RNA–Protein interactions for RNA: ENST00000567966.1

LINC01228-201, Transcript of long intergenic non-protein coding RNA 1228, humanhuman

TSL 3 BASIC

Gene LINC01228, Length 623 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01228-201ENST00000567966 SH3BP5O60239 455 aa11.19□□□□□ -0.62
LINC01228-201ENST00000567966 OPHN1O60890 802 aa11.19□□□□□ -0.62
LINC01228-201ENST00000567966 ERLIN1O75477 346 aa11.19□□□□□ -0.62
LINC01228-201ENST00000567966 IGSF6O95976 241 aa11.19□□□□□ -0.62
LINC01228-201ENST00000567966 SYPP08247 313 aa11.19□□□□□ -0.62
LINC01228-201ENST00000567966 ACADMP11310 421 aa11.19□□□□□ -0.62
LINC01228-201ENST00000567966 CCNB1P14635 433 aa11.19□□□□□ -0.62
LINC01228-201ENST00000567966 CHRNA3P32297 505 aa11.19□□□□□ -0.62
LINC01228-201ENST00000567966 SUOXP51687 545 aa11.19□□□□□ -0.62
LINC01228-201ENST00000567966 RHOAP61586 193 aa11.19□□□□□ -0.62
LINC01228-201ENST00000567966 RPS14P62263 151 aaKnown RBP11.19□□□□□ -0.62
LINC01228-201ENST00000567966 GRIK2Q13002 908 aa11.19□□□□□ -0.62
LINC01228-201ENST00000567966 KLF1Q13351 362 aaPredicted RBP11.19□□□□□ -0.62
LINC01228-201ENST00000567966 NUMA1Q14980 2115 aa11.19□□□□□ -0.62
LINC01228-201ENST00000567966 BRD3Q15059 726 aa11.19□□□□□ -0.62
LINC01228-201ENST00000567966 TTC31Q49AM3 519 aaPredicted RBP11.19□□□□□ -0.62
LINC01228-201ENST00000567966 WDR45BQ5MNZ6 344 aa11.19□□□□□ -0.62
LINC01228-201ENST00000567966 SEL1L2Q5TEA6 688 aa11.19□□□□□ -0.62
LINC01228-201ENST00000567966 KAZNQ674X7 775 aa11.19□□□□□ -0.62
LINC01228-201ENST00000567966 DPY19L3Q6ZPD9 716 aa11.19□□□□□ -0.62
LINC01228-201ENST00000567966 Q6ZVU0 165 aa11.19□□□□□ -0.62
LINC01228-201ENST00000567966 RABEPKQ7Z6M1 372 aa11.19□□□□□ -0.62
LINC01228-201ENST00000567966 CCDC13Q8IYE1 715 aa11.19□□□□□ -0.62
LINC01228-201ENST00000567966 STK40Q8N2I9 435 aa11.19□□□□□ -0.62
LINC01228-201ENST00000567966 HDDC3Q8N4P3 179 aa11.19□□□□□ -0.62
LINC01228-201ENST00000567966 ZCCHC9Q8N567 271 aaKnown RBP11.19□□□□□ -0.62
LINC01228-201ENST00000567966 CCNYQ8ND76 341 aa11.19□□□□□ -0.62
LINC01228-201ENST00000567966 LRRN4CLQ8ND94 238 aa11.19□□□□□ -0.62
LINC01228-201ENST00000567966 CADM4Q8NFZ8 388 aa11.19□□□□□ -0.62
LINC01228-201ENST00000567966 C1orf216Q8TAB5 229 aa11.19□□□□□ -0.62
LINC01228-201ENST00000567966 TFB1MQ8WVM0 346 aaKnown RBP11.19□□□□□ -0.62
LINC01228-201ENST00000567966 ZNF641Q96N77 438 aaPredicted RBP11.19□□□□□ -0.62
LINC01228-201ENST00000567966 TUBGCP5Q96RT8 1024 aa11.19□□□□□ -0.62
LINC01228-201ENST00000567966 VAT1Q99536 393 aa11.19□□□□□ -0.62
LINC01228-201ENST00000567966 SCNM1Q9BWG6 230 aa11.19□□□□□ -0.62
LINC01228-201ENST00000567966 HEMGNQ9BXL5 484 aa11.19□□□□□ -0.62
LINC01228-201ENST00000567966 PCED1AQ9H1Q7 454 aa11.19□□□□□ -0.62
LINC01228-201ENST00000567966 C6orf106Q9H6K1 298 aaPredicted RBP11.19□□□□□ -0.62
LINC01228-201ENST00000567966 IL21RQ9HBE5 538 aa11.19□□□□□ -0.62
LINC01228-201ENST00000567966 DNAAF2Q9NVR5 837 aaKnown RBP11.19□□□□□ -0.62
LINC01228-201ENST00000567966 EIF2B4Q9UI10 523 aaKnown RBP11.19□□□□□ -0.62
LINC01228-201ENST00000567966 TTC7AQ9ULT0 858 aaPredicted RBP11.19□□□□□ -0.62
LINC01228-201ENST00000567966 TPX2Q9ULW0 747 aaKnown RBP11.19□□□□□ -0.62
LINC01228-201ENST00000567966 PACSIN2Q9UNF0 486 aaPredicted RBP11.19□□□□□ -0.62
LINC01228-201ENST00000567966 LHX6Q9UPM6 363 aa11.19□□□□□ -0.62
LINC01228-201ENST00000567966 NCKAP1Q9Y2A7 1128 aa11.19□□□□□ -0.62
LINC01228-201ENST00000567966 KMT2BQ9UMN6 2715 aaPredicted RBP11.19□□□□□ -0.62
LINC01228-201ENST00000567966 FRYQ5TBA9 3013 aa11.19□□□□□ -0.62
LINC01228-201ENST00000567966 A0A1B0GTW7 788 aa11.18□□□□□ -0.62
LINC01228-201ENST00000567966 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.18□□□□□ -0.62
LINC01228-201ENST00000567966 A0A1W2PQ67 120 aa11.18□□□□□ -0.62
LINC01228-201ENST00000567966 UPK3BL1B0FP48 263 aa11.18□□□□□ -0.62
LINC01228-201ENST00000567966 UPK3BL2E5RIL1 263 aa11.18□□□□□ -0.62
LINC01228-201ENST00000567966 SLC7A4O43246 635 aa11.18□□□□□ -0.62
LINC01228-201ENST00000567966 DNTTP04053 509 aa11.18□□□□□ -0.62
LINC01228-201ENST00000567966 GNSP15586 552 aa11.18□□□□□ -0.62
LINC01228-201ENST00000567966 SLC8A1P32418 973 aa11.18□□□□□ -0.62
LINC01228-201ENST00000567966 MMP13P45452 471 aa11.18□□□□□ -0.62
LINC01228-201ENST00000567966 DNA2P51530 1060 aa11.18□□□□□ -0.62
LINC01228-201ENST00000567966 AP1S1P61966 158 aa11.18□□□□□ -0.62
LINC01228-201ENST00000567966 DYNLT1P63172 113 aa11.18□□□□□ -0.62
LINC01228-201ENST00000567966 IFI35P80217 286 aaPredicted RBP11.18□□□□□ -0.62
LINC01228-201ENST00000567966 SIM1P81133 766 aaPredicted RBP11.18□□□□□ -0.62
LINC01228-201ENST00000567966 ADCY2Q08462 1091 aa11.18□□□□□ -0.62
LINC01228-201ENST00000567966 SLC10A7Q0GE19 358 aa11.18□□□□□ -0.62
LINC01228-201ENST00000567966 PRKD1Q15139 912 aaPredicted RBP11.18□□□□□ -0.62
LINC01228-201ENST00000567966 CST6Q15828 149 aa11.18□□□□□ -0.62
LINC01228-201ENST00000567966 ALG1LQ6GMV1 187 aa11.18□□□□□ -0.62
LINC01228-201ENST00000567966 FBXO38Q6PIJ6 1188 aa11.18□□□□□ -0.62
LINC01228-201ENST00000567966 SLC13A5Q86YT5 568 aaPredicted RBP11.18□□□□□ -0.62
LINC01228-201ENST00000567966 TP53INP2Q8IXH6 220 aa11.18□□□□□ -0.62
LINC01228-201ENST00000567966 FAM131CQ96AQ9 280 aa11.18□□□□□ -0.62
LINC01228-201ENST00000567966 PPP1R16AQ96I34 528 aa11.18□□□□□ -0.62
LINC01228-201ENST00000567966 NAP1L3Q99457 506 aaPredicted RBP11.18□□□□□ -0.62
LINC01228-201ENST00000567966 IL12RB2Q99665 862 aa11.18□□□□□ -0.62
LINC01228-201ENST00000567966 CINPQ9BW66 212 aaPredicted RBP11.18□□□□□ -0.62
LINC01228-201ENST00000567966 HDAC8Q9BY41 377 aa11.18□□□□□ -0.62
LINC01228-201ENST00000567966 KDM4CQ9H3R0 1056 aa11.18□□□□□ -0.62
LINC01228-201ENST00000567966 SLC32A1Q9H598 525 aa11.18□□□□□ -0.62
LINC01228-201ENST00000567966 DKK3Q9UBP4 350 aa11.18□□□□□ -0.62
LINC01228-201ENST00000567966 IL36AQ9UHA7 158 aa11.18□□□□□ -0.62
LINC01228-201ENST00000567966 TRHDEQ9UKU6 1024 aa11.18□□□□□ -0.62
LINC01228-201ENST00000567966 FZD4Q9ULV1 537 aa11.18□□□□□ -0.62
LINC01228-201ENST00000567966 FCF1Q9Y324 198 aaKnown RBP11.18□□□□□ -0.62
LINC01228-201ENST00000567966 TMEM131Q92545 1883 aa11.18□□□□□ -0.62
LINC01228-201ENST00000567966 NYNRINQ9P2P1 1898 aaKnown RBP11.17□□□□□ -0.62
LINC01228-201ENST00000567966 PCNX2A6NKB5 2137 aa11.17□□□□□ -0.62
LINC01228-201ENST00000567966 CCDC151A5D8V7 595 aa11.17□□□□□ -0.62
LINC01228-201ENST00000567966 BCAT2O15382 392 aaPredicted RBP11.17□□□□□ -0.62
LINC01228-201ENST00000567966 IL1BP01584 269 aa11.17□□□□□ -0.62
LINC01228-201ENST00000567966 PROS1P07225 676 aa11.17□□□□□ -0.62
LINC01228-201ENST00000567966 STIP1P31948 543 aaKnown RBP11.17□□□□□ -0.62
LINC01228-201ENST00000567966 CCNHP51946 323 aaPredicted RBP11.17□□□□□ -0.62
LINC01228-201ENST00000567966 POLR2LP62875 67 aaKnown RBP11.17□□□□□ -0.62
LINC01228-201ENST00000567966 AP1B1Q10567 949 aa11.17□□□□□ -0.62
LINC01228-201ENST00000567966 ZNF211Q13398 564 aaPredicted RBP11.17□□□□□ -0.62
LINC01228-201ENST00000567966 ZNF235Q14590 738 aa11.17□□□□□ -0.62
LINC01228-201ENST00000567966 NOMO1Q15155 1222 aa11.17□□□□□ -0.62
LINC01228-201ENST00000567966 TEX44Q53QW1 395 aa11.17□□□□□ -0.62
LINC01228-201ENST00000567966 SLC45A4Q5BKX6 768 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms