.67■□□□□ 0.1
NME3-211ENST00000568561 CYTH1Q15438 398 aa15.67■□□□□ 0.1
NME3-211ENST00000568561 TMEM52BQ4KMG9 183 aa15.67■□□□□ 0.1
NME3-211ENST00000568561 EFHC2Q5JST6 749 aa15.67■□□□□ 0.1
NME3-211ENST00000568561 ENPP7Q6UWV6 458 aa15.67■□□□□ 0.1
NME3-211ENST00000568561 CLEC14AQ86T13 490 aa15.67■□□□□ 0.1
NME3-211ENST00000568561 ARL14Q8N4G2 192 aa15.67■□□□□ 0.1
NME3-211ENST00000568561 ARL10Q8N8L6 244 aa15.67■□□□□ 0.1
NME3-211ENST00000568561 GRAMD1AQ96CP6 724 aa15.67■□□□□ 0.1
NME3-211ENST00000568561 PDXPQ96GD0 296 aa15.67■□□□□ 0.1
NME3-211ENST00000568561 TBATAQ96M53 351 aa15.67■□□□□ 0.1
NME3-211ENST00000568561 RETREG1Q9H6L5 497 aa15.67■□□□□ 0.1
NME3-211ENST00000568561 PCDH12Q9NPG4 1184 aa15.67■□□□□ 0.1
NME3-211ENST00000568561 SEPT11Q9NVA2 429 aaKnown RBP15.67■□□□□ 0.1
NME3-211ENST00000568561 DKK3Q9UBP4 350 aa15.67■□□□□ 0.1
NME3-211ENST00000568561 SSUH2Q9Y2M2 353 aa15.67■□□□□ 0.1
NME3-211ENST00000568561 NTN3O00634 580 aaPredicted RBP15.66■□□□□ 0.1
NME3-211ENST00000568561 PCCBP05166 539 aa15.66■□□□□ 0.1
NME3-211ENST00000568561 RPLP0P05388 317 aaKnown RBP15.66■□□□□ 0.1
NME3-211ENST00000568561 CTSEP14091 401 aa15.66■□□□□ 0.1
NME3-211ENST00000568561 CCL7P80098 99 aa15.66■□□□□ 0.1
NME3-211ENST00000568561 SERINC3Q13530 473 aa15.66■□□□□ 0.1
NME3-211ENST00000568561 INPP5AQ14642 412 aa15.66■□□□□ 0.1
NME3-211ENST00000568561 NFATC4Q14934 902 aa15.66■□□□□ 0.1
NME3-211ENST00000568561 CLEC16AQ2KHT3 1053 aa15.66■□□□□ 0.1
NME3-211ENST00000568561 TRIM72Q6ZMU5 477 aa15.66■□□□□ 0.1
NME3-211ENST00000568561 CCDC81Q6ZN84 652 aa15.66■□□□□ 0.1
NME3-211ENST00000568561 ZSWIM9Q86XI8 627 aa15.66■□□□□ 0.1
NME3-211ENST00000568561 JAMLQ86YT9 394 aa15.66■□□□□ 0.1
NME3-211ENST00000568561 SFTPA2Q8IWL1 248 aa15.66■□□□□ 0.1
NME3-211ENST00000568561 FSTL5Q8N475 847 aaPredicted RBP15.66■□□□□ 0.1
NME3-211ENST00000568561 SNRNP27Q8WVK2 155 aaKnown RBP15.66■□□□□ 0.1
NME3-211ENST00000568561 WBP1Q96G27 269 aa15.66■□□□□ 0.1
NME3-211ENST00000568561 CELF6Q96J87 481 aaKnown RBP15.66■□□□□ 0.1
NME3-211ENST00000568561 MCEEQ96PE7 176 aa15.66■□□□□ 0.1
NME3-211ENST00000568561 CPEB1Q9BZB8 566 aaKnown RBP15.66■□□□□ 0.1
NME3-211ENST00000568561 EDEM3Q9BZQ6 932 aa15.66■□□□□ 0.1
NME3-211ENST00000568561 GPATCH2LQ9NWQ4 482 aa15.66■□□□□ 0.1
NME3-211ENST00000568561 GPR34Q9UPC5 381 aa15.66■□□□□ 0.1
NME3-211ENST00000568561 MFHAS1Q9Y4C4 1052 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms